RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 RPL7P18124 248 aaKnown RBP-0.25□□□□□ -2.45
COPA-204ENST00000481522 TMEM141Q96I45 108 aa-0.25□□□□□ -2.45
COPA-204ENST00000481522 V9GYS6 101 aa-0.25□□□□□ -2.45
COPA-204ENST00000481522 MIF4GDA9UHW6 222 aaKnown RBP-0.26□□□□□ -2.45
COPA-204ENST00000481522 M0R2P5 195 aa-0.26□□□□□ -2.45
COPA-204ENST00000481522 VPS25Q9BRG1 176 aa-0.26□□□□□ -2.45
COPA-204ENST00000481522 NAA60Q9H7X0 242 aa-0.26□□□□□ -2.45
COPA-204ENST00000481522 BET1LQ9NYM9 111 aa-0.26□□□□□ -2.45
COPA-204ENST00000481522 C6orf48Q9UBA6 75 aa-0.26□□□□□ -2.45
COPA-204ENST00000481522 SLC25A5P05141 298 aaKnown RBP-0.27□□□□□ -2.45
COPA-204ENST00000481522 PYYP10082 97 aa-0.27□□□□□ -2.45
COPA-204ENST00000481522 RBP2P50120 134 aa-0.27□□□□□ -2.45
COPA-204ENST00000481522 PPDPFLQ8WWR9 84 aa-0.27□□□□□ -2.45
COPA-204ENST00000481522 IER3IP1Q9Y5U9 82 aa-0.27□□□□□ -2.45
COPA-204ENST00000481522 HMGN3Q15651 99 aa-0.28□□□□□ -2.45
COPA-204ENST00000481522 A0A1B0GV72 72 aa-0.29□□□□□ -2.46
COPA-204ENST00000481522 TRAPPC2P0DI81 140 aa-0.29□□□□□ -2.46
COPA-204ENST00000481522 TRAPPC2BP0DI82 140 aa-0.29□□□□□ -2.46
COPA-204ENST00000481522 RPL38P63173 70 aaKnown RBP-0.29□□□□□ -2.46
COPA-204ENST00000481522 EMX2Q04743 252 aa-0.29□□□□□ -2.46
COPA-204ENST00000481522 TMEM128Q5BJH2 165 aa-0.29□□□□□ -2.46
COPA-204ENST00000481522 CRYM-AS1A6NIL9 109 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 ZNF670-ZNF695F2Z2N8 137 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 IGLC1P0CG04 106 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 ELOF1P60002 83 aaKnown RBP-0.3□□□□□ -2.46
COPA-204ENST00000481522 PKIAP61925 76 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 HSD17B12Q53GQ0 312 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 OR8I2Q8N0Y5 310 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 AQP10Q96PS8 301 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 NDUFA4L2Q9NRX3 87 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 TMEM242Q9NWH2 141 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 TAS2R8Q9NYW2 309 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 CALML5Q9NZT1 146 aa-0.3□□□□□ -2.46
COPA-204ENST00000481522 AKR1D1P51857 326 aa-0.31□□□□□ -2.46
COPA-204ENST00000481522 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.31□□□□□ -2.46
COPA-204ENST00000481522 LSM10Q969L4 123 aaKnown RBP-0.31□□□□□ -2.46
COPA-204ENST00000481522 F8WEM9 126 aa-0.33□□□□□ -2.46
COPA-204ENST00000481522 SNRPGP62308 76 aaKnown RBP-0.33□□□□□ -2.46
COPA-204ENST00000481522 TRBV7-3A0A075B6L6 115 aa-0.34□□□□□ -2.46
COPA-204ENST00000481522 TCRBV3S1A0A5B6 114 aa-0.34□□□□□ -2.46
COPA-204ENST00000481522 DPM2O94777 84 aa-0.34□□□□□ -2.46
COPA-204ENST00000481522 FABP1P07148 127 aa-0.34□□□□□ -2.46
COPA-204ENST00000481522 S100GP29377 79 aa-0.34□□□□□ -2.46
COPA-204ENST00000481522 SPAG11BQ08648 103 aa-0.34□□□□□ -2.46
COPA-204ENST00000481522 NMBP08949 121 aa-0.35□□□□□ -2.47
COPA-204ENST00000481522 RPS28P62857 69 aaKnown RBP-0.35□□□□□ -2.47
COPA-204ENST00000481522 SMIM11BQ8TCY0 68 aa-0.35□□□□□ -2.47
COPA-204ENST00000481522 ABRACLQ9P1F3 81 aa-0.35□□□□□ -2.47
COPA-204ENST00000481522 TRBV25-1A0A075B6N4 114 aa-0.36□□□□□ -2.47
COPA-204ENST00000481522 IFITM1P13164 125 aa-0.36□□□□□ -2.47
COPA-204ENST00000481522 LINC01590Q5TEZ4 76 aa-0.36□□□□□ -2.47
COPA-204ENST00000481522 TMEM91Q6ZNR0 172 aa-0.36□□□□□ -2.47
COPA-204ENST00000481522 CYP2G1PQ6ZSU1 146 aa-0.36□□□□□ -2.47
COPA-204ENST00000481522 ARHGAP5-AS1Q96IT6 56 aa-0.36□□□□□ -2.47
COPA-204ENST00000481522 J3KT08 172 aa-0.37□□□□□ -2.47
COPA-204ENST00000481522 NDUFA1O15239 70 aa-0.37□□□□□ -2.47
COPA-204ENST00000481522 SMIM24O75264 130 aa-0.37□□□□□ -2.47
COPA-204ENST00000481522 COX4I1P13073 169 aa-0.37□□□□□ -2.47
COPA-204ENST00000481522 DNAJC15Q9Y5T4 150 aa-0.37□□□□□ -2.47
COPA-204ENST00000481522 TRAV30A0A087WSZ9 112 aa-0.38□□□□□ -2.47
COPA-204ENST00000481522 TRBV6-1A0A0K0K1D8 114 aa-0.38□□□□□ -2.47
COPA-204ENST00000481522 LINC00032P0C843 101 aa-0.38□□□□□ -2.47
COPA-204ENST00000481522 SLC25A6P12236 298 aa-0.38□□□□□ -2.47
COPA-204ENST00000481522 SNX29P2Q8IUI4 249 aa-0.38□□□□□ -2.47
COPA-204ENST00000481522 C1orf54Q8WWF1 131 aa-0.38□□□□□ -2.47
COPA-204ENST00000481522 MT-ND4LP03901 98 aa-0.39□□□□□ -2.47
COPA-204ENST00000481522 TMEM244Q5VVB8 128 aa-0.39□□□□□ -2.47
COPA-204ENST00000481522 AGPAT4-IT1Q9H0P7 198 aa-0.39□□□□□ -2.47
COPA-204ENST00000481522 SCN3BQ9NY72 215 aa-0.39□□□□□ -2.47
COPA-204ENST00000481522 ERG28Q9UKR5 140 aa-0.39□□□□□ -2.47
COPA-204ENST00000481522 BORCS7-ASMTA0A0B4J1R7 106 aa-0.4□□□□□ -2.47
COPA-204ENST00000481522 TSTD3H0UI37 97 aa-0.4□□□□□ -2.47
COPA-204ENST00000481522 SSBP1Q04837 148 aaKnown RBP-0.4□□□□□ -2.47
COPA-204ENST00000481522 SMIM15Q7Z3B0 74 aa-0.4□□□□□ -2.47
COPA-204ENST00000481522 C5orf38Q86SI9 138 aa-0.4□□□□□ -2.47
COPA-204ENST00000481522 PP6455Q8WZ26 134 aa-0.4□□□□□ -2.47
COPA-204ENST00000481522 IFI27L1Q96BM0 104 aa-0.4□□□□□ -2.47
COPA-204ENST00000481522 BANF2Q9H503 90 aa-0.4□□□□□ -2.47
COPA-204ENST00000481522 FAM74A4Q5TZK3 123 aa-0.41□□□□□ -2.48
COPA-204ENST00000481522 AKAP14Q86UN6 197 aa-0.41□□□□□ -2.48
COPA-204ENST00000481522 MAGOHBQ96A72 148 aaKnown RBP-0.41□□□□□ -2.48
COPA-204ENST00000481522 HSPB11Q9Y547 144 aa-0.41□□□□□ -2.48
COPA-204ENST00000481522 S4R3F8 94 aa-0.41□□□□□ -2.48
COPA-204ENST00000481522 TPT1P8Q9HAU6 139 aa-0.42□□□□□ -2.48
COPA-204ENST00000481522 A0A1B0GX51 115 aa-0.43□□□□□ -2.48
COPA-204ENST00000481522 CCDC179H3BU77 68 aa-0.43□□□□□ -2.48
COPA-204ENST00000481522 S100A5P33763 92 aa-0.43□□□□□ -2.48
COPA-204ENST00000481522 TCTE3Q8IZS6 198 aa-0.43□□□□□ -2.48
COPA-204ENST00000481522 COX7B2Q8TF08 81 aa-0.43□□□□□ -2.48
COPA-204ENST00000481522 LZICQ8WZA0 190 aa-0.43□□□□□ -2.48
COPA-204ENST00000481522 J3QLW9 94 aa-0.44□□□□□ -2.48
COPA-204ENST00000481522 M0R3E3 92 aa-0.44□□□□□ -2.48
COPA-204ENST00000481522 S100A10P60903 97 aa-0.44□□□□□ -2.48
COPA-204ENST00000481522 CLLU1Q5K131 121 aa-0.44□□□□□ -2.48
COPA-204ENST00000481522 Q6AWC8 147 aa-0.44□□□□□ -2.48
COPA-204ENST00000481522 C20orf197Q8N268 126 aa-0.44□□□□□ -2.48
COPA-204ENST00000481522 R4GMQ9 66 aa-0.44□□□□□ -2.48
COPA-204ENST00000481522 V9GYV3 84 aa-0.44□□□□□ -2.48
COPA-204ENST00000481522 M0QZ58 72 aa-0.45□□□□□ -2.48
COPA-204ENST00000481522 CFDP00746 253 aaPredicted RBP-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms