RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 RPL37AP61513 92 aaKnown RBP8.56□□□□□ -1.04
SMAD9-204ENST00000483941 LINC01600Q96MT4 127 aa8.56□□□□□ -1.04
SMAD9-204ENST00000483941 TEX49A0A1B0GTD5 131 aa8.55□□□□□ -1.04
SMAD9-204ENST00000483941 IGLV5-48A0A075B6I7 105 aa8.53□□□□□ -1.04
SMAD9-204ENST00000483941 PLA2G1BP04054 148 aaKnown RBP8.53□□□□□ -1.04
SMAD9-204ENST00000483941 PRO0461Q9UI25 63 aa8.53□□□□□ -1.04
SMAD9-204ENST00000483941 DEFB105AQ8NG35 78 aa8.52□□□□□ -1.05
SMAD9-204ENST00000483941 JMJD7-PLA2G4BH0Y9G9 81 aa8.51□□□□□ -1.05
SMAD9-204ENST00000483941 ERC2-IT1O76042 136 aa8.51□□□□□ -1.05
SMAD9-204ENST00000483941 SPINK6Q6UWN8 80 aa8.5□□□□□ -1.05
SMAD9-204ENST00000483941 MTURNQ8N3F0 131 aa8.5□□□□□ -1.05
SMAD9-204ENST00000483941 LAMTOR3Q9UHA4 124 aa8.5□□□□□ -1.05
SMAD9-204ENST00000483941 SPRR1BP22528 89 aa8.49□□□□□ -1.05
SMAD9-204ENST00000483941 C21orf62-AS1Q17RA5 79 aa8.49□□□□□ -1.05
SMAD9-204ENST00000483941 F8WEM9 126 aa8.48□□□□□ -1.05
SMAD9-204ENST00000483941 TEN1Q86WV5 123 aa8.48□□□□□ -1.05
SMAD9-204ENST00000483941 Q8N377 158 aa8.48□□□□□ -1.05
SMAD9-204ENST00000483941 ST20-AS1Q8NBB2 130 aa8.48□□□□□ -1.05
SMAD9-204ENST00000483941 SMCPP49901 116 aaPredicted RBP8.47□□□□□ -1.05
SMAD9-204ENST00000483941 NDUFV3P56181 108 aaKnown RBP8.47□□□□□ -1.05
SMAD9-204ENST00000483941 GAGE2AQ6NT46 116 aa8.47□□□□□ -1.05
SMAD9-204ENST00000483941 SPRR4Q96PI1 79 aa8.47□□□□□ -1.05
SMAD9-204ENST00000483941 LINC01547P58512 204 aaPredicted RBP8.46□□□□□ -1.06
SMAD9-204ENST00000483941 PDE6GP18545 87 aa8.45□□□□□ -1.06
SMAD9-204ENST00000483941 RBM3P98179 157 aaKnown RBP8.45□□□□□ -1.06
SMAD9-204ENST00000483941 ETDBQ3ZM63 59 aa8.45□□□□□ -1.06
SMAD9-204ENST00000483941 LINC00483Q53H64 154 aa8.45□□□□□ -1.06
SMAD9-204ENST00000483941 RNF213Q63HN8 5207 aa8.45□□□□□ -1.06
SMAD9-204ENST00000483941 DSCR8Q96T75 97 aa8.44□□□□□ -1.06
SMAD9-204ENST00000483941 FAM229BQ4G0N7 80 aa8.42□□□□□ -1.06
SMAD9-204ENST00000483941 OBSCN-AS1Q96MR7 158 aa8.42□□□□□ -1.06
SMAD9-204ENST00000483941 J3QR89 54 aa8.41□□□□□ -1.06
SMAD9-204ENST00000483941 OXTP01178 125 aa8.41□□□□□ -1.06
SMAD9-204ENST00000483941 TNXBP22105 4242 aa8.4□□□□□ -1.06
SMAD9-204ENST00000483941 Q6JHZ5 121 aa8.4□□□□□ -1.06
SMAD9-204ENST00000483941 SMIM29Q86T20 159 aa8.39□□□□□ -1.07
SMAD9-204ENST00000483941 LRP2P98164 4655 aa8.38□□□□□ -1.07
SMAD9-204ENST00000483941 IGLV8-61A0A075B6I0 122 aa8.37□□□□□ -1.07
SMAD9-204ENST00000483941 LOC110117498A0A087WWA1 95 aa8.37□□□□□ -1.07
SMAD9-204ENST00000483941 CRYGAP11844 174 aa8.36□□□□□ -1.07
SMAD9-204ENST00000483941 KRTAP10-4P60372 401 aaPredicted RBP8.36□□□□□ -1.07
SMAD9-204ENST00000483941 C3orf22Q8N5N4 141 aa8.36□□□□□ -1.07
SMAD9-204ENST00000483941 C9orf153Q5TBE3 101 aa8.35□□□□□ -1.07
SMAD9-204ENST00000483941 C14orf132Q9NPU4 83 aa8.35□□□□□ -1.07
SMAD9-204ENST00000483941 TRBV7-4A0A0J9YYF1 115 aa8.34□□□□□ -1.07
SMAD9-204ENST00000483941 A0A1B0GW54 56 aa8.34□□□□□ -1.07
SMAD9-204ENST00000483941 SSBP3-AS1Q7Z2R9 100 aa8.34□□□□□ -1.07
SMAD9-204ENST00000483941 Q8NBF4 154 aa8.34□□□□□ -1.07
SMAD9-204ENST00000483941 IGLV9-49A0A0B4J1Y8 123 aa8.33□□□□□ -1.08
SMAD9-204ENST00000483941 K7ERU9 68 aa8.33□□□□□ -1.08
SMAD9-204ENST00000483941 A0A1B0GV72 72 aa8.32□□□□□ -1.08
SMAD9-204ENST00000483941 CCKP06307 115 aa8.32□□□□□ -1.08
SMAD9-204ENST00000483941 ACYP1P07311 99 aa8.31□□□□□ -1.08
SMAD9-204ENST00000483941 Q6ZQT0 140 aa8.31□□□□□ -1.08
SMAD9-204ENST00000483941 KRTAP1-4P0C5Y4 121 aa8.3□□□□□ -1.08
SMAD9-204ENST00000483941 ANAPC11Q9NYG5 84 aa8.3□□□□□ -1.08
SMAD9-204ENST00000483941 FAM240AA0A1B0GVK7 77 aa8.29□□□□□ -1.08
SMAD9-204ENST00000483941 MOBPQ13875 183 aa8.29□□□□□ -1.08
SMAD9-204ENST00000483941 IGFL1Q6UW32 110 aa8.28□□□□□ -1.08
SMAD9-204ENST00000483941 Q6Q795 121 aa8.27□□□□□ -1.09
SMAD9-204ENST00000483941 VPS25Q9BRG1 176 aa8.27□□□□□ -1.09
SMAD9-204ENST00000483941 CD164Q04900 197 aa8.26□□□□□ -1.09
SMAD9-204ENST00000483941 TYMSOSQ8TAI1 123 aa8.26□□□□□ -1.09
SMAD9-204ENST00000483941 A0A087X002 238 aa8.24□□□□□ -1.09
SMAD9-204ENST00000483941 C4orf48Q5BLP8 95 aa8.24□□□□□ -1.09
SMAD9-204ENST00000483941 A0A1W2PNM2 257 aa8.22□□□□□ -1.09
SMAD9-204ENST00000483941 MT1HL1P0DM35 61 aa8.22□□□□□ -1.09
SMAD9-204ENST00000483941 SPAG11AQ6PDA7 123 aa8.22□□□□□ -1.09
SMAD9-204ENST00000483941 KRTAP13-2Q52LG2 175 aa8.21□□□□□ -1.1
SMAD9-204ENST00000483941 SS18L2Q9UHA2 77 aa8.21□□□□□ -1.1
SMAD9-204ENST00000483941 PRR26Q8N8Z3 221 aa8.2□□□□□ -1.1
SMAD9-204ENST00000483941 UBL5Q9BZL1 73 aa8.2□□□□□ -1.1
SMAD9-204ENST00000483941 TRBV7-7A0A0K0K1E9 115 aa8.19□□□□□ -1.1
SMAD9-204ENST00000483941 SPINK1P00995 79 aa8.17□□□□□ -1.1
SMAD9-204ENST00000483941 A0A087WSZ3 146 aa8.16□□□□□ -1.1
SMAD9-204ENST00000483941 NREPQ16612 68 aa8.16□□□□□ -1.1
SMAD9-204ENST00000483941 LINC00304Q8N9R0 145 aa8.16□□□□□ -1.1
SMAD9-204ENST00000483941 LIMD2Q9BT23 127 aa8.16□□□□□ -1.1
SMAD9-204ENST00000483941 RPS29P62273 56 aaKnown RBP8.15□□□□□ -1.1
SMAD9-204ENST00000483941 LINC00846Q9NV44 126 aa8.15□□□□□ -1.1
SMAD9-204ENST00000483941 A0A0G2JQZ4 141 aa8.14□□□□□ -1.11
SMAD9-204ENST00000483941 HRCT1Q6UXD1 115 aa8.14□□□□□ -1.11
SMAD9-204ENST00000483941 Q5XG85 94 aa8.13□□□□□ -1.11
SMAD9-204ENST00000483941 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
SMAD9-204ENST00000483941 LINC00643Q86TS7 51 aa8.11□□□□□ -1.11
SMAD9-204ENST00000483941 ASB16-AS1Q495Z4 193 aa8.1□□□□□ -1.11
SMAD9-204ENST00000483941 ATP5EP2Q5VTU8 51 aa8.1□□□□□ -1.11
SMAD9-204ENST00000483941 Q6ZVQ6 151 aa8.1□□□□□ -1.11
SMAD9-204ENST00000483941 J3KT08 172 aa8.09□□□□□ -1.11
SMAD9-204ENST00000483941 BPY2O14599 106 aa8.06□□□□□ -1.12
SMAD9-204ENST00000483941 CDIP1Q9H305 208 aa8.06□□□□□ -1.12
SMAD9-204ENST00000483941 CXCL6P80162 114 aa8.05□□□□□ -1.12
SMAD9-204ENST00000483941 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
SMAD9-204ENST00000483941 LPAP08519 4548 aa8.04□□□□□ -1.12
SMAD9-204ENST00000483941 LINC00472Q9H8W2 130 aa8.03□□□□□ -1.12
SMAD9-204ENST00000483941 NDUFB1O75438 58 aa8.01□□□□□ -1.13
SMAD9-204ENST00000483941 IGKV4-1P06312 121 aa7.99□□□□□ -1.13
SMAD9-204ENST00000483941 IMUPQ9GZP8 106 aa7.98□□□□□ -1.13
SMAD9-204ENST00000483941 IGKV3D-7A0A0C4DH55 119 aa7.96□□□□□ -1.14
SMAD9-204ENST00000483941 A8MWP4 228 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms