RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 UBE2V1Q13404 147 aa5.01□□□□□ -1.61
USP4-210ENST00000483212 GTF2H5Q6ZYL4 71 aa5.01□□□□□ -1.61
USP4-210ENST00000483212 PKHD1L1Q86WI1 4243 aa5.01□□□□□ -1.61
USP4-210ENST00000483212 IGLV5-48A0A075B6I7 105 aa5□□□□□ -1.61
USP4-210ENST00000483212 SLC25A20O43772 301 aa5□□□□□ -1.61
USP4-210ENST00000483212 RPL37AP61513 92 aaKnown RBP5□□□□□ -1.61
USP4-210ENST00000483212 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5□□□□□ -1.61
USP4-210ENST00000483212 Q6ZQY7 126 aa5□□□□□ -1.61
USP4-210ENST00000483212 ST20-AS1Q8NBB2 130 aa5□□□□□ -1.61
USP4-210ENST00000483212 LINC01600Q96MT4 127 aa5□□□□□ -1.61
USP4-210ENST00000483212 HIGD2AQ9BW72 106 aa5□□□□□ -1.61
USP4-210ENST00000483212 C9JAW5 83 aa4.99□□□□□ -1.61
USP4-210ENST00000483212 MTURNQ8N3F0 131 aa4.99□□□□□ -1.61
USP4-210ENST00000483212 SRRM2Q9UQ35 2752 aaKnown RBP4.99□□□□□ -1.61
USP4-210ENST00000483212 DNAL4O96015 105 aa4.98□□□□□ -1.61
USP4-210ENST00000483212 H3BT86 120 aa4.97□□□□□ -1.61
USP4-210ENST00000483212 SPRR1BP22528 89 aa4.97□□□□□ -1.61
USP4-210ENST00000483212 OCIAD2Q56VL3 154 aa4.97□□□□□ -1.61
USP4-210ENST00000483212 Q8N377 158 aa4.97□□□□□ -1.61
USP4-210ENST00000483212 ORMDL1Q9P0S3 153 aa4.97□□□□□ -1.61
USP4-210ENST00000483212 ABCA13Q86UQ4 5058 aa4.97□□□□□ -1.61
USP4-210ENST00000483212 SNCGO76070 127 aa4.96□□□□□ -1.62
USP4-210ENST00000483212 BAALC-AS2P0C853 105 aa4.96□□□□□ -1.62
USP4-210ENST00000483212 SMIM29Q86T20 159 aa4.96□□□□□ -1.62
USP4-210ENST00000483212 SPRR4Q96PI1 79 aa4.96□□□□□ -1.62
USP4-210ENST00000483212 F8W1H4 67 aa4.95□□□□□ -1.62
USP4-210ENST00000483212 LINC00483Q53H64 154 aa4.95□□□□□ -1.62
USP4-210ENST00000483212 ANKRD29Q8N6D5 301 aa4.95□□□□□ -1.62
USP4-210ENST00000483212 PPDPFLQ8WWR9 84 aa4.95□□□□□ -1.62
USP4-210ENST00000483212 TEX49A0A1B0GTD5 131 aa4.94□□□□□ -1.62
USP4-210ENST00000483212 H3BQ85 93 aa4.94□□□□□ -1.62
USP4-210ENST00000483212 TMEM256-PLSCR3K7ERE1 68 aa4.94□□□□□ -1.62
USP4-210ENST00000483212 Q5VSD8 79 aa4.94□□□□□ -1.62
USP4-210ENST00000483212 SPINK6Q6UWN8 80 aa4.94□□□□□ -1.62
USP4-210ENST00000483212 DEFB105AQ8NG35 78 aa4.94□□□□□ -1.62
USP4-210ENST00000483212 KRTAP1-4P0C5Y4 121 aa4.93□□□□□ -1.62
USP4-210ENST00000483212 Q8N1X5 172 aa4.93□□□□□ -1.62
USP4-210ENST00000483212 OBSCN-AS1Q96MR7 158 aa4.93□□□□□ -1.62
USP4-210ENST00000483212 ZNF706Q9Y5V0 76 aaPredicted RBP4.93□□□□□ -1.62
USP4-210ENST00000483212 GHRHP01286 108 aa4.92□□□□□ -1.62
USP4-210ENST00000483212 PLA2G1BP04054 148 aaKnown RBP4.92□□□□□ -1.62
USP4-210ENST00000483212 GAGE2AQ6NT46 116 aa4.92□□□□□ -1.62
USP4-210ENST00000483212 C3orf22Q8N5N4 141 aa4.92□□□□□ -1.62
USP4-210ENST00000483212 FAT3Q8TDW7 4589 aa4.92□□□□□ -1.62
USP4-210ENST00000483212 NDUFV3P56181 108 aaKnown RBP4.91□□□□□ -1.62
USP4-210ENST00000483212 ANAPC11Q9NYG5 84 aa4.91□□□□□ -1.62
USP4-210ENST00000483212 IGLV8-61A0A075B6I0 122 aa4.9□□□□□ -1.63
USP4-210ENST00000483212 KRTAP9-7A8MTY7 169 aa4.9□□□□□ -1.63
USP4-210ENST00000483212 ETDBQ3ZM63 59 aa4.9□□□□□ -1.63
USP4-210ENST00000483212 TEN1Q86WV5 123 aa4.9□□□□□ -1.63
USP4-210ENST00000483212 LRP1Q07954 4544 aaKnown RBP4.89□□□□□ -1.63
USP4-210ENST00000483212 FAM229BQ4G0N7 80 aa4.89□□□□□ -1.63
USP4-210ENST00000483212 A0A087X002 238 aa4.88□□□□□ -1.63
USP4-210ENST00000483212 KRTAP13-2Q52LG2 175 aa4.88□□□□□ -1.63
USP4-210ENST00000483212 LAMTOR3Q9UHA4 124 aa4.88□□□□□ -1.63
USP4-210ENST00000483212 TRBV7-4A0A0J9YYF1 115 aa4.87□□□□□ -1.63
USP4-210ENST00000483212 A0A1B0GV72 72 aa4.87□□□□□ -1.63
USP4-210ENST00000483212 JMJD7-PLA2G4BH0Y9G9 81 aa4.87□□□□□ -1.63
USP4-210ENST00000483212 MYCBP2O75592 4640 aa4.87□□□□□ -1.63
USP4-210ENST00000483212 LOC110117498A0A087WWA1 95 aa4.86□□□□□ -1.63
USP4-210ENST00000483212 RBM3P98179 157 aaKnown RBP4.86□□□□□ -1.63
USP4-210ENST00000483212 C14orf132Q9NPU4 83 aa4.86□□□□□ -1.63
USP4-210ENST00000483212 IGLV9-49A0A0B4J1Y8 123 aa4.85□□□□□ -1.63
USP4-210ENST00000483212 F8WEM9 126 aa4.85□□□□□ -1.63
USP4-210ENST00000483212 IGFL1Q6UW32 110 aa4.85□□□□□ -1.63
USP4-210ENST00000483212 Q8NBF4 154 aa4.85□□□□□ -1.63
USP4-210ENST00000483212 TNXBP22105 4242 aa4.84□□□□□ -1.63
USP4-210ENST00000483212 A0A0G2JQZ4 141 aa4.84□□□□□ -1.63
USP4-210ENST00000483212 CRYGAP11844 174 aa4.84□□□□□ -1.63
USP4-210ENST00000483212 MOBPQ13875 183 aa4.84□□□□□ -1.63
USP4-210ENST00000483212 Q6ZQT0 140 aa4.84□□□□□ -1.63
USP4-210ENST00000483212 A0A1W2PNM2 257 aa4.83□□□□□ -1.64
USP4-210ENST00000483212 C9orf153Q5TBE3 101 aa4.83□□□□□ -1.64
USP4-210ENST00000483212 Q6JHZ5 121 aa4.83□□□□□ -1.64
USP4-210ENST00000483212 PRR26Q8N8Z3 221 aa4.83□□□□□ -1.64
USP4-210ENST00000483212 PCLOQ9Y6V0 5065 aa4.83□□□□□ -1.64
USP4-210ENST00000483212 SSBP3-AS1Q7Z2R9 100 aa4.82□□□□□ -1.64
USP4-210ENST00000483212 DSCR8Q96T75 97 aa4.82□□□□□ -1.64
USP4-210ENST00000483212 CCKP06307 115 aa4.81□□□□□ -1.64
USP4-210ENST00000483212 PDE6GP18545 87 aa4.81□□□□□ -1.64
USP4-210ENST00000483212 Q6Q795 121 aa4.81□□□□□ -1.64
USP4-210ENST00000483212 KRTAP10-8P60410 259 aa4.8□□□□□ -1.64
USP4-210ENST00000483212 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
USP4-210ENST00000483212 TYMSOSQ8TAI1 123 aa4.79□□□□□ -1.64
USP4-210ENST00000483212 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
USP4-210ENST00000483212 C21orf62-AS1Q17RA5 79 aa4.78□□□□□ -1.64
USP4-210ENST00000483212 FLG2Q5D862 2391 aaPredicted RBP4.77□□□□□ -1.65
USP4-210ENST00000483212 TRBV7-7A0A0K0K1E9 115 aa4.77□□□□□ -1.65
USP4-210ENST00000483212 FAM240AA0A1B0GVK7 77 aa4.77□□□□□ -1.65
USP4-210ENST00000483212 CD164Q04900 197 aa4.77□□□□□ -1.65
USP4-210ENST00000483212 A0A1B0GW54 56 aa4.76□□□□□ -1.65
USP4-210ENST00000483212 VPS25Q9BRG1 176 aa4.76□□□□□ -1.65
USP4-210ENST00000483212 OXTP01178 125 aa4.75□□□□□ -1.65
USP4-210ENST00000483212 HRCT1Q6UXD1 115 aa4.75□□□□□ -1.65
USP4-210ENST00000483212 LINC00846Q9NV44 126 aa4.75□□□□□ -1.65
USP4-210ENST00000483212 A0A087WSZ3 146 aa4.74□□□□□ -1.65
USP4-210ENST00000483212 KRTAP29-1A8MX34 341 aaPredicted RBP4.74□□□□□ -1.65
USP4-210ENST00000483212 J3QR89 54 aa4.74□□□□□ -1.65
USP4-210ENST00000483212 ACYP1P07311 99 aa4.74□□□□□ -1.65
USP4-210ENST00000483212 LINC00304Q8N9R0 145 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms