RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 MP68P56378 58 aa6.24□□□□□ -1.41
CMC1-209ENST00000477739 IGLV1-50A0A075B6I6 118 aa6.24□□□□□ -1.41
CMC1-209ENST00000477739 KCNQ1DNQ9H478 68 aa6.23□□□□□ -1.41
CMC1-209ENST00000477739 F8WDY8 70 aa6.23□□□□□ -1.41
CMC1-209ENST00000477739 IGFL1Q6UW32 110 aa6.23□□□□□ -1.41
CMC1-209ENST00000477739 HCG22E2RYF7 251 aa6.22□□□□□ -1.41
CMC1-209ENST00000477739 KRTAP1-5Q9BYS1 174 aa6.21□□□□□ -1.42
CMC1-209ENST00000477739 OCR1Q9BZK8 76 aa6.21□□□□□ -1.42
CMC1-209ENST00000477739 DSCR10P59022 87 aa6.21□□□□□ -1.42
CMC1-209ENST00000477739 C1orf64Q8NEQ6 169 aa6.21□□□□□ -1.42
CMC1-209ENST00000477739 NDUFC1O43677 76 aa6.2□□□□□ -1.42
CMC1-209ENST00000477739 IGHV6-1A0A0B4J1U7 121 aa6.2□□□□□ -1.42
CMC1-209ENST00000477739 CASC2Q6XLA1 102 aa6.2□□□□□ -1.42
CMC1-209ENST00000477739 MDFIQ99750 246 aa6.19□□□□□ -1.42
CMC1-209ENST00000477739 A8MUN3 132 aa6.19□□□□□ -1.42
CMC1-209ENST00000477739 KRTAP7-1Q8IUC3 87 aa6.19□□□□□ -1.42
CMC1-209ENST00000477739 H0Y9P7 68 aa6.18□□□□□ -1.42
CMC1-209ENST00000477739 CDK2AP2O75956 126 aa6.18□□□□□ -1.42
CMC1-209ENST00000477739 CHKB-CPT1BH3BT56 60 aa6.17□□□□□ -1.42
CMC1-209ENST00000477739 PRO0628Q9UI54 55 aa6.16□□□□□ -1.42
CMC1-209ENST00000477739 TLX1NBP0CAT3 122 aa6.16□□□□□ -1.42
CMC1-209ENST00000477739 C1orf195Q5TG92 126 aa6.16□□□□□ -1.42
CMC1-209ENST00000477739 KRTAP11-1Q8IUC1 163 aa6.16□□□□□ -1.42
CMC1-209ENST00000477739 ANK2Q01484 3957 aa6.16□□□□□ -1.42
CMC1-209ENST00000477739 A8MU10 97 aa6.15□□□□□ -1.42
CMC1-209ENST00000477739 PRR15LQ9BU68 103 aa6.15□□□□□ -1.42
CMC1-209ENST00000477739 B9D2Q9BPU9 175 aa6.14□□□□□ -1.43
CMC1-209ENST00000477739 FBN3Q75N90 2809 aa6.14□□□□□ -1.43
CMC1-209ENST00000477739 IGLV5-48A0A075B6I7 105 aa6.13□□□□□ -1.43
CMC1-209ENST00000477739 NDUFB1O75438 58 aa6.13□□□□□ -1.43
CMC1-209ENST00000477739 PANO1I0J062 215 aa6.13□□□□□ -1.43
CMC1-209ENST00000477739 CIRBP-AS1Q8TBR5 109 aa6.12□□□□□ -1.43
CMC1-209ENST00000477739 MOBPQ13875 183 aa6.12□□□□□ -1.43
CMC1-209ENST00000477739 PLA2G2DQ9UNK4 145 aa6.12□□□□□ -1.43
CMC1-209ENST00000477739 SPAG11AQ6PDA7 123 aa6.12□□□□□ -1.43
CMC1-209ENST00000477739 A6NED7 52 aa6.11□□□□□ -1.43
CMC1-209ENST00000477739 C14orf177Q52M58 125 aa6.11□□□□□ -1.43
CMC1-209ENST00000477739 C16orf90A8MZG2 172 aa6.1□□□□□ -1.43
CMC1-209ENST00000477739 DMBT1Q9UGM3 2413 aaPredicted RBP6.1□□□□□ -1.43
CMC1-209ENST00000477739 LYSTQ99698 3801 aa6.09□□□□□ -1.43
CMC1-209ENST00000477739 LY6G6CO95867 125 aa6.09□□□□□ -1.43
CMC1-209ENST00000477739 PMAIP1Q13794 54 aa6.09□□□□□ -1.43
CMC1-209ENST00000477739 IGLV5-37A0A075B6J1 123 aa6.09□□□□□ -1.44
CMC1-209ENST00000477739 TRAV22A0A0B4J277 110 aa6.09□□□□□ -1.44
CMC1-209ENST00000477739 ATP5EP56381 51 aaPredicted RBP6.08□□□□□ -1.44
CMC1-209ENST00000477739 SPRR1AP35321 89 aa6.08□□□□□ -1.44
CMC1-209ENST00000477739 KRTAP4-16G5E9R7 235 aaPredicted RBP6.07□□□□□ -1.44
CMC1-209ENST00000477739 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
CMC1-209ENST00000477739 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
CMC1-209ENST00000477739 APLNQ9ULZ1 77 aa6.07□□□□□ -1.44
CMC1-209ENST00000477739 DNAH10Q8IVF4 4471 aa6.06□□□□□ -1.44
CMC1-209ENST00000477739 BCE1O60756 84 aa6.06□□□□□ -1.44
CMC1-209ENST00000477739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.06□□□□□ -1.44
CMC1-209ENST00000477739 V9GYY9 64 aa6.06□□□□□ -1.44
CMC1-209ENST00000477739 NBDYA0A0U1RRE5 68 aa6.04□□□□□ -1.44
CMC1-209ENST00000477739 CNBPP62633 177 aaKnown RBP6.04□□□□□ -1.44
CMC1-209ENST00000477739 NUPR2A6NF83 97 aa6.03□□□□□ -1.44
CMC1-209ENST00000477739 TNP2Q05952 138 aa6.03□□□□□ -1.44
CMC1-209ENST00000477739 SPRR4Q96PI1 79 aa6.03□□□□□ -1.44
CMC1-209ENST00000477739 C9orf163Q8N9P6 203 aa6.01□□□□□ -1.45
CMC1-209ENST00000477739 A0A1B0GW54 56 aa6□□□□□ -1.45
CMC1-209ENST00000477739 IGLV8-61A0A075B6I0 122 aa6□□□□□ -1.45
CMC1-209ENST00000477739 A8MWP4 228 aa6□□□□□ -1.45
CMC1-209ENST00000477739 SPINK1P00995 79 aa6□□□□□ -1.45
CMC1-209ENST00000477739 COA5Q86WW8 74 aa5.99□□□□□ -1.45
CMC1-209ENST00000477739 A0A087X002 238 aa5.99□□□□□ -1.45
CMC1-209ENST00000477739 NOTCH2NLQ7Z3S9 236 aa5.99□□□□□ -1.45
CMC1-209ENST00000477739 PRR26Q8N8Z3 221 aa5.98□□□□□ -1.45
CMC1-209ENST00000477739 PSORS1C2Q9UIG4 136 aa5.97□□□□□ -1.45
CMC1-209ENST00000477739 MEGF8Q7Z7M0 2845 aa5.96□□□□□ -1.45
CMC1-209ENST00000477739 FLG2Q5D862 2391 aaPredicted RBP5.96□□□□□ -1.45
CMC1-209ENST00000477739 IGLV5-52A0A0A0MRZ9 124 aa5.96□□□□□ -1.45
CMC1-209ENST00000477739 RTL8CO15255 209 aa5.95□□□□□ -1.46
CMC1-209ENST00000477739 HUWE1Q7Z6Z7 4374 aaKnown RBP5.94□□□□□ -1.46
CMC1-209ENST00000477739 IGKV2D-30A0A075B6S6 120 aa5.94□□□□□ -1.46
CMC1-209ENST00000477739 IGKV2-30P06310 120 aa5.94□□□□□ -1.46
CMC1-209ENST00000477739 SPACA4Q8TDM5 124 aa5.93□□□□□ -1.46
CMC1-209ENST00000477739 C8orf17Q9NRJ1 99 aa5.92□□□□□ -1.46
CMC1-209ENST00000477739 A0A087WTM6 91 aa5.92□□□□□ -1.46
CMC1-209ENST00000477739 SEC61GP60059 68 aa5.92□□□□□ -1.46
CMC1-209ENST00000477739 CD164Q04900 197 aa5.92□□□□□ -1.46
CMC1-209ENST00000477739 MMP24-AS1A0A0U1RRL7 71 aa5.92□□□□□ -1.46
CMC1-209ENST00000477739 LINC00472Q9H8W2 130 aa5.91□□□□□ -1.46
CMC1-209ENST00000477739 ZCCHC13Q8WW36 166 aaKnown RBP5.9□□□□□ -1.46
CMC1-209ENST00000477739 Q5VV11 94 aa5.9□□□□□ -1.47
CMC1-209ENST00000477739 Q8N9P0 234 aaPredicted RBP5.89□□□□□ -1.47
CMC1-209ENST00000477739 C1orf134Q5TEV5 83 aa5.88□□□□□ -1.47
CMC1-209ENST00000477739 CMYA5Q8N3K9 4069 aa5.88□□□□□ -1.47
CMC1-209ENST00000477739 Q6ZRN7 208 aaPredicted RBP5.88□□□□□ -1.47
CMC1-209ENST00000477739 KRTAP29-1A8MX34 341 aaPredicted RBP5.87□□□□□ -1.47
CMC1-209ENST00000477739 MRPL34Q9BQ48 92 aaKnown RBP5.87□□□□□ -1.47
CMC1-209ENST00000477739 ZNF706Q9Y5V0 76 aaPredicted RBP5.87□□□□□ -1.47
CMC1-209ENST00000477739 A0A1B0GVX0 72 aa5.86□□□□□ -1.47
CMC1-209ENST00000477739 Q1T7F1 81 aa5.86□□□□□ -1.47
CMC1-209ENST00000477739 SPRR1BP22528 89 aa5.85□□□□□ -1.47
CMC1-209ENST00000477739 SPINK7P58062 85 aa5.85□□□□□ -1.47
CMC1-209ENST00000477739 LIMD2Q9BT23 127 aa5.84□□□□□ -1.47
CMC1-209ENST00000477739 Q5W150 140 aa5.83□□□□□ -1.48
CMC1-209ENST00000477739 ZNF861PO60384 105 aa5.82□□□□□ -1.48
CMC1-209ENST00000477739 SMR3BP02814 79 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms