RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 GAGE2AQ6NT46 116 aa8.55□□□□□ -1.04
RPP40-205ENST00000479782 EPPK1P58107 5090 aaKnown RBP8.54□□□□□ -1.04
RPP40-205ENST00000479782 LINC00483Q53H64 154 aa8.54□□□□□ -1.04
RPP40-205ENST00000479782 NDUFV3P56181 108 aaKnown RBP8.51□□□□□ -1.05
RPP40-205ENST00000479782 SMIM29Q86T20 159 aa8.5□□□□□ -1.05
RPP40-205ENST00000479782 LAMTOR3Q9UHA4 124 aa8.5□□□□□ -1.05
RPP40-205ENST00000479782 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
RPP40-205ENST00000479782 F8WEM9 126 aa8.48□□□□□ -1.05
RPP40-205ENST00000479782 JMJD7-PLA2G4BH0Y9G9 81 aa8.48□□□□□ -1.05
RPP40-205ENST00000479782 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
RPP40-205ENST00000479782 C3orf22Q8N5N4 141 aa8.48□□□□□ -1.05
RPP40-205ENST00000479782 KRTAP17-1Q9BYP8 105 aa8.48□□□□□ -1.05
RPP40-205ENST00000479782 VPS13BQ7Z7G8 4022 aa8.47□□□□□ -1.05
RPP40-205ENST00000479782 KRTAP1-4P0C5Y4 121 aa8.47□□□□□ -1.05
RPP40-205ENST00000479782 TEN1Q86WV5 123 aa8.47□□□□□ -1.05
RPP40-205ENST00000479782 RBM3P98179 157 aaKnown RBP8.45□□□□□ -1.06
RPP40-205ENST00000479782 OBSCN-AS1Q96MR7 158 aa8.45□□□□□ -1.06
RPP40-205ENST00000479782 ANAPC11Q9NYG5 84 aa8.45□□□□□ -1.06
RPP40-205ENST00000479782 HSPG2P98160 4391 aa8.45□□□□□ -1.06
RPP40-205ENST00000479782 RYR1P21817 5038 aa8.44□□□□□ -1.06
RPP40-205ENST00000479782 IGLV8-61A0A075B6I0 122 aa8.44□□□□□ -1.06
RPP40-205ENST00000479782 ETDBQ3ZM63 59 aa8.44□□□□□ -1.06
RPP40-205ENST00000479782 CRYGAP11844 174 aa8.43□□□□□ -1.06
RPP40-205ENST00000479782 IGLV9-49A0A0B4J1Y8 123 aa8.42□□□□□ -1.06
RPP40-205ENST00000479782 Q8NBF4 154 aa8.42□□□□□ -1.06
RPP40-205ENST00000479782 DSCR8Q96T75 97 aa8.42□□□□□ -1.06
RPP40-205ENST00000479782 A0A1B0GV72 72 aa8.41□□□□□ -1.06
RPP40-205ENST00000479782 C9orf153Q5TBE3 101 aa8.41□□□□□ -1.06
RPP40-205ENST00000479782 Q6JHZ5 121 aa8.41□□□□□ -1.06
RPP40-205ENST00000479782 SRRM2Q9UQ35 2752 aaKnown RBP8.41□□□□□ -1.06
RPP40-205ENST00000479782 A0A087X002 238 aa8.4□□□□□ -1.06
RPP40-205ENST00000479782 TRBV7-4A0A0J9YYF1 115 aa8.4□□□□□ -1.06
RPP40-205ENST00000479782 PDE6GP18545 87 aa8.4□□□□□ -1.06
RPP40-205ENST00000479782 KIAA1109Q2LD37 5005 aa8.4□□□□□ -1.06
RPP40-205ENST00000479782 MOBPQ13875 183 aa8.39□□□□□ -1.07
RPP40-205ENST00000479782 C21orf62-AS1Q17RA5 79 aa8.39□□□□□ -1.07
RPP40-205ENST00000479782 C14orf132Q9NPU4 83 aa8.39□□□□□ -1.07
RPP40-205ENST00000479782 LOC110117498A0A087WWA1 95 aa8.38□□□□□ -1.07
RPP40-205ENST00000479782 KRTAP13-2Q52LG2 175 aa8.38□□□□□ -1.07
RPP40-205ENST00000479782 SSBP3-AS1Q7Z2R9 100 aa8.38□□□□□ -1.07
RPP40-205ENST00000479782 FAT1Q14517 4588 aa8.37□□□□□ -1.07
RPP40-205ENST00000479782 IGFL1Q6UW32 110 aa8.36□□□□□ -1.07
RPP40-205ENST00000479782 Q6ZQT0 140 aa8.35□□□□□ -1.07
RPP40-205ENST00000479782 BIRC6Q9NR09 4857 aa8.35□□□□□ -1.07
RPP40-205ENST00000479782 C4orf48Q5BLP8 95 aa8.34□□□□□ -1.07
RPP40-205ENST00000479782 PRR26Q8N8Z3 221 aa8.34□□□□□ -1.07
RPP40-205ENST00000479782 TYMSOSQ8TAI1 123 aa8.34□□□□□ -1.07
RPP40-205ENST00000479782 KRTAP4-5Q9BYR2 181 aa8.33□□□□□ -1.08
RPP40-205ENST00000479782 CCKP06307 115 aa8.32□□□□□ -1.08
RPP40-205ENST00000479782 Q6Q795 121 aa8.32□□□□□ -1.08
RPP40-205ENST00000479782 PKHD1L1Q86WI1 4243 aa8.31□□□□□ -1.08
RPP40-205ENST00000479782 A0A1B0GW54 56 aa8.3□□□□□ -1.08
RPP40-205ENST00000479782 CD164Q04900 197 aa8.3□□□□□ -1.08
RPP40-205ENST00000479782 A0A0G2JQZ4 141 aa8.29□□□□□ -1.08
RPP40-205ENST00000479782 A0A1W2PNM2 257 aa8.29□□□□□ -1.08
RPP40-205ENST00000479782 OXTP01178 125 aa8.29□□□□□ -1.08
RPP40-205ENST00000479782 VPS25Q9BRG1 176 aa8.29□□□□□ -1.08
RPP40-205ENST00000479782 J3QR89 54 aa8.28□□□□□ -1.08
RPP40-205ENST00000479782 KRTAP10-8P60410 259 aa8.26□□□□□ -1.09
RPP40-205ENST00000479782 TRBV7-7A0A0K0K1E9 115 aa8.25□□□□□ -1.09
RPP40-205ENST00000479782 SPAG11AQ6PDA7 123 aa8.25□□□□□ -1.09
RPP40-205ENST00000479782 LINC00304Q8N9R0 145 aa8.25□□□□□ -1.09
RPP40-205ENST00000479782 LOC100996750A0A140TA64 210 aa8.24□□□□□ -1.09
RPP40-205ENST00000479782 FAM240AA0A1B0GVK7 77 aa8.24□□□□□ -1.09
RPP40-205ENST00000479782 ACYP1P07311 99 aa8.24□□□□□ -1.09
RPP40-205ENST00000479782 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
RPP40-205ENST00000479782 KRTAP4-6Q9BYQ5 205 aa8.24□□□□□ -1.09
RPP40-205ENST00000479782 K7ERU9 68 aa8.23□□□□□ -1.09
RPP40-205ENST00000479782 SPINK1P00995 79 aa8.23□□□□□ -1.09
RPP40-205ENST00000479782 KRTAP29-1A8MX34 341 aaPredicted RBP8.22□□□□□ -1.09
RPP40-205ENST00000479782 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
RPP40-205ENST00000479782 A0A087WSZ3 146 aa8.21□□□□□ -1.1
RPP40-205ENST00000479782 SS18L2Q9UHA2 77 aa8.21□□□□□ -1.1
RPP40-205ENST00000479782 HERC2O95714 4834 aa8.19□□□□□ -1.1
RPP40-205ENST00000479782 MT1HL1P0DM35 61 aa8.19□□□□□ -1.1
RPP40-205ENST00000479782 Q5XG85 94 aa8.19□□□□□ -1.1
RPP40-205ENST00000479782 LIMD2Q9BT23 127 aa8.19□□□□□ -1.1
RPP40-205ENST00000479782 LINC00846Q9NV44 126 aa8.17□□□□□ -1.1
RPP40-205ENST00000479782 UBL5Q9BZL1 73 aa8.16□□□□□ -1.1
RPP40-205ENST00000479782 NREPQ16612 68 aa8.15□□□□□ -1.1
RPP40-205ENST00000479782 ASB16-AS1Q495Z4 193 aa8.15□□□□□ -1.1
RPP40-205ENST00000479782 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
RPP40-205ENST00000479782 Q6ZVQ6 151 aa8.12□□□□□ -1.11
RPP40-205ENST00000479782 LINC00472Q9H8W2 130 aa8.09□□□□□ -1.11
RPP40-205ENST00000479782 LRP1Q07954 4544 aaKnown RBP8.09□□□□□ -1.11
RPP40-205ENST00000479782 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
RPP40-205ENST00000479782 Q96NJ1 140 aa8.08□□□□□ -1.12
RPP40-205ENST00000479782 CDIP1Q9H305 208 aa8.07□□□□□ -1.12
RPP40-205ENST00000479782 J3KT08 172 aa8.06□□□□□ -1.12
RPP40-205ENST00000479782 C1orf195Q5TG92 126 aa8.06□□□□□ -1.12
RPP40-205ENST00000479782 LINC00643Q86TS7 51 aa8.06□□□□□ -1.12
RPP40-205ENST00000479782 ATP5EP2Q5VTU8 51 aa8.05□□□□□ -1.12
RPP40-205ENST00000479782 SIGMAR1Q99720 223 aa8.05□□□□□ -1.12
RPP40-205ENST00000479782 MYCBP2O75592 4640 aa8.05□□□□□ -1.12
RPP40-205ENST00000479782 TNXBP22105 4242 aa8.05□□□□□ -1.12
RPP40-205ENST00000479782 BPY2O14599 106 aa8.04□□□□□ -1.12
RPP40-205ENST00000479782 ABCA13Q86UQ4 5058 aa8.03□□□□□ -1.12
RPP40-205ENST00000479782 CXCL6P80162 114 aa8.03□□□□□ -1.12
RPP40-205ENST00000479782 DEFB116Q30KQ4 102 aa8.03□□□□□ -1.12
RPP40-205ENST00000479782 IGKV4-1P06312 121 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms