RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 M0QY20 66 aa3.27□□□□□ -1.89
CCDC39-205ENST00000485055 ABCA13Q86UQ4 5058 aa3.27□□□□□ -1.89
CCDC39-205ENST00000485055 H3BPC8 53 aa3.27□□□□□ -1.89
CCDC39-205ENST00000485055 BAGE2Q86Y30 109 aa3.27□□□□□ -1.89
CCDC39-205ENST00000485055 Q8N9P0 234 aaPredicted RBP3.27□□□□□ -1.89
CCDC39-205ENST00000485055 TRAPPC1Q9Y5R8 145 aa3.27□□□□□ -1.89
CCDC39-205ENST00000485055 PANO1I0J062 215 aa3.26□□□□□ -1.89
CCDC39-205ENST00000485055 ENHOQ6UWT2 76 aa3.26□□□□□ -1.89
CCDC39-205ENST00000485055 SCO2A0A1W2PP80 73 aa3.26□□□□□ -1.89
CCDC39-205ENST00000485055 H3BVH4 76 aa3.26□□□□□ -1.89
CCDC39-205ENST00000485055 FXYD2P54710 66 aa3.26□□□□□ -1.89
CCDC39-205ENST00000485055 C9orf163Q8N9P6 203 aa3.25□□□□□ -1.89
CCDC39-205ENST00000485055 MOBPQ13875 183 aa3.25□□□□□ -1.89
CCDC39-205ENST00000485055 TIMM21Q9BVV7 248 aa3.25□□□□□ -1.89
CCDC39-205ENST00000485055 TRAV22A0A0B4J277 110 aa3.24□□□□□ -1.89
CCDC39-205ENST00000485055 NDUFAF8A1L188 74 aa3.24□□□□□ -1.89
CCDC39-205ENST00000485055 C3orf79P0CE67 100 aa3.24□□□□□ -1.89
CCDC39-205ENST00000485055 Q5VSD8 79 aa3.24□□□□□ -1.89
CCDC39-205ENST00000485055 C20orf197Q8N268 126 aa3.24□□□□□ -1.89
CCDC39-205ENST00000485055 TRBV25-1A0A075B6N4 114 aa3.23□□□□□ -1.89
CCDC39-205ENST00000485055 FAM168BA1KXE4 195 aa3.23□□□□□ -1.89
CCDC39-205ENST00000485055 PPP1R17O96001 155 aa3.23□□□□□ -1.89
CCDC39-205ENST00000485055 DEFB116Q30KQ4 102 aa3.23□□□□□ -1.89
CCDC39-205ENST00000485055 DEFB104AQ8WTQ1 72 aa3.23□□□□□ -1.89
CCDC39-205ENST00000485055 NDUFC1O43677 76 aa3.23□□□□□ -1.89
CCDC39-205ENST00000485055 LINC00643Q86TS7 51 aa3.23□□□□□ -1.89
CCDC39-205ENST00000485055 CDC42SE1Q9NRR8 79 aa3.23□□□□□ -1.89
CCDC39-205ENST00000485055 TMSB15BA0A087X1C1 80 aa3.22□□□□□ -1.89
CCDC39-205ENST00000485055 A0A096LNJ9 63 aa3.22□□□□□ -1.89
CCDC39-205ENST00000485055 GVQW2A0A096LPI5 108 aaPredicted RBP3.22□□□□□ -1.89
CCDC39-205ENST00000485055 POLR2KP53803 58 aaKnown RBP3.22□□□□□ -1.89
CCDC39-205ENST00000485055 Q5VV11 94 aa3.22□□□□□ -1.89
CCDC39-205ENST00000485055 PLAC8Q9NZF1 115 aa3.22□□□□□ -1.89
CCDC39-205ENST00000485055 IGLV10-54A0A075B6I4 117 aa3.22□□□□□ -1.89
CCDC39-205ENST00000485055 LINC01600Q96MT4 127 aa3.22□□□□□ -1.89
CCDC39-205ENST00000485055 FAT3Q8TDW7 4589 aa3.22□□□□□ -1.89
CCDC39-205ENST00000485055 F8WEM9 126 aa3.22□□□□□ -1.89
CCDC39-205ENST00000485055 PSCAO43653 123 aa3.22□□□□□ -1.89
CCDC39-205ENST00000485055 KLKP1Q107X0 134 aa3.22□□□□□ -1.89
CCDC39-205ENST00000485055 TRBV10-3A0A0K0K1G6 114 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 SDHAF1A6NFY7 115 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 CHKB-CPT1BH3BT56 60 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 IGHV3-30P01768 117 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 IGHV3-33P01772 117 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 IGHV3-30-5P0DP03 117 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 COX8AP10176 69 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 SPANXA2-OT1Q8N9U9 137 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 IFI27L1Q96BM0 104 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 TMEM170BQ5T4T1 132 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 GNG13Q9P2W3 67 aa3.21□□□□□ -1.9
CCDC39-205ENST00000485055 SMIM27A0A1W2PRY6 76 aa3.2□□□□□ -1.9
CCDC39-205ENST00000485055 PRO1854Q9UHT4 67 aa3.2□□□□□ -1.9
CCDC39-205ENST00000485055 K7EMI3 77 aa3.2□□□□□ -1.9
CCDC39-205ENST00000485055 KRTAP25-1Q3LHN0 102 aa3.2□□□□□ -1.9
CCDC39-205ENST00000485055 SPACA4Q8TDM5 124 aa3.2□□□□□ -1.9
CCDC39-205ENST00000485055 C14orf132Q9NPU4 83 aa3.2□□□□□ -1.9
CCDC39-205ENST00000485055 KLK12Q9UKR0 248 aa3.2□□□□□ -1.9
CCDC39-205ENST00000485055 I3L3M4 83 aa3.19□□□□□ -1.9
CCDC39-205ENST00000485055 ACYP1P07311 99 aa3.19□□□□□ -1.9
CCDC39-205ENST00000485055 CYP4F30PQ9H0H9 118 aa3.19□□□□□ -1.9
CCDC39-205ENST00000485055 V9GYV3 84 aa3.19□□□□□ -1.9
CCDC39-205ENST00000485055 FAT1Q14517 4588 aa3.19□□□□□ -1.9
CCDC39-205ENST00000485055 IGHV3-64A0A075B6Q5 118 aa3.19□□□□□ -1.9
CCDC39-205ENST00000485055 LINC01546A6NGU7 62 aa3.19□□□□□ -1.9
CCDC39-205ENST00000485055 ZNF861PO60384 105 aa3.19□□□□□ -1.9
CCDC39-205ENST00000485055 Q8N3U1 123 aa3.19□□□□□ -1.9
CCDC39-205ENST00000485055 CSAG1Q6PB30 78 aa3.18□□□□□ -1.9
CCDC39-205ENST00000485055 A0A1B0GUT8 65 aa3.18□□□□□ -1.9
CCDC39-205ENST00000485055 FAM74A4Q5TZK3 123 aa3.18□□□□□ -1.9
CCDC39-205ENST00000485055 LINC00483Q53H64 154 aa3.18□□□□□ -1.9
CCDC39-205ENST00000485055 Q5W150 140 aa3.18□□□□□ -1.9
CCDC39-205ENST00000485055 CDC42SE2Q9NRR3 84 aa3.18□□□□□ -1.9
CCDC39-205ENST00000485055 IGKV2D-24A0A075B6R9 120 aa3.17□□□□□ -1.9
CCDC39-205ENST00000485055 IGLV4-60A0A075B6I1 120 aa3.17□□□□□ -1.9
CCDC39-205ENST00000485055 MYCBP2O75592 4640 aa3.17□□□□□ -1.9
CCDC39-205ENST00000485055 ANGP03950 147 aaKnown RBP3.17□□□□□ -1.9
CCDC39-205ENST00000485055 SLPIP03973 132 aa3.17□□□□□ -1.9
CCDC39-205ENST00000485055 IGLV7-43P04211 117 aa3.17□□□□□ -1.9
CCDC39-205ENST00000485055 BAGE3Q86Y29 109 aa3.17□□□□□ -1.9
CCDC39-205ENST00000485055 TMEM254Q8TBM7 123 aa3.17□□□□□ -1.9
CCDC39-205ENST00000485055 LINC01549A6NIU2 74 aa3.16□□□□□ -1.9
CCDC39-205ENST00000485055 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
CCDC39-205ENST00000485055 LINC00959A0A1B0GUT2 108 aa3.16□□□□□ -1.9
CCDC39-205ENST00000485055 LINC00167Q96N53 147 aa3.16□□□□□ -1.9
CCDC39-205ENST00000485055 ERC2-IT1O76042 136 aa3.15□□□□□ -1.9
CCDC39-205ENST00000485055 RPL37AP61513 92 aaKnown RBP3.15□□□□□ -1.9
CCDC39-205ENST00000485055 HIGD2BQ4VC39 106 aa3.15□□□□□ -1.9
CCDC39-205ENST00000485055 UBE2D4Q9Y2X8 147 aa3.15□□□□□ -1.9
CCDC39-205ENST00000485055 BAALC-AS2P0C853 105 aa3.15□□□□□ -1.91
CCDC39-205ENST00000485055 TNXBP22105 4242 aa3.15□□□□□ -1.91
CCDC39-205ENST00000485055 KRTAP10-8P60410 259 aa3.14□□□□□ -1.91
CCDC39-205ENST00000485055 SPINK6Q6UWN8 80 aa3.14□□□□□ -1.91
CCDC39-205ENST00000485055 A0A1B0GU33 70 aa3.14□□□□□ -1.91
CCDC39-205ENST00000485055 HIGD1CA8MV81 97 aa3.14□□□□□ -1.91
CCDC39-205ENST00000485055 MGPP08493 103 aa3.14□□□□□ -1.91
CCDC39-205ENST00000485055 LIMD2Q9BT23 127 aa3.14□□□□□ -1.91
CCDC39-205ENST00000485055 A0A087WSZ3 146 aa3.13□□□□□ -1.91
CCDC39-205ENST00000485055 MYMXA0A1B0GTQ4 84 aa3.13□□□□□ -1.91
CCDC39-205ENST00000485055 ZNF815PA8K554 130 aa3.13□□□□□ -1.91
CCDC39-205ENST00000485055 UBE2D1P51668 147 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms