RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 TRBV7-6A0A0J9YX20 115 aa5.17□□□□□ -1.58
USP54-212ENST00000480210 A0A0U1RRA0 63 aa5.17□□□□□ -1.58
USP54-212ENST00000480210 H7BZZ5 65 aa5.17□□□□□ -1.58
USP54-212ENST00000480210 SMR3BP02814 79 aaPredicted RBP5.17□□□□□ -1.58
USP54-212ENST00000480210 MRPL55Q7Z7F7 128 aaKnown RBP5.17□□□□□ -1.58
USP54-212ENST00000480210 C20orf197Q8N268 126 aa5.17□□□□□ -1.58
USP54-212ENST00000480210 LINC00167Q96N53 147 aa5.17□□□□□ -1.58
USP54-212ENST00000480210 HSPG2P98160 4391 aa5.16□□□□□ -1.58
USP54-212ENST00000480210 IGKV3D-7A0A0C4DH55 119 aa5.16□□□□□ -1.58
USP54-212ENST00000480210 FAM168BA1KXE4 195 aa5.16□□□□□ -1.58
USP54-212ENST00000480210 M0R378 163 aa5.16□□□□□ -1.58
USP54-212ENST00000480210 VPREB1P12018 145 aa5.16□□□□□ -1.58
USP54-212ENST00000480210 RPL37AP61513 92 aaKnown RBP5.16□□□□□ -1.58
USP54-212ENST00000480210 UBE2BP63146 152 aa5.16□□□□□ -1.58
USP54-212ENST00000480210 LOC110117498A0A087WWA1 95 aa5.15□□□□□ -1.59
USP54-212ENST00000480210 HAMPP81172 84 aa5.15□□□□□ -1.59
USP54-212ENST00000480210 RBM3P98179 157 aaKnown RBP5.15□□□□□ -1.59
USP54-212ENST00000480210 SERTAD4-AS1Q5TG53 156 aa5.15□□□□□ -1.59
USP54-212ENST00000480210 Q5VSD8 79 aa5.15□□□□□ -1.59
USP54-212ENST00000480210 PHF5AQ7RTV0 110 aaKnown RBP5.15□□□□□ -1.59
USP54-212ENST00000480210 PRR15Q8IV56 129 aa5.15□□□□□ -1.59
USP54-212ENST00000480210 C14orf132Q9NPU4 83 aa5.15□□□□□ -1.59
USP54-212ENST00000480210 OXTP01178 125 aa5.14□□□□□ -1.59
USP54-212ENST00000480210 KRTAP7-1Q8IUC3 87 aa5.14□□□□□ -1.59
USP54-212ENST00000480210 IGLV1-50A0A075B6I6 118 aa5.12□□□□□ -1.59
USP54-212ENST00000480210 A0A1B0GW54 56 aa5.12□□□□□ -1.59
USP54-212ENST00000480210 PRR3P79522 188 aaKnown RBP5.12□□□□□ -1.59
USP54-212ENST00000480210 BRK1Q8WUW1 75 aa5.12□□□□□ -1.59
USP54-212ENST00000480210 PSORS1C2Q9UIG4 136 aa5.12□□□□□ -1.59
USP54-212ENST00000480210 VPS13BQ7Z7G8 4022 aa5.11□□□□□ -1.59
USP54-212ENST00000480210 HERC2O95714 4834 aa5.11□□□□□ -1.59
USP54-212ENST00000480210 TRAV23DV6A0A075B6W5 121 aa5.11□□□□□ -1.59
USP54-212ENST00000480210 CD164Q04900 197 aa5.11□□□□□ -1.59
USP54-212ENST00000480210 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
USP54-212ENST00000480210 C1orf137Q5JT78 98 aa5.11□□□□□ -1.59
USP54-212ENST00000480210 SPINK6Q6UWN8 80 aa5.11□□□□□ -1.59
USP54-212ENST00000480210 SMIM11BQ8TCY0 68 aa5.11□□□□□ -1.59
USP54-212ENST00000480210 FAT1Q14517 4588 aa5.11□□□□□ -1.59
USP54-212ENST00000480210 A0A0U1RQV1 116 aa5.1□□□□□ -1.59
USP54-212ENST00000480210 PRYO14603 147 aa5.1□□□□□ -1.59
USP54-212ENST00000480210 SOSTDC1Q6X4U4 206 aa5.1□□□□□ -1.59
USP54-212ENST00000480210 FAM218AQ96MZ4 157 aa5.1□□□□□ -1.59
USP54-212ENST00000480210 KCNQ1DNQ9H478 68 aa5.1□□□□□ -1.59
USP54-212ENST00000480210 A0A087WVE0 104 aa5.09□□□□□ -1.59
USP54-212ENST00000480210 RPL37AP8A6NKH3 93 aa5.09□□□□□ -1.59
USP54-212ENST00000480210 F8WEM9 126 aa5.09□□□□□ -1.59
USP54-212ENST00000480210 J3QL48 77 aa5.09□□□□□ -1.59
USP54-212ENST00000480210 IGLV7-43P04211 117 aa5.09□□□□□ -1.59
USP54-212ENST00000480210 KRTAP10-4P60372 401 aaPredicted RBP5.09□□□□□ -1.59
USP54-212ENST00000480210 REG3GQ6UW15 175 aa5.09□□□□□ -1.59
USP54-212ENST00000480210 CYSTM1Q9H1C7 97 aa5.09□□□□□ -1.59
USP54-212ENST00000480210 H0Y9J4 135 aa5.08□□□□□ -1.6
USP54-212ENST00000480210 NCR3O14931 201 aa5.08□□□□□ -1.6
USP54-212ENST00000480210 ZNF861PO60384 105 aa5.08□□□□□ -1.6
USP54-212ENST00000480210 IGLV6-57P01721 117 aa5.08□□□□□ -1.6
USP54-212ENST00000480210 FP248Q71RG6 208 aaPredicted RBP5.08□□□□□ -1.6
USP54-212ENST00000480210 LINC00337Q8N6G1 96 aa5.08□□□□□ -1.6
USP54-212ENST00000480210 Q8NDZ9 215 aa5.08□□□□□ -1.6
USP54-212ENST00000480210 IGKV2-28A0A075B6P5 120 aa5.07□□□□□ -1.6
USP54-212ENST00000480210 IGKV2D-28P01615 120 aa5.07□□□□□ -1.6
USP54-212ENST00000480210 SPRR1AP35321 89 aa5.07□□□□□ -1.6
USP54-212ENST00000480210 Q1T7F1 81 aa5.07□□□□□ -1.6
USP54-212ENST00000480210 DIRC1Q969H9 104 aa5.07□□□□□ -1.6
USP54-212ENST00000480210 UBE2AP49459 152 aa5.06□□□□□ -1.6
USP54-212ENST00000480210 LINC01547P58512 204 aaPredicted RBP5.06□□□□□ -1.6
USP54-212ENST00000480210 KRTAP11-1Q8IUC1 163 aa5.06□□□□□ -1.6
USP54-212ENST00000480210 TMEM254Q8TBM7 123 aa5.06□□□□□ -1.6
USP54-212ENST00000480210 TRBV7-4A0A0J9YYF1 115 aa5.05□□□□□ -1.6
USP54-212ENST00000480210 ETDCA0A1B0GVM5 59 aa5.05□□□□□ -1.6
USP54-212ENST00000480210 NDUFB1O75438 58 aa5.05□□□□□ -1.6
USP54-212ENST00000480210 Q6ZQT0 140 aa5.05□□□□□ -1.6
USP54-212ENST00000480210 FAM19A1Q7Z5A9 133 aa5.05□□□□□ -1.6
USP54-212ENST00000480210 KRTAP17-1Q9BYP8 105 aa5.05□□□□□ -1.6
USP54-212ENST00000480210 NREPQ16612 68 aa5.04□□□□□ -1.6
USP54-212ENST00000480210 KRTAP4-5Q9BYR2 181 aa5.04□□□□□ -1.6
USP54-212ENST00000480210 ZNF73O43830 326 aaPredicted RBP5.03□□□□□ -1.6
USP54-212ENST00000480210 Q6ZVQ6 151 aa5.03□□□□□ -1.6
USP54-212ENST00000480210 KRTAP13-1Q8IUC0 172 aa5.03□□□□□ -1.6
USP54-212ENST00000480210 KRTAP4-16G5E9R7 235 aaPredicted RBP5.02□□□□□ -1.61
USP54-212ENST00000480210 NDUFS5O43920 106 aa5.02□□□□□ -1.61
USP54-212ENST00000480210 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.02□□□□□ -1.61
USP54-212ENST00000480210 PKHD1L1Q86WI1 4243 aa5.02□□□□□ -1.61
USP54-212ENST00000480210 KRTAP29-1A8MX34 341 aaPredicted RBP5.01□□□□□ -1.61
USP54-212ENST00000480210 BPY2O14599 106 aa5.01□□□□□ -1.61
USP54-212ENST00000480210 Q6ZRX8 168 aa5.01□□□□□ -1.61
USP54-212ENST00000480210 ZNF706Q9Y5V0 76 aaPredicted RBP5.01□□□□□ -1.61
USP54-212ENST00000480210 LINC00575Q6W349 94 aa5□□□□□ -1.61
USP54-212ENST00000480210 DHRS4-AS1Q9P1J3 65 aa5□□□□□ -1.61
USP54-212ENST00000480210 COX7BP24311 80 aa4.99□□□□□ -1.61
USP54-212ENST00000480210 PRLHP81277 87 aa4.99□□□□□ -1.61
USP54-212ENST00000480210 C6orf99Q4VX62 202 aa4.99□□□□□ -1.61
USP54-212ENST00000480210 SRRM2Q9UQ35 2752 aaKnown RBP4.99□□□□□ -1.61
USP54-212ENST00000480210 FLG2Q5D862 2391 aaPredicted RBP4.99□□□□□ -1.61
USP54-212ENST00000480210 ELOF1P60002 83 aaKnown RBP4.98□□□□□ -1.61
USP54-212ENST00000480210 HIGD2AQ9BW72 106 aa4.98□□□□□ -1.61
USP54-212ENST00000480210 CYP4F30PQ9H0H9 118 aa4.98□□□□□ -1.61
USP54-212ENST00000480210 SNURFQ9Y675 71 aa4.98□□□□□ -1.61
USP54-212ENST00000480210 FAM229BQ4G0N7 80 aa4.97□□□□□ -1.61
USP54-212ENST00000480210 LIMD2Q9BT23 127 aa4.97□□□□□ -1.61
USP54-212ENST00000480210 hDV103S1A0JD37 113 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms