RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 K7EIL1 84 aa3.21□□□□□ -1.9
SF3B6-202ENST00000478050 TM2D3Q9BRN9 247 aa3.21□□□□□ -1.9
SF3B6-202ENST00000478050 UPK3BQ9BT76 320 aa3.21□□□□□ -1.9
SF3B6-202ENST00000478050 KCNQ1DNQ9H478 68 aa3.21□□□□□ -1.9
SF3B6-202ENST00000478050 KIAA1109Q2LD37 5005 aa3.21□□□□□ -1.9
SF3B6-202ENST00000478050 ABCA13Q86UQ4 5058 aa3.2□□□□□ -1.9
SF3B6-202ENST00000478050 DMBT1Q9UGM3 2413 aaPredicted RBP3.2□□□□□ -1.9
SF3B6-202ENST00000478050 CXCL6P80162 114 aa3.2□□□□□ -1.9
SF3B6-202ENST00000478050 Q6ZVQ6 151 aa3.2□□□□□ -1.9
SF3B6-202ENST00000478050 FAM19A1Q7Z5A9 133 aa3.2□□□□□ -1.9
SF3B6-202ENST00000478050 SMIM20Q8N5G0 67 aa3.2□□□□□ -1.9
SF3B6-202ENST00000478050 LINC00588Q9Y4M8 146 aa3.2□□□□□ -1.9
SF3B6-202ENST00000478050 M0R2N4 97 aa3.19□□□□□ -1.9
SF3B6-202ENST00000478050 LINC01547P58512 204 aaPredicted RBP3.19□□□□□ -1.9
SF3B6-202ENST00000478050 HAMPP81172 84 aa3.19□□□□□ -1.9
SF3B6-202ENST00000478050 C7orf33Q8WU49 177 aa3.19□□□□□ -1.9
SF3B6-202ENST00000478050 DHRS4-AS1Q9P1J3 65 aa3.19□□□□□ -1.9
SF3B6-202ENST00000478050 HUWE1Q7Z6Z7 4374 aaKnown RBP3.19□□□□□ -1.9
SF3B6-202ENST00000478050 HERC1Q15751 4861 aa3.18□□□□□ -1.9
SF3B6-202ENST00000478050 TRAV7A0A075B6U4 112 aa3.18□□□□□ -1.9
SF3B6-202ENST00000478050 LOC107984640A0A0U1RRK4 108 aa3.18□□□□□ -1.9
SF3B6-202ENST00000478050 A0A1B0GW54 56 aa3.18□□□□□ -1.9
SF3B6-202ENST00000478050 TMEM258P61165 79 aa3.18□□□□□ -1.9
SF3B6-202ENST00000478050 DNAH9Q9NYC9 4486 aa3.18□□□□□ -1.9
SF3B6-202ENST00000478050 LYSTQ99698 3801 aa3.18□□□□□ -1.9
SF3B6-202ENST00000478050 ETDCA0A1B0GVM5 59 aa3.17□□□□□ -1.9
SF3B6-202ENST00000478050 SPRR1AP35321 89 aa3.17□□□□□ -1.9
SF3B6-202ENST00000478050 Q6ZRX8 168 aa3.17□□□□□ -1.9
SF3B6-202ENST00000478050 IGLV1-50A0A075B6I6 118 aa3.16□□□□□ -1.9
SF3B6-202ENST00000478050 IGLV5-48A0A075B6I7 105 aa3.16□□□□□ -1.9
SF3B6-202ENST00000478050 KRTAP4-16G5E9R7 235 aaPredicted RBP3.16□□□□□ -1.9
SF3B6-202ENST00000478050 J3KT08 172 aa3.16□□□□□ -1.9
SF3B6-202ENST00000478050 RPS28P62857 69 aaKnown RBP3.16□□□□□ -1.9
SF3B6-202ENST00000478050 Q8N377 158 aa3.16□□□□□ -1.9
SF3B6-202ENST00000478050 FUSP35637 526 aaKnown RBP eCLIP3.15□□□□□ -1.91
SF3B6-202ENST00000478050 NREPQ16612 68 aa3.15□□□□□ -1.91
SF3B6-202ENST00000478050 MRPL55Q7Z7F7 128 aaKnown RBP3.15□□□□□ -1.91
SF3B6-202ENST00000478050 CSMD3Q7Z407 3707 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 IGLV9-49A0A0B4J1Y8 123 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 FAM168BA1KXE4 195 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 RPL37AP8A6NKH3 93 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 C14orf177Q52M58 125 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 REG3GQ6UW15 175 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 SCXQ7RTU7 201 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 FAM19A5Q7Z5A7 132 aaPredicted RBP3.14□□□□□ -1.91
SF3B6-202ENST00000478050 DEFB105AQ8NG35 78 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 Q9BRP9 147 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 PKIGQ9Y2B9 76 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 FRAS1Q86XX4 4008 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 HECTD4Q9Y4D8 3996 aa3.14□□□□□ -1.91
SF3B6-202ENST00000478050 C16orf90A8MZG2 172 aa3.13□□□□□ -1.91
SF3B6-202ENST00000478050 CNBPP62633 177 aaKnown RBP3.13□□□□□ -1.91
SF3B6-202ENST00000478050 UBE2BP63146 152 aa3.13□□□□□ -1.91
SF3B6-202ENST00000478050 KLKP1Q107X0 134 aa3.13□□□□□ -1.91
SF3B6-202ENST00000478050 KRTAP7-1Q8IUC3 87 aa3.13□□□□□ -1.91
SF3B6-202ENST00000478050 UBE2DNLQ8IWF7 75 aa3.13□□□□□ -1.91
SF3B6-202ENST00000478050 C20orf197Q8N268 126 aa3.13□□□□□ -1.91
SF3B6-202ENST00000478050 Q8NBF4 154 aa3.13□□□□□ -1.91
SF3B6-202ENST00000478050 CYSTM1Q9H1C7 97 aa3.13□□□□□ -1.91
SF3B6-202ENST00000478050 DNAH7Q8WXX0 4024 aa3.13□□□□□ -1.91
SF3B6-202ENST00000478050 BPY2O14599 106 aa3.12□□□□□ -1.91
SF3B6-202ENST00000478050 PSCAO43653 123 aa3.12□□□□□ -1.91
SF3B6-202ENST00000478050 NDUFC1O43677 76 aa3.12□□□□□ -1.91
SF3B6-202ENST00000478050 ERC2-IT1O76042 136 aa3.12□□□□□ -1.91
SF3B6-202ENST00000478050 IGKV4-1P06312 121 aa3.12□□□□□ -1.91
SF3B6-202ENST00000478050 C1orf137Q5JT78 98 aa3.12□□□□□ -1.91
SF3B6-202ENST00000478050 DPH3Q96FX2 82 aa3.12□□□□□ -1.91
SF3B6-202ENST00000478050 SPRR4Q96PI1 79 aa3.12□□□□□ -1.91
SF3B6-202ENST00000478050 A0A096LNI7 61 aa3.11□□□□□ -1.91
SF3B6-202ENST00000478050 FAM236DA0A1B0GTK5 79 aa3.11□□□□□ -1.91
SF3B6-202ENST00000478050 A0A1W2PNM2 257 aa3.11□□□□□ -1.91
SF3B6-202ENST00000478050 F8WEM9 126 aa3.11□□□□□ -1.91
SF3B6-202ENST00000478050 LY6G6CO95867 125 aa3.11□□□□□ -1.91
SF3B6-202ENST00000478050 FAM236CP0DP71 79 aa3.11□□□□□ -1.91
SF3B6-202ENST00000478050 MT3P25713 68 aa3.11□□□□□ -1.91
SF3B6-202ENST00000478050 ST20-AS1Q8NBB2 130 aa3.11□□□□□ -1.91
SF3B6-202ENST00000478050 APLNQ9ULZ1 77 aa3.11□□□□□ -1.91
SF3B6-202ENST00000478050 H7BZZ5 65 aa3.1□□□□□ -1.91
SF3B6-202ENST00000478050 CDK2AP2O75956 126 aa3.1□□□□□ -1.91
SF3B6-202ENST00000478050 ATP5EP56381 51 aaPredicted RBP3.1□□□□□ -1.91
SF3B6-202ENST00000478050 SMIM29Q86T20 159 aa3.1□□□□□ -1.91
SF3B6-202ENST00000478050 STARD9Q9P2P6 4700 aa3.09□□□□□ -1.91
SF3B6-202ENST00000478050 IGLV8-61A0A075B6I0 122 aa3.09□□□□□ -1.91
SF3B6-202ENST00000478050 IGKV2-24A0A0C4DH68 120 aa3.09□□□□□ -1.91
SF3B6-202ENST00000478050 A0A1W2PNN7 141 aa3.09□□□□□ -1.91
SF3B6-202ENST00000478050 H0Y9J4 135 aa3.09□□□□□ -1.91
SF3B6-202ENST00000478050 Q8N9L7 120 aa3.09□□□□□ -1.91
SF3B6-202ENST00000478050 OCR1Q9BZK8 76 aa3.09□□□□□ -1.91
SF3B6-202ENST00000478050 SERP1Q9Y6X1 66 aa3.09□□□□□ -1.91
SF3B6-202ENST00000478050 NUPR2A6NF83 97 aa3.08□□□□□ -1.92
SF3B6-202ENST00000478050 SPRR1BP22528 89 aa3.08□□□□□ -1.92
SF3B6-202ENST00000478050 C9orf163Q8N9P6 203 aa3.08□□□□□ -1.92
SF3B6-202ENST00000478050 TMEM254Q8TBM7 123 aa3.08□□□□□ -1.92
SF3B6-202ENST00000478050 LINC00474Q9P2X8 69 aa3.08□□□□□ -1.92
SF3B6-202ENST00000478050 SNURFQ9Y675 71 aa3.08□□□□□ -1.92
SF3B6-202ENST00000478050 OBSCNQ5VST9 7968 aa3.07□□□□□ -1.92
SF3B6-202ENST00000478050 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.07□□□□□ -1.92
SF3B6-202ENST00000478050 NBDYA0A0U1RRE5 68 aa3.07□□□□□ -1.92
SF3B6-202ENST00000478050 UBE2AP49459 152 aa3.07□□□□□ -1.92
SF3B6-202ENST00000478050 DSCR10P59022 87 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms