RNA–Protein interactions for RNA: ENST00000479955.5

TRAPPC12-219, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-219ENST00000479955 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
TRAPPC12-219ENST00000479955 KRTAP3-2Q9BYR7 98 aa6.98□□□□□ -1.29
TRAPPC12-219ENST00000479955 F8WEM9 126 aa6.97□□□□□ -1.29
TRAPPC12-219ENST00000479955 PRR26Q8N8Z3 221 aa6.97□□□□□ -1.29
TRAPPC12-219ENST00000479955 TYMSOSQ8TAI1 123 aa6.97□□□□□ -1.29
TRAPPC12-219ENST00000479955 SPCS1Q9Y6A9 102 aa6.97□□□□□ -1.29
TRAPPC12-219ENST00000479955 PKHD1L1Q86WI1 4243 aa6.97□□□□□ -1.29
TRAPPC12-219ENST00000479955 A0A087X002 238 aa6.96□□□□□ -1.3
TRAPPC12-219ENST00000479955 SSBP3-AS1Q7Z2R9 100 aa6.96□□□□□ -1.3
TRAPPC12-219ENST00000479955 IGLV9-49A0A0B4J1Y8 123 aa6.95□□□□□ -1.3
TRAPPC12-219ENST00000479955 KRTAP10-8P60410 259 aa6.95□□□□□ -1.3
TRAPPC12-219ENST00000479955 GTF2H5Q6ZYL4 71 aa6.95□□□□□ -1.3
TRAPPC12-219ENST00000479955 SMIM29Q86T20 159 aa6.95□□□□□ -1.3
TRAPPC12-219ENST00000479955 BAALC-AS2P0C853 105 aa6.94□□□□□ -1.3
TRAPPC12-219ENST00000479955 UBE2V1Q13404 147 aa6.94□□□□□ -1.3
TRAPPC12-219ENST00000479955 C9orf153Q5TBE3 101 aa6.94□□□□□ -1.3
TRAPPC12-219ENST00000479955 Q8NBF4 154 aa6.94□□□□□ -1.3
TRAPPC12-219ENST00000479955 C9JAW5 83 aa6.93□□□□□ -1.3
TRAPPC12-219ENST00000479955 H3BMG7 143 aa6.93□□□□□ -1.3
TRAPPC12-219ENST00000479955 J3QL48 77 aa6.93□□□□□ -1.3
TRAPPC12-219ENST00000479955 NDUFV3P56181 108 aaKnown RBP6.93□□□□□ -1.3
TRAPPC12-219ENST00000479955 KRTAP13-2Q52LG2 175 aa6.93□□□□□ -1.3
TRAPPC12-219ENST00000479955 K7EP34 96 aa6.92□□□□□ -1.3
TRAPPC12-219ENST00000479955 MOBPQ13875 183 aa6.92□□□□□ -1.3
TRAPPC12-219ENST00000479955 C3orf22Q8N5N4 141 aa6.92□□□□□ -1.3
TRAPPC12-219ENST00000479955 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
TRAPPC12-219ENST00000479955 Q6JHZ5 121 aa6.91□□□□□ -1.3
TRAPPC12-219ENST00000479955 SPAG11AQ6PDA7 123 aa6.91□□□□□ -1.3
TRAPPC12-219ENST00000479955 IGLV8-61A0A075B6I0 122 aa6.9□□□□□ -1.3
TRAPPC12-219ENST00000479955 H3BT86 120 aa6.9□□□□□ -1.3
TRAPPC12-219ENST00000479955 ANKRD29Q8N6D5 301 aa6.9□□□□□ -1.3
TRAPPC12-219ENST00000479955 ABCA13Q86UQ4 5058 aa6.9□□□□□ -1.31
TRAPPC12-219ENST00000479955 FLG2Q5D862 2391 aaPredicted RBP6.9□□□□□ -1.31
TRAPPC12-219ENST00000479955 JMJD7-PLA2G4BH0Y9G9 81 aa6.88□□□□□ -1.31
TRAPPC12-219ENST00000479955 MT1HL1P0DM35 61 aa6.88□□□□□ -1.31
TRAPPC12-219ENST00000479955 LINC00304Q8N9R0 145 aa6.88□□□□□ -1.31
TRAPPC12-219ENST00000479955 SPINK1P00995 79 aa6.86□□□□□ -1.31
TRAPPC12-219ENST00000479955 RBM3P98179 157 aaKnown RBP6.86□□□□□ -1.31
TRAPPC12-219ENST00000479955 CD164Q04900 197 aa6.86□□□□□ -1.31
TRAPPC12-219ENST00000479955 F8W1H4 67 aa6.85□□□□□ -1.31
TRAPPC12-219ENST00000479955 DSCR8Q96T75 97 aa6.85□□□□□ -1.31
TRAPPC12-219ENST00000479955 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.31
TRAPPC12-219ENST00000479955 PCLOQ9Y6V0 5065 aa6.84□□□□□ -1.32
TRAPPC12-219ENST00000479955 LRP1Q07954 4544 aaKnown RBP6.83□□□□□ -1.32
TRAPPC12-219ENST00000479955 RPS29P62273 56 aaKnown RBP6.83□□□□□ -1.32
TRAPPC12-219ENST00000479955 C21orf62-AS1Q17RA5 79 aa6.83□□□□□ -1.32
TRAPPC12-219ENST00000479955 IGFL1Q6UW32 110 aa6.83□□□□□ -1.32
TRAPPC12-219ENST00000479955 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
TRAPPC12-219ENST00000479955 PDE6GP18545 87 aa6.82□□□□□ -1.32
TRAPPC12-219ENST00000479955 MTURNQ8N3F0 131 aa6.82□□□□□ -1.32
TRAPPC12-219ENST00000479955 TEN1Q86WV5 123 aa6.81□□□□□ -1.32
TRAPPC12-219ENST00000479955 PRO0461Q9UI25 63 aa6.81□□□□□ -1.32
TRAPPC12-219ENST00000479955 A0A1B0GV72 72 aa6.8□□□□□ -1.32
TRAPPC12-219ENST00000479955 A0A1B0GV90 55 aa6.8□□□□□ -1.32
TRAPPC12-219ENST00000479955 Q6Q795 121 aa6.8□□□□□ -1.32
TRAPPC12-219ENST00000479955 OBSCN-AS1Q96MR7 158 aa6.8□□□□□ -1.32
TRAPPC12-219ENST00000479955 LIMD2Q9BT23 127 aa6.8□□□□□ -1.32
TRAPPC12-219ENST00000479955 TRBV7-4A0A0J9YYF1 115 aa6.79□□□□□ -1.32
TRAPPC12-219ENST00000479955 SMCPP49901 116 aaPredicted RBP6.79□□□□□ -1.32
TRAPPC12-219ENST00000479955 HRCT1Q6UXD1 115 aa6.79□□□□□ -1.32
TRAPPC12-219ENST00000479955 LOC110117498A0A087WWA1 95 aa6.78□□□□□ -1.32
TRAPPC12-219ENST00000479955 CCKP06307 115 aa6.78□□□□□ -1.32
TRAPPC12-219ENST00000479955 A0A0G2JQZ4 141 aa6.77□□□□□ -1.33
TRAPPC12-219ENST00000479955 TRBV7-7A0A0K0K1E9 115 aa6.77□□□□□ -1.33
TRAPPC12-219ENST00000479955 A0A1B0GW54 56 aa6.77□□□□□ -1.33
TRAPPC12-219ENST00000479955 Q5XG85 94 aa6.76□□□□□ -1.33
TRAPPC12-219ENST00000479955 TNXBP22105 4242 aa6.75□□□□□ -1.33
TRAPPC12-219ENST00000479955 A0A1W2PNM2 257 aa6.75□□□□□ -1.33
TRAPPC12-219ENST00000479955 C14orf132Q9NPU4 83 aa6.75□□□□□ -1.33
TRAPPC12-219ENST00000479955 SS18L2Q9UHA2 77 aa6.75□□□□□ -1.33
TRAPPC12-219ENST00000479955 Q6ZQT0 140 aa6.74□□□□□ -1.33
TRAPPC12-219ENST00000479955 VPS25Q9BRG1 176 aa6.74□□□□□ -1.33
TRAPPC12-219ENST00000479955 DMBT1Q9UGM3 2413 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC12-219ENST00000479955 ETDBQ3ZM63 59 aa6.72□□□□□ -1.33
TRAPPC12-219ENST00000479955 ASB16-AS1Q495Z4 193 aa6.72□□□□□ -1.33
TRAPPC12-219ENST00000479955 A0A087WSZ3 146 aa6.71□□□□□ -1.34
TRAPPC12-219ENST00000479955 FP248Q71RG6 208 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC12-219ENST00000479955 PRR4Q16378 134 aa6.65□□□□□ -1.34
TRAPPC12-219ENST00000479955 C1orf195Q5TG92 126 aa6.65□□□□□ -1.34
TRAPPC12-219ENST00000479955 RETNLBQ9BQ08 111 aa6.65□□□□□ -1.34
TRAPPC12-219ENST00000479955 NREPQ16612 68 aa6.63□□□□□ -1.35
TRAPPC12-219ENST00000479955 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
TRAPPC12-219ENST00000479955 ACYP1P07311 99 aa6.62□□□□□ -1.35
TRAPPC12-219ENST00000479955 J3KT08 172 aa6.61□□□□□ -1.35
TRAPPC12-219ENST00000479955 LINC00472Q9H8W2 130 aa6.61□□□□□ -1.35
TRAPPC12-219ENST00000479955 J3QR89 54 aa6.6□□□□□ -1.35
TRAPPC12-219ENST00000479955 UBL5Q9BZL1 73 aa6.59□□□□□ -1.35
TRAPPC12-219ENST00000479955 IGKV4-1P06312 121 aa6.58□□□□□ -1.36
TRAPPC12-219ENST00000479955 Q96NJ1 140 aa6.58□□□□□ -1.36
TRAPPC12-219ENST00000479955 FAM240AA0A1B0GVK7 77 aa6.57□□□□□ -1.36
TRAPPC12-219ENST00000479955 SIGMAR1Q99720 223 aa6.56□□□□□ -1.36
TRAPPC12-219ENST00000479955 LINC00846Q9NV44 126 aa6.56□□□□□ -1.36
TRAPPC12-219ENST00000479955 NDUFB1O75438 58 aa6.55□□□□□ -1.36
TRAPPC12-219ENST00000479955 TPRXLQ17RH7 258 aa6.55□□□□□ -1.36
TRAPPC12-219ENST00000479955 Q6ZVQ6 151 aa6.55□□□□□ -1.36
TRAPPC12-219ENST00000479955 HERC1Q15751 4861 aa6.54□□□□□ -1.36
TRAPPC12-219ENST00000479955 BPY2O14599 106 aa6.54□□□□□ -1.36
TRAPPC12-219ENST00000479955 DEFB116Q30KQ4 102 aa6.54□□□□□ -1.36
TRAPPC12-219ENST00000479955 KRTAP13-3Q3SY46 172 aa6.52□□□□□ -1.37
TRAPPC12-219ENST00000479955 A8MWP4 228 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms