RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 LINC01549A6NIU2 74 aa3.58□□□□□ -1.84
PTPRN-214ENST00000477819 HRES1P13985 223 aa3.58□□□□□ -1.84
PTPRN-214ENST00000477819 COX19Q49B96 90 aa3.58□□□□□ -1.84
PTPRN-214ENST00000477819 FA2HQ7L5A8 372 aa3.58□□□□□ -1.84
PTPRN-214ENST00000477819 BAGE3Q86Y29 109 aa3.58□□□□□ -1.84
PTPRN-214ENST00000477819 A0A096LNJ9 63 aa3.57□□□□□ -1.84
PTPRN-214ENST00000477819 A6NN06 94 aa3.57□□□□□ -1.84
PTPRN-214ENST00000477819 A8MUU9 505 aa3.57□□□□□ -1.84
PTPRN-214ENST00000477819 NDUFA5Q16718 116 aa3.57□□□□□ -1.84
PTPRN-214ENST00000477819 IGFL1Q6UW32 110 aa3.57□□□□□ -1.84
PTPRN-214ENST00000477819 Q6ZVH6 145 aa3.57□□□□□ -1.84
PTPRN-214ENST00000477819 RBM12B-AS1Q9P1G2 102 aa3.57□□□□□ -1.84
PTPRN-214ENST00000477819 DHRS4-AS1Q9P1J3 65 aa3.57□□□□□ -1.84
PTPRN-214ENST00000477819 TEX49A0A1B0GTD5 131 aa3.56□□□□□ -1.84
PTPRN-214ENST00000477819 HINT1P49773 126 aaPredicted RBP3.56□□□□□ -1.84
PTPRN-214ENST00000477819 KRTAP2-1Q9BYU5 128 aa3.56□□□□□ -1.84
PTPRN-214ENST00000477819 PMCHL1Q16048 86 aa3.55□□□□□ -1.84
PTPRN-214ENST00000477819 KRTAP5-1Q6L8H4 278 aa3.55□□□□□ -1.84
PTPRN-214ENST00000477819 LINC00587B1AMM8 73 aa3.54□□□□□ -1.84
PTPRN-214ENST00000477819 HBDP02042 147 aa3.54□□□□□ -1.84
PTPRN-214ENST00000477819 NPC2P61916 151 aa3.54□□□□□ -1.84
PTPRN-214ENST00000477819 SOSTDC1Q6X4U4 206 aa3.54□□□□□ -1.84
PTPRN-214ENST00000477819 TCTE3Q8IZS6 198 aa3.54□□□□□ -1.84
PTPRN-214ENST00000477819 RPS10P5Q9NQ39 176 aa3.54□□□□□ -1.84
PTPRN-214ENST00000477819 SMCO4Q9NRQ5 59 aa3.54□□□□□ -1.84
PTPRN-214ENST00000477819 MYMXA0A1B0GTQ4 84 aa3.53□□□□□ -1.84
PTPRN-214ENST00000477819 LOC105371267A0A1B0GV96 52 aa3.53□□□□□ -1.84
PTPRN-214ENST00000477819 NDUFC2O95298 119 aa3.53□□□□□ -1.84
PTPRN-214ENST00000477819 TSPEAR-AS2P59090 65 aa3.53□□□□□ -1.84
PTPRN-214ENST00000477819 PEA15Q15121 130 aa3.53□□□□□ -1.84
PTPRN-214ENST00000477819 A8MWP4 228 aa3.52□□□□□ -1.85
PTPRN-214ENST00000477819 COX7BP24311 80 aa3.52□□□□□ -1.85
PTPRN-214ENST00000477819 NOTCH2NLQ7Z3S9 236 aa3.52□□□□□ -1.85
PTPRN-214ENST00000477819 MIEN1Q9BRT3 115 aa3.52□□□□□ -1.85
PTPRN-214ENST00000477819 MT-ND4LP03901 98 aa3.51□□□□□ -1.85
PTPRN-214ENST00000477819 SPRR2EP22531 72 aa3.51□□□□□ -1.85
PTPRN-214ENST00000477819 SPRR2BP35325 72 aa3.51□□□□□ -1.85
PTPRN-214ENST00000477819 SPRR2AP35326 72 aa3.51□□□□□ -1.85
PTPRN-214ENST00000477819 ELOF1P60002 83 aaKnown RBP3.51□□□□□ -1.85
PTPRN-214ENST00000477819 COMMD7Q86VX2 200 aa3.51□□□□□ -1.85
PTPRN-214ENST00000477819 OR13C6PQ8NH95 151 aa3.51□□□□□ -1.85
PTPRN-214ENST00000477819 ADAMTSL4-AS1Q5T5F5 129 aa3.5□□□□□ -1.85
PTPRN-214ENST00000477819 IGLV5-48A0A075B6I7 105 aa3.49□□□□□ -1.85
PTPRN-214ENST00000477819 TRBV7-7A0A0K0K1E9 115 aa3.49□□□□□ -1.85
PTPRN-214ENST00000477819 RHEBQ15382 184 aa3.49□□□□□ -1.85
PTPRN-214ENST00000477819 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
PTPRN-214ENST00000477819 DSCR10P59022 87 aa3.48□□□□□ -1.85
PTPRN-214ENST00000477819 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
PTPRN-214ENST00000477819 LINC00614P0C842 121 aa3.47□□□□□ -1.85
PTPRN-214ENST00000477819 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
PTPRN-214ENST00000477819 KRTAP9-6A8MVA2 160 aa3.46□□□□□ -1.86
PTPRN-214ENST00000477819 LST1O00453 97 aa3.46□□□□□ -1.86
PTPRN-214ENST00000477819 LEPROTO15243 131 aa3.46□□□□□ -1.86
PTPRN-214ENST00000477819 MT1BP07438 61 aa3.46□□□□□ -1.86
PTPRN-214ENST00000477819 FABP9Q0Z7S8 132 aa3.46□□□□□ -1.86
PTPRN-214ENST00000477819 TRAV12-1A0A0B4J245 112 aa3.45□□□□□ -1.86
PTPRN-214ENST00000477819 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
PTPRN-214ENST00000477819 J3QQQ9 107 aa3.44□□□□□ -1.86
PTPRN-214ENST00000477819 IFITM2Q01629 132 aa3.44□□□□□ -1.86
PTPRN-214ENST00000477819 C18orf32Q8TCD1 76 aa3.44□□□□□ -1.86
PTPRN-214ENST00000477819 A0A1B0GWB2 263 aa3.43□□□□□ -1.86
PTPRN-214ENST00000477819 E9PLD3 99 aa3.43□□□□□ -1.86
PTPRN-214ENST00000477819 F8WEM9 126 aa3.43□□□□□ -1.86
PTPRN-214ENST00000477819 CLEC2BQ92478 149 aa3.43□□□□□ -1.86
PTPRN-214ENST00000477819 IFI27L1Q96BM0 104 aa3.43□□□□□ -1.86
PTPRN-214ENST00000477819 SPANXDQ9BXN6 97 aa3.43□□□□□ -1.86
PTPRN-214ENST00000477819 SPANXCQ9NY87 97 aa3.43□□□□□ -1.86
PTPRN-214ENST00000477819 A0A0J9YXY3 114 aa3.42□□□□□ -1.86
PTPRN-214ENST00000477819 LINC00308Q8TCZ7 52 aa3.42□□□□□ -1.86
PTPRN-214ENST00000477819 SEC11CQ9BY50 192 aa3.42□□□□□ -1.86
PTPRN-214ENST00000477819 FAM240AA0A1B0GVK7 77 aa3.41□□□□□ -1.86
PTPRN-214ENST00000477819 Q6JHZ5 121 aa3.41□□□□□ -1.86
PTPRN-214ENST00000477819 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
PTPRN-214ENST00000477819 TRBV7-6A0A0J9YX20 115 aa3.4□□□□□ -1.87
PTPRN-214ENST00000477819 NMUP48645 174 aa3.4□□□□□ -1.87
PTPRN-214ENST00000477819 A0A1B0GV72 72 aa3.39□□□□□ -1.87
PTPRN-214ENST00000477819 A6NDN8 102 aa3.39□□□□□ -1.87
PTPRN-214ENST00000477819 SPRR2DP22532 72 aa3.39□□□□□ -1.87
PTPRN-214ENST00000477819 OCIAD2Q56VL3 154 aa3.39□□□□□ -1.87
PTPRN-214ENST00000477819 Q5VV11 94 aa3.39□□□□□ -1.87
PTPRN-214ENST00000477819 LITAFQ99732 161 aa3.39□□□□□ -1.87
PTPRN-214ENST00000477819 C4orf26Q17RF5 130 aa3.38□□□□□ -1.87
PTPRN-214ENST00000477819 KRTAP5-4Q6L8H1 288 aa3.38□□□□□ -1.87
PTPRN-214ENST00000477819 A0A1W2PNM2 257 aa3.37□□□□□ -1.87
PTPRN-214ENST00000477819 COLCA2A8K830 154 aa3.37□□□□□ -1.87
PTPRN-214ENST00000477819 H3BUT2 72 aa3.37□□□□□ -1.87
PTPRN-214ENST00000477819 SPINK7P58062 85 aa3.37□□□□□ -1.87
PTPRN-214ENST00000477819 LINC00313P59037 77 aa3.37□□□□□ -1.87
PTPRN-214ENST00000477819 PMCHL2Q9BQD1 86 aa3.37□□□□□ -1.87
PTPRN-214ENST00000477819 TRAV13-2A0A0B4J235 113 aa3.36□□□□□ -1.87
PTPRN-214ENST00000477819 SERF1AO75920 110 aa3.36□□□□□ -1.87
PTPRN-214ENST00000477819 SNAPINO95295 136 aa3.36□□□□□ -1.87
PTPRN-214ENST00000477819 S100PP25815 95 aa3.36□□□□□ -1.87
PTPRN-214ENST00000477819 HERVK_113P61574 105 aa3.35□□□□□ -1.87
PTPRN-214ENST00000477819 KRTAP19-8Q3LI54 63 aa3.35□□□□□ -1.87
PTPRN-214ENST00000477819 HIST1H4GQ99525 98 aa3.35□□□□□ -1.87
PTPRN-214ENST00000477819 SIGMAR1Q99720 223 aa3.35□□□□□ -1.87
PTPRN-214ENST00000477819 TRAPPC1Q9Y5R8 145 aa3.35□□□□□ -1.87
PTPRN-214ENST00000477819 NDUFV3P56181 108 aaKnown RBP3.34□□□□□ -1.87
PTPRN-214ENST00000477819 Q6ZQY7 126 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms