RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 VPS13BQ7Z7G8 4022 aa9.8□□□□□ -0.84
RFTN1-209ENST00000483671 PDE6GP18545 87 aa9.8□□□□□ -0.84
RFTN1-209ENST00000483671 RPL37AP61513 92 aaKnown RBP9.8□□□□□ -0.84
RFTN1-209ENST00000483671 GAGE2AQ6NT46 116 aa9.8□□□□□ -0.84
RFTN1-209ENST00000483671 C14orf132Q9NPU4 83 aa9.8□□□□□ -0.84
RFTN1-209ENST00000483671 TRBV7-4A0A0J9YYF1 115 aa9.79□□□□□ -0.84
RFTN1-209ENST00000483671 C21orf62-AS1Q17RA5 79 aa9.79□□□□□ -0.84
RFTN1-209ENST00000483671 IGLV8-61A0A075B6I0 122 aa9.78□□□□□ -0.84
RFTN1-209ENST00000483671 C3orf22Q8N5N4 141 aa9.78□□□□□ -0.84
RFTN1-209ENST00000483671 DSCR8Q96T75 97 aa9.78□□□□□ -0.84
RFTN1-209ENST00000483671 SRRM2Q9UQ35 2752 aaKnown RBP9.78□□□□□ -0.84
RFTN1-209ENST00000483671 FAM240AA0A1B0GVK7 77 aa9.76□□□□□ -0.85
RFTN1-209ENST00000483671 Q6ZQT0 140 aa9.76□□□□□ -0.85
RFTN1-209ENST00000483671 A0A1B0GV72 72 aa9.75□□□□□ -0.85
RFTN1-209ENST00000483671 F8WEM9 126 aa9.75□□□□□ -0.85
RFTN1-209ENST00000483671 KRTAP10-4P60372 401 aaPredicted RBP9.75□□□□□ -0.85
RFTN1-209ENST00000483671 SMR3BP02814 79 aaPredicted RBP9.74□□□□□ -0.85
RFTN1-209ENST00000483671 CCKP06307 115 aa9.74□□□□□ -0.85
RFTN1-209ENST00000483671 SPINK6Q6UWN8 80 aa9.73□□□□□ -0.85
RFTN1-209ENST00000483671 ACYP1P07311 99 aa9.72□□□□□ -0.85
RFTN1-209ENST00000483671 Q6JHZ5 121 aa9.7□□□□□ -0.86
RFTN1-209ENST00000483671 RYR1P21817 5038 aa9.7□□□□□ -0.86
RFTN1-209ENST00000483671 FAM229BQ4G0N7 80 aa9.69□□□□□ -0.86
RFTN1-209ENST00000483671 FAT1Q14517 4588 aa9.69□□□□□ -0.86
RFTN1-209ENST00000483671 HSPG2P98160 4391 aa9.68□□□□□ -0.86
RFTN1-209ENST00000483671 A0A1B0GW54 56 aa9.66□□□□□ -0.86
RFTN1-209ENST00000483671 PLA2G1BP04054 148 aaKnown RBP9.66□□□□□ -0.86
RFTN1-209ENST00000483671 KRTAP1-4P0C5Y4 121 aa9.66□□□□□ -0.86
RFTN1-209ENST00000483671 IGFL1Q6UW32 110 aa9.66□□□□□ -0.86
RFTN1-209ENST00000483671 EPPK1P58107 5090 aaKnown RBP9.66□□□□□ -0.86
RFTN1-209ENST00000483671 FAM229AH3BQW9 127 aa9.65□□□□□ -0.86
RFTN1-209ENST00000483671 Q8NBF4 154 aa9.65□□□□□ -0.86
RFTN1-209ENST00000483671 A0A1W2PNM2 257 aa9.64□□□□□ -0.87
RFTN1-209ENST00000483671 ANAPC11Q9NYG5 84 aa9.64□□□□□ -0.87
RFTN1-209ENST00000483671 IGLV9-49A0A0B4J1Y8 123 aa9.62□□□□□ -0.87
RFTN1-209ENST00000483671 Q6Q795 121 aa9.62□□□□□ -0.87
RFTN1-209ENST00000483671 CDIP1Q9H305 208 aa9.62□□□□□ -0.87
RFTN1-209ENST00000483671 CRYGAP11844 174 aa9.61□□□□□ -0.87
RFTN1-209ENST00000483671 C9orf153Q5TBE3 101 aa9.61□□□□□ -0.87
RFTN1-209ENST00000483671 MOBPQ13875 183 aa9.6□□□□□ -0.87
RFTN1-209ENST00000483671 SSBP3-AS1Q7Z2R9 100 aa9.59□□□□□ -0.87
RFTN1-209ENST00000483671 VPS25Q9BRG1 176 aa9.59□□□□□ -0.87
RFTN1-209ENST00000483671 LINC00846Q9NV44 126 aa9.59□□□□□ -0.87
RFTN1-209ENST00000483671 A0A087X002 238 aa9.58□□□□□ -0.88
RFTN1-209ENST00000483671 Q5VSD8 79 aa9.58□□□□□ -0.88
RFTN1-209ENST00000483671 KIAA1109Q2LD37 5005 aa9.58□□□□□ -0.88
RFTN1-209ENST00000483671 PKHD1L1Q86WI1 4243 aa9.57□□□□□ -0.88
RFTN1-209ENST00000483671 A0A0G2JQZ4 141 aa9.56□□□□□ -0.88
RFTN1-209ENST00000483671 KRTAP13-2Q52LG2 175 aa9.56□□□□□ -0.88
RFTN1-209ENST00000483671 Q8N1X5 172 aa9.56□□□□□ -0.88
RFTN1-209ENST00000483671 TRBV7-7A0A0K0K1E9 115 aa9.54□□□□□ -0.88
RFTN1-209ENST00000483671 CD164Q04900 197 aa9.54□□□□□ -0.88
RFTN1-209ENST00000483671 UBL5Q9BZL1 73 aa9.54□□□□□ -0.88
RFTN1-209ENST00000483671 LINC00643Q86TS7 51 aa9.53□□□□□ -0.88
RFTN1-209ENST00000483671 KRTAP17-1Q9BYP8 105 aa9.52□□□□□ -0.89
RFTN1-209ENST00000483671 Q6ZVQ6 151 aa9.51□□□□□ -0.89
RFTN1-209ENST00000483671 A0A087WSZ3 146 aa9.48□□□□□ -0.89
RFTN1-209ENST00000483671 NREPQ16612 68 aa9.47□□□□□ -0.89
RFTN1-209ENST00000483671 ATP5EP2Q5VTU8 51 aa9.47□□□□□ -0.89
RFTN1-209ENST00000483671 TYMSOSQ8TAI1 123 aa9.47□□□□□ -0.89
RFTN1-209ENST00000483671 PRR26Q8N8Z3 221 aa9.46□□□□□ -0.9
RFTN1-209ENST00000483671 BIRC6Q9NR09 4857 aa9.45□□□□□ -0.9
RFTN1-209ENST00000483671 SS18L2Q9UHA2 77 aa9.44□□□□□ -0.9
RFTN1-209ENST00000483671 MT-ATP8P03928 68 aa9.43□□□□□ -0.9
RFTN1-209ENST00000483671 SIGMAR1Q99720 223 aa9.43□□□□□ -0.9
RFTN1-209ENST00000483671 CXCL6P80162 114 aa9.42□□□□□ -0.9
RFTN1-209ENST00000483671 Q5XG85 94 aa9.42□□□□□ -0.9
RFTN1-209ENST00000483671 HRCT1Q6UXD1 115 aa9.41□□□□□ -0.9
RFTN1-209ENST00000483671 ASB16-AS1Q495Z4 193 aa9.39□□□□□ -0.91
RFTN1-209ENST00000483671 SPAG11AQ6PDA7 123 aa9.39□□□□□ -0.91
RFTN1-209ENST00000483671 LINC00472Q9H8W2 130 aa9.39□□□□□ -0.91
RFTN1-209ENST00000483671 SPINK1P00995 79 aa9.38□□□□□ -0.91
RFTN1-209ENST00000483671 RPS29P62273 56 aaKnown RBP9.38□□□□□ -0.91
RFTN1-209ENST00000483671 IMUPQ9GZP8 106 aa9.38□□□□□ -0.91
RFTN1-209ENST00000483671 BPY2O14599 106 aa9.37□□□□□ -0.91
RFTN1-209ENST00000483671 LINC00304Q8N9R0 145 aa9.37□□□□□ -0.91
RFTN1-209ENST00000483671 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
RFTN1-209ENST00000483671 C4orf48Q5BLP8 95 aa9.36□□□□□ -0.91
RFTN1-209ENST00000483671 KRTAP10-8P60410 259 aa9.35□□□□□ -0.91
RFTN1-209ENST00000483671 Q96NJ1 140 aa9.35□□□□□ -0.91
RFTN1-209ENST00000483671 LIMD2Q9BT23 127 aa9.34□□□□□ -0.91
RFTN1-209ENST00000483671 J3KT08 172 aa9.33□□□□□ -0.92
RFTN1-209ENST00000483671 HERC2O95714 4834 aa9.31□□□□□ -0.92
RFTN1-209ENST00000483671 FAT3Q8TDW7 4589 aa9.31□□□□□ -0.92
RFTN1-209ENST00000483671 DSCR10P59022 87 aa9.31□□□□□ -0.92
RFTN1-209ENST00000483671 LRP1Q07954 4544 aaKnown RBP9.29□□□□□ -0.92
RFTN1-209ENST00000483671 TNXBP22105 4242 aa9.28□□□□□ -0.92
RFTN1-209ENST00000483671 OXTP01178 125 aa9.28□□□□□ -0.92
RFTN1-209ENST00000483671 KRTAP4-5Q9BYR2 181 aa9.28□□□□□ -0.92
RFTN1-209ENST00000483671 FLG2Q5D862 2391 aaPredicted RBP9.27□□□□□ -0.93
RFTN1-209ENST00000483671 A8MWP4 228 aa9.27□□□□□ -0.93
RFTN1-209ENST00000483671 IGKV4-1P06312 121 aa9.27□□□□□ -0.93
RFTN1-209ENST00000483671 DEFB116Q30KQ4 102 aa9.27□□□□□ -0.93
RFTN1-209ENST00000483671 C1orf195Q5TG92 126 aa9.26□□□□□ -0.93
RFTN1-209ENST00000483671 MT1HL1P0DM35 61 aa9.25□□□□□ -0.93
RFTN1-209ENST00000483671 HIST1H4AP62805 103 aaKnown RBP9.25□□□□□ -0.93
RFTN1-209ENST00000483671 SCGB1A1P11684 91 aa9.24□□□□□ -0.93
RFTN1-209ENST00000483671 K7EQZ3 153 aa9.23□□□□□ -0.93
RFTN1-209ENST00000483671 PRR15Q8IV56 129 aa9.23□□□□□ -0.93
RFTN1-209ENST00000483671 Q8N9L7 120 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms