RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 KTN1Q86UP2 1357 aaKnown RBP0.06□□□□□ -2.4
CALD1-219ENST00000480638 SPEF2Q9C093 1822 aa0.06□□□□□ -2.4
CALD1-219ENST00000480638 PIGBOS1A0A0B4J2F0 54 aa0.06□□□□□ -2.4
CALD1-219ENST00000480638 F8VRH5 84 aa0.06□□□□□ -2.4
CALD1-219ENST00000480638 BCE1O60756 84 aa0.06□□□□□ -2.4
CALD1-219ENST00000480638 SMIM6P0DI80 62 aa0.06□□□□□ -2.4
CALD1-219ENST00000480638 GNG4P50150 75 aa0.06□□□□□ -2.4
CALD1-219ENST00000480638 PPP3R1P63098 170 aa0.06□□□□□ -2.4
CALD1-219ENST00000480638 HAMPP81172 84 aa0.06□□□□□ -2.4
CALD1-219ENST00000480638 Q5BKY6 102 aa0.06□□□□□ -2.4
CALD1-219ENST00000480638 PARP14Q460N5 1801 aa0.06□□□□□ -2.4
CALD1-219ENST00000480638 DOCK1Q14185 1865 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 TRAV22A0A0B4J277 110 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 UBE2L5PA0A1B0GUS4 154 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 CHKB-CPT1BH3BT56 60 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 SPINK8P0C7L1 97 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 UBE2L3P68036 154 aaKnown RBP0.05□□□□□ -2.4
CALD1-219ENST00000480638 BAGE2Q86Y30 109 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 MYOZ3Q8TDC0 251 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 TMEM203Q969S6 136 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 CNFNQ9BYD5 112 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 CDC42SE2Q9NRR3 84 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 LINC01558Q9Y6Z2 57 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 WNK3Q9BYP7 1800 aa0.05□□□□□ -2.4
CALD1-219ENST00000480638 FAM24AA6NFZ4 105 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 I3L2K1 104 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 UQCR11O14957 56 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 SPINK1P00995 79 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 IFITM1P13164 125 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 GNG11P61952 73 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 TMEM170BQ5T4T1 132 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 Q6JHZ5 121 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 SFTA2Q6UW10 78 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 SMIM4Q8WVI0 70 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 PRO0255Q9UI72 69 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 ANKRD36BQ8N2N9 1353 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 PLIN4Q96Q06 1357 aa0.04□□□□□ -2.4
CALD1-219ENST00000480638 CD163L1Q9NR16 1453 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 IQGAP3Q86VI3 1631 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 A0A0D9SFI3 127 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 M0R3E3 92 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 SFT2D2O95562 160 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 IGLC1P0CG04 106 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 SNCAP37840 140 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 ATP5EP56381 51 aaPredicted RBP0.03□□□□□ -2.4
CALD1-219ENST00000480638 UBE2D3P61077 147 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 UBE2D2P62837 147 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 HSD52Q0P140 79 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 Q0VG73 95 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 COX17Q14061 63 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 FAM223AQ8IWN6 122 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 SVBPQ8N300 66 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 C14orf144Q96I85 54 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 FAM167A-AS1Q96KT0 104 aa0.03□□□□□ -2.4
CALD1-219ENST00000480638 hADV29S1A0JD25 119 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 C20orf202A1L168 122 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 ATP6V1G2-DDX39BF2Z307 99 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 S100PP25815 95 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 DCDP81605 110 aaKnown RBP0.02□□□□□ -2.41
CALD1-219ENST00000480638 MRPS10P82664 201 aaKnown RBP0.02□□□□□ -2.41
CALD1-219ENST00000480638 COX6B2Q6YFQ2 88 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 SPRR4Q96PI1 79 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 NXT2Q9NPJ8 142 aaKnown RBP0.02□□□□□ -2.41
CALD1-219ENST00000480638 MANBALQ9NQG1 85 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 ARL2-SNX15V9GYD0 113 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 MYH7P12883 1935 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 CCNB3Q8WWL7 1395 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 PI4KAP42356 2102 aa0.02□□□□□ -2.41
CALD1-219ENST00000480638 EDC4Q6P2E9 1401 aaKnown RBP0.02□□□□□ -2.41
CALD1-219ENST00000480638 ARFGEF2Q9Y6D5 1785 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 LOC285095A0A1B0GVY8 99 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 APOC3P02656 99 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 DEFB109BQ30KR1 87 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 GTF2H5Q6ZYL4 71 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 Q8IZM0 81 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 LCN9Q8WX39 176 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 TP53AIP1Q9HCN2 124 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 UQCR10Q9UDW1 63 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 U3KQA8 63 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 VPS8Q8N3P4 1428 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 ANKRD36CQ5JPF3 1778 aa0.01□□□□□ -2.41
CALD1-219ENST00000480638 NAP1L6A6NFF2 107 aa0□□□□□ -2.41
CALD1-219ENST00000480638 FAM223BA6NKX1 122 aa0□□□□□ -2.41
CALD1-219ENST00000480638 TMEM262E9PQX1 116 aa0□□□□□ -2.41
CALD1-219ENST00000480638 H3BQ15 152 aa0□□□□□ -2.41
CALD1-219ENST00000480638 MT2AP02795 61 aa0□□□□□ -2.41
CALD1-219ENST00000480638 MT1FP04733 61 aa0□□□□□ -2.41
CALD1-219ENST00000480638 MGPP08493 103 aa0□□□□□ -2.41
CALD1-219ENST00000480638 UBA52P62987 128 aaKnown RBP0□□□□□ -2.41
CALD1-219ENST00000480638 WFDC2Q14508 124 aa0□□□□□ -2.41
CALD1-219ENST00000480638 C10orf113Q5VZT2 155 aa0□□□□□ -2.41
CALD1-219ENST00000480638 TMEM263Q8WUH6 116 aaKnown RBP0□□□□□ -2.41
CALD1-219ENST00000480638 C12orf57Q99622 126 aa0□□□□□ -2.41
CALD1-219ENST00000480638 CGREF1Q99674 301 aa0□□□□□ -2.41
CALD1-219ENST00000480638 PRO1854Q9UHT4 67 aa0□□□□□ -2.41
CALD1-219ENST00000480638 SPCS1Q9Y6A9 102 aa0□□□□□ -2.41
CALD1-219ENST00000480638 MYO7BQ6PIF6 2116 aa-0.01□□□□□ -2.41
CALD1-219ENST00000480638 MYH9P35579 1960 aaKnown RBP-0.01□□□□□ -2.41
CALD1-219ENST00000480638 CEP162Q5TB80 1403 aa-0.01□□□□□ -2.41
CALD1-219ENST00000480638 TRBV6-1A0A0K0K1D8 114 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms