RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 FP248Q71RG6 208 aaPredicted RBP15.36■□□□□ 0.05
SYNGAP1-206ENST00000479510 C9orf163Q8N9P6 203 aa15.36■□□□□ 0.05
SYNGAP1-206ENST00000479510 ZCCHC13Q8WW36 166 aaKnown RBP15.36■□□□□ 0.05
SYNGAP1-206ENST00000479510 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.35■□□□□ 0.05
SYNGAP1-206ENST00000479510 A0A087WSZ3 146 aa15.34■□□□□ 0.05
SYNGAP1-206ENST00000479510 LINC00474Q9P2X8 69 aa15.34■□□□□ 0.05
SYNGAP1-206ENST00000479510 NBEAL1Q6ZS30 2694 aa15.34■□□□□ 0.05
SYNGAP1-206ENST00000479510 PHF5AQ7RTV0 110 aaKnown RBP15.34■□□□□ 0.05
SYNGAP1-206ENST00000479510 A0A0G2JQZ4 141 aa15.32■□□□□ 0.04
SYNGAP1-206ENST00000479510 CHTF8P0CG12 524 aa15.3■□□□□ 0.04
SYNGAP1-206ENST00000479510 LRCOL1A6NCL2 159 aa15.29■□□□□ 0.04
SYNGAP1-206ENST00000479510 KRTAP11-1Q8IUC1 163 aa15.29■□□□□ 0.04
SYNGAP1-206ENST00000479510 B9D2Q9BPU9 175 aa15.28■□□□□ 0.04
SYNGAP1-206ENST00000479510 NBDYA0A0U1RRE5 68 aa15.24■□□□□ 0.03
SYNGAP1-206ENST00000479510 KRTAP29-1A8MX34 341 aaPredicted RBP15.22■□□□□ 0.03
SYNGAP1-206ENST00000479510 DEFB116Q30KQ4 102 aa15.21■□□□□ 0.03
SYNGAP1-206ENST00000479510 NDUFB1O75438 58 aa15.2■□□□□ 0.02
SYNGAP1-206ENST00000479510 KRTAP13-1Q8IUC0 172 aa15.2■□□□□ 0.02
SYNGAP1-206ENST00000479510 PRR15Q8IV56 129 aa15.2■□□□□ 0.02
SYNGAP1-206ENST00000479510 NUPR2A6NF83 97 aa15.19■□□□□ 0.02
SYNGAP1-206ENST00000479510 Q6ZRN7 208 aaPredicted RBP15.19■□□□□ 0.02
SYNGAP1-206ENST00000479510 LINC00472Q9H8W2 130 aa15.19■□□□□ 0.02
SYNGAP1-206ENST00000479510 A8MWP4 228 aa15.18■□□□□ 0.02
SYNGAP1-206ENST00000479510 MP68P56378 58 aa15.18■□□□□ 0.02
SYNGAP1-206ENST00000479510 WFDC13Q8IUB5 93 aa15.18■□□□□ 0.02
SYNGAP1-206ENST00000479510 DYNC2H1Q8NCM8 4307 aaKnown RBP15.17■□□□□ 0.02
SYNGAP1-206ENST00000479510 hDV103S1A0JD37 113 aa15.16■□□□□ 0.02
SYNGAP1-206ENST00000479510 FAM229BQ4G0N7 80 aa15.15■□□□□ 0.02
SYNGAP1-206ENST00000479510 STAB2Q8WWQ8 2551 aa15.15■□□□□ 0.02
SYNGAP1-206ENST00000479510 CYP4F30PQ9H0H9 118 aa15.14■□□□□ 0.01
SYNGAP1-206ENST00000479510 DNAH10Q8IVF4 4471 aa15.14■□□□□ 0.01
SYNGAP1-206ENST00000479510 H3BPC8 53 aa15.13■□□□□ 0.01
SYNGAP1-206ENST00000479510 RPL37AP61513 92 aaKnown RBP15.13■□□□□ 0.01
SYNGAP1-206ENST00000479510 CASC2Q6XLA1 102 aa15.13■□□□□ 0.01
SYNGAP1-206ENST00000479510 MDFIQ99750 246 aa15.13■□□□□ 0.01
SYNGAP1-206ENST00000479510 MGAM2Q2M2H8 2515 aa15.12■□□□□ 0.01
SYNGAP1-206ENST00000479510 DNAH9Q9NYC9 4486 aa15.09■□□□□ 0.01
SYNGAP1-206ENST00000479510 SPACA4Q8TDM5 124 aa15.09■□□□□ 0.01
SYNGAP1-206ENST00000479510 LINC00336Q6ZUF6 198 aa15.08■□□□□ 0.01
SYNGAP1-206ENST00000479510 PANO1I0J062 215 aa15.07■□□□□ 0
SYNGAP1-206ENST00000479510 PRO0628Q9UI54 55 aa15.07■□□□□ 0
SYNGAP1-206ENST00000479510 TRAV22A0A0B4J277 110 aa15.06■□□□□ 0
SYNGAP1-206ENST00000479510 C1orf64Q8NEQ6 169 aa15.06■□□□□ 0
SYNGAP1-206ENST00000479510 LINC00483Q53H64 154 aa15.03■□□□□ -0
SYNGAP1-206ENST00000479510 MPLKIPQ8TAP9 179 aa15.01□□□□□ -0.01
SYNGAP1-206ENST00000479510 LINC00208Q96KT6 92 aa15.01□□□□□ -0.01
SYNGAP1-206ENST00000479510 H0Y9P7 68 aa15.01□□□□□ -0.01
SYNGAP1-206ENST00000479510 COL7A1Q02388 2944 aa15□□□□□ -0.01
SYNGAP1-206ENST00000479510 SPANXA2-OT1Q8N9U9 137 aa15□□□□□ -0.01
SYNGAP1-206ENST00000479510 ZNF706Q9Y5V0 76 aaPredicted RBP15□□□□□ -0.01
SYNGAP1-206ENST00000479510 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15□□□□□ -0.01
SYNGAP1-206ENST00000479510 LYSTQ99698 3801 aa14.97□□□□□ -0.01
SYNGAP1-206ENST00000479510 Q1T7F1 81 aa14.97□□□□□ -0.01
SYNGAP1-206ENST00000479510 A0A087WTM6 91 aa14.96□□□□□ -0.01
SYNGAP1-206ENST00000479510 MMP24-AS1A0A0U1RRL7 71 aa14.96□□□□□ -0.01
SYNGAP1-206ENST00000479510 Q96NJ1 140 aa14.92□□□□□ -0.02
SYNGAP1-206ENST00000479510 ASB16-AS1Q495Z4 193 aa14.91□□□□□ -0.02
SYNGAP1-206ENST00000479510 IGLV9-49A0A0B4J1Y8 123 aa14.9□□□□□ -0.02
SYNGAP1-206ENST00000479510 MOBPQ13875 183 aa14.9□□□□□ -0.02
SYNGAP1-206ENST00000479510 TP53AIP1Q9HCN2 124 aa14.88□□□□□ -0.03
SYNGAP1-206ENST00000479510 IGLV5-52A0A0A0MRZ9 124 aa14.87□□□□□ -0.03
SYNGAP1-206ENST00000479510 PLAC8Q9NZF1 115 aa14.86□□□□□ -0.03
SYNGAP1-206ENST00000479510 RTL8CO15255 209 aa14.86□□□□□ -0.03
SYNGAP1-206ENST00000479510 PRR4Q16378 134 aa14.85□□□□□ -0.03
SYNGAP1-206ENST00000479510 WWC2-AS2Q96NR7 200 aa14.85□□□□□ -0.03
SYNGAP1-206ENST00000479510 PLECQ15149 4684 aaKnown RBP14.83□□□□□ -0.03
SYNGAP1-206ENST00000479510 PSORS1C2Q9UIG4 136 aa14.83□□□□□ -0.03
SYNGAP1-206ENST00000479510 SRRM2Q9UQ35 2752 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-206ENST00000479510 Q6ZR54 194 aa14.82□□□□□ -0.04
SYNGAP1-206ENST00000479510 V9GYY9 64 aa14.82□□□□□ -0.04
SYNGAP1-206ENST00000479510 ZNF861PO60384 105 aa14.81□□□□□ -0.04
SYNGAP1-206ENST00000479510 BRK1Q8WUW1 75 aa14.81□□□□□ -0.04
SYNGAP1-206ENST00000479510 DNAH7Q8WXX0 4024 aa14.81□□□□□ -0.04
SYNGAP1-206ENST00000479510 CSMD3Q7Z407 3707 aa14.81□□□□□ -0.04
SYNGAP1-206ENST00000479510 C8orf17Q9NRJ1 99 aa14.8□□□□□ -0.04
SYNGAP1-206ENST00000479510 VPS13DQ5THJ4 4388 aa14.78□□□□□ -0.04
SYNGAP1-206ENST00000479510 A0A1B0GVX0 72 aa14.77□□□□□ -0.05
SYNGAP1-206ENST00000479510 TENM2Q9NT68 2774 aa14.76□□□□□ -0.05
SYNGAP1-206ENST00000479510 CDK2AP2O75956 126 aa14.73□□□□□ -0.05
SYNGAP1-206ENST00000479510 DNHD1Q96M86 4753 aa14.73□□□□□ -0.05
SYNGAP1-206ENST00000479510 IGLV7-46A0A075B6I9 117 aa14.72□□□□□ -0.05
SYNGAP1-206ENST00000479510 C1orf195Q5TG92 126 aa14.67□□□□□ -0.06
SYNGAP1-206ENST00000479510 IGHV6-1A0A0B4J1U7 121 aa14.67□□□□□ -0.06
SYNGAP1-206ENST00000479510 MRPL34Q9BQ48 92 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-206ENST00000479510 C1orf134Q5TEV5 83 aa14.64□□□□□ -0.07
SYNGAP1-206ENST00000479510 IGLV7-43P04211 117 aa14.62□□□□□ -0.07
SYNGAP1-206ENST00000479510 CD164Q04900 197 aa14.61□□□□□ -0.07
SYNGAP1-206ENST00000479510 LIMD2Q9BT23 127 aa14.61□□□□□ -0.07
SYNGAP1-206ENST00000479510 PSPHP1O15172 72 aa14.6□□□□□ -0.07
SYNGAP1-206ENST00000479510 ANAPC11Q9NYG5 84 aa14.6□□□□□ -0.07
SYNGAP1-206ENST00000479510 STARD9Q9P2P6 4700 aa14.59□□□□□ -0.07
SYNGAP1-206ENST00000479510 NDUFS5O43920 106 aa14.57□□□□□ -0.08
SYNGAP1-206ENST00000479510 Q8N9P0 234 aaPredicted RBP14.57□□□□□ -0.08
SYNGAP1-206ENST00000479510 DNAH17Q9UFH2 4485 aa14.57□□□□□ -0.08
SYNGAP1-206ENST00000479510 PRKDCP78527 4128 aaKnown RBP14.57□□□□□ -0.08
SYNGAP1-206ENST00000479510 HECTD4Q9Y4D8 3996 aa14.56□□□□□ -0.08
SYNGAP1-206ENST00000479510 COA5Q86WW8 74 aa14.56□□□□□ -0.08
SYNGAP1-206ENST00000479510 A8MUN3 132 aa14.53□□□□□ -0.08
SYNGAP1-206ENST00000479510 SSBP3-AS1Q7Z2R9 100 aa14.53□□□□□ -0.08
SYNGAP1-206ENST00000479510 PCOTHQ58A44 107 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms