RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 NDUFA5Q16718 116 aa6.39□□□□□ -1.39
UBR4-213ENST00000483922 CLEC2BQ92478 149 aa6.39□□□□□ -1.39
UBR4-213ENST00000483922 OCIAD2Q56VL3 154 aa6.38□□□□□ -1.39
UBR4-213ENST00000483922 MPLKIPQ8TAP9 179 aa6.38□□□□□ -1.39
UBR4-213ENST00000483922 TRBV20-1A0A075B6N2 111 aa6.37□□□□□ -1.39
UBR4-213ENST00000483922 Q6JHZ5 121 aa6.37□□□□□ -1.39
UBR4-213ENST00000483922 LINC00575Q6W349 94 aa6.37□□□□□ -1.39
UBR4-213ENST00000483922 COLCA2A8K830 154 aa6.36□□□□□ -1.39
UBR4-213ENST00000483922 F8WEM9 126 aa6.36□□□□□ -1.39
UBR4-213ENST00000483922 Q6ZQY7 126 aa6.36□□□□□ -1.39
UBR4-213ENST00000483922 NHP2Q9NX24 153 aaKnown RBP6.36□□□□□ -1.39
UBR4-213ENST00000483922 LST1O00453 97 aa6.35□□□□□ -1.39
UBR4-213ENST00000483922 IFITM1P13164 125 aa6.35□□□□□ -1.39
UBR4-213ENST00000483922 HRES1P13985 223 aa6.35□□□□□ -1.39
UBR4-213ENST00000483922 ANKRD39Q53RE8 183 aa6.35□□□□□ -1.39
UBR4-213ENST00000483922 KRTAP6-3Q3LI67 103 aa6.34□□□□□ -1.39
UBR4-213ENST00000483922 PET117Q6UWS5 81 aa6.33□□□□□ -1.4
UBR4-213ENST00000483922 SCGB1D4Q6XE38 83 aa6.33□□□□□ -1.4
UBR4-213ENST00000483922 TRAV13-2A0A0B4J235 113 aa6.32□□□□□ -1.4
UBR4-213ENST00000483922 SLC7A5P1Q8MH63 180 aa6.32□□□□□ -1.4
UBR4-213ENST00000483922 hADV29S1A0JD25 119 aa6.31□□□□□ -1.4
UBR4-213ENST00000483922 H3BUT2 72 aa6.31□□□□□ -1.4
UBR4-213ENST00000483922 C3orf79P0CE67 100 aa6.31□□□□□ -1.4
UBR4-213ENST00000483922 DSCR10P59022 87 aa6.31□□□□□ -1.4
UBR4-213ENST00000483922 Q6ZVH6 145 aa6.3□□□□□ -1.4
UBR4-213ENST00000483922 FAM236DA0A1B0GTK5 79 aa6.29□□□□□ -1.4
UBR4-213ENST00000483922 FAM236CP0DP71 79 aa6.29□□□□□ -1.4
UBR4-213ENST00000483922 NEBP20929 6669 aa6.29□□□□□ -1.4
UBR4-213ENST00000483922 NOTCH2NLQ7Z3S9 236 aa6.29□□□□□ -1.4
UBR4-213ENST00000483922 HIST1H2BKO60814 126 aa6.28□□□□□ -1.4
UBR4-213ENST00000483922 HIST1H2BJP06899 126 aa6.28□□□□□ -1.4
UBR4-213ENST00000483922 HIST1H2BOP23527 126 aa6.28□□□□□ -1.4
UBR4-213ENST00000483922 HIST1H2BBP33778 126 aa6.28□□□□□ -1.4
UBR4-213ENST00000483922 HIST1H2BDP58876 126 aa6.28□□□□□ -1.4
UBR4-213ENST00000483922 HIST1H2BCP62807 126 aa6.28□□□□□ -1.4
UBR4-213ENST00000483922 HIST2H2BEQ16778 126 aa6.28□□□□□ -1.4
UBR4-213ENST00000483922 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.28□□□□□ -1.4
UBR4-213ENST00000483922 HIST1H2BHQ93079 126 aa6.28□□□□□ -1.4
UBR4-213ENST00000483922 HIST1H2BNQ99877 126 aa6.28□□□□□ -1.4
UBR4-213ENST00000483922 HIST1H2BMQ99879 126 aa6.28□□□□□ -1.4
UBR4-213ENST00000483922 COPS9Q8WXC6 57 aa6.27□□□□□ -1.41
UBR4-213ENST00000483922 VAMP3Q15836 100 aa6.26□□□□□ -1.41
UBR4-213ENST00000483922 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.25□□□□□ -1.41
UBR4-213ENST00000483922 ATOH7Q8N100 152 aa6.25□□□□□ -1.41
UBR4-213ENST00000483922 KRTDAPP60985 99 aa6.23□□□□□ -1.41
UBR4-213ENST00000483922 SNHG12Q9BXW3 62 aa6.23□□□□□ -1.41
UBR4-213ENST00000483922 LINC00846Q9NV44 126 aa6.23□□□□□ -1.41
UBR4-213ENST00000483922 MUC12Q9UKN1 5478 aa6.23□□□□□ -1.41
UBR4-213ENST00000483922 RBM12B-AS1Q9P1G2 102 aa6.22□□□□□ -1.41
UBR4-213ENST00000483922 A0A087WSZ3 146 aa6.21□□□□□ -1.42
UBR4-213ENST00000483922 TEN1Q86WV5 123 aa6.21□□□□□ -1.42
UBR4-213ENST00000483922 PPDPFLQ8WWR9 84 aa6.21□□□□□ -1.42
UBR4-213ENST00000483922 SS18L2Q9UHA2 77 aa6.21□□□□□ -1.42
UBR4-213ENST00000483922 LINC00313P59037 77 aa6.19□□□□□ -1.42
UBR4-213ENST00000483922 SCGB1D1O95968 90 aa6.17□□□□□ -1.42
UBR4-213ENST00000483922 A0A1W2PNM2 257 aa6.16□□□□□ -1.42
UBR4-213ENST00000483922 NDUFV3P56181 108 aaKnown RBP6.15□□□□□ -1.42
UBR4-213ENST00000483922 COA6Q5JTJ3 125 aaKnown RBP6.15□□□□□ -1.42
UBR4-213ENST00000483922 C12orf57Q99622 126 aa6.15□□□□□ -1.42
UBR4-213ENST00000483922 Q8N9P0 234 aaPredicted RBP6.14□□□□□ -1.43
UBR4-213ENST00000483922 FAM218AQ96MZ4 157 aa6.14□□□□□ -1.43
UBR4-213ENST00000483922 SIGMAR1Q99720 223 aa6.13□□□□□ -1.43
UBR4-213ENST00000483922 IGKV4-1P06312 121 aa6.12□□□□□ -1.43
UBR4-213ENST00000483922 DEFB116Q30KQ4 102 aa6.12□□□□□ -1.43
UBR4-213ENST00000483922 BVES-AS1Q5T3Y7 98 aa6.12□□□□□ -1.43
UBR4-213ENST00000483922 H3BMG7 143 aa6.1□□□□□ -1.43
UBR4-213ENST00000483922 LINC00472Q9H8W2 130 aa6.09□□□□□ -1.43
UBR4-213ENST00000483922 A8MWP4 228 aa6.08□□□□□ -1.44
UBR4-213ENST00000483922 SPINK7P58062 85 aa6.08□□□□□ -1.44
UBR4-213ENST00000483922 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
UBR4-213ENST00000483922 SNRPEP62304 92 aaKnown RBP6.06□□□□□ -1.44
UBR4-213ENST00000483922 MTURNQ8N3F0 131 aa6.05□□□□□ -1.44
UBR4-213ENST00000483922 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
UBR4-213ENST00000483922 ZCCHC13Q8WW36 166 aaKnown RBP6.03□□□□□ -1.44
UBR4-213ENST00000483922 H0YGX0 51 aa6.02□□□□□ -1.45
UBR4-213ENST00000483922 FABP2P12104 132 aa6.02□□□□□ -1.45
UBR4-213ENST00000483922 TRBV7-4A0A0J9YYF1 115 aa6.01□□□□□ -1.45
UBR4-213ENST00000483922 HIST1H4GQ99525 98 aa6.01□□□□□ -1.45
UBR4-213ENST00000483922 MDN1Q9NU22 5596 aa6□□□□□ -1.45
UBR4-213ENST00000483922 A0A1B0GV72 72 aa5.99□□□□□ -1.45
UBR4-213ENST00000483922 ANKRD29Q8N6D5 301 aa5.99□□□□□ -1.45
UBR4-213ENST00000483922 WFDC13Q8IUB5 93 aa5.98□□□□□ -1.45
UBR4-213ENST00000483922 A0A1B0GVX0 72 aa5.97□□□□□ -1.45
UBR4-213ENST00000483922 KMT2DO14686 5537 aa5.97□□□□□ -1.45
UBR4-213ENST00000483922 RAB37Q96AX2 223 aa5.96□□□□□ -1.46
UBR4-213ENST00000483922 HIST1H2BLQ99880 126 aa5.96□□□□□ -1.46
UBR4-213ENST00000483922 C8orf87E5RJ46 101 aa5.95□□□□□ -1.46
UBR4-213ENST00000483922 HIST3H2BBQ8N257 126 aa5.95□□□□□ -1.46
UBR4-213ENST00000483922 A0A0B4J2C4 111 aa5.94□□□□□ -1.46
UBR4-213ENST00000483922 A0A1B0GX51 115 aa5.94□□□□□ -1.46
UBR4-213ENST00000483922 SNCGO76070 127 aa5.94□□□□□ -1.46
UBR4-213ENST00000483922 HSBP1L1C9JCN9 74 aa5.93□□□□□ -1.46
UBR4-213ENST00000483922 CCKP06307 115 aa5.93□□□□□ -1.46
UBR4-213ENST00000483922 MT1BP07438 61 aa5.93□□□□□ -1.46
UBR4-213ENST00000483922 COX8AP10176 69 aa5.93□□□□□ -1.46
UBR4-213ENST00000483922 TRACP01848 142 aa5.9□□□□□ -1.46
UBR4-213ENST00000483922 KRTAP5-9P26371 169 aa5.9□□□□□ -1.46
UBR4-213ENST00000483922 A6NN06 94 aa5.89□□□□□ -1.47
UBR4-213ENST00000483922 DLEU1O43261 78 aa5.89□□□□□ -1.47
UBR4-213ENST00000483922 TRIAP1O43715 76 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 1148.2 ms