RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 HCG22E2RYF7 251 aa11.36□□□□□ -0.59
CCM2-209ENST00000477605 KRTAP1-5Q9BYS1 174 aa11.36□□□□□ -0.59
CCM2-209ENST00000477605 PKIGQ9Y2B9 76 aa11.36□□□□□ -0.59
CCM2-209ENST00000477605 FP248Q71RG6 208 aaPredicted RBP11.36□□□□□ -0.59
CCM2-209ENST00000477605 IGKV2-24A0A0C4DH68 120 aa11.35□□□□□ -0.59
CCM2-209ENST00000477605 PRLHP81277 87 aa11.35□□□□□ -0.59
CCM2-209ENST00000477605 B9D2Q9BPU9 175 aa11.35□□□□□ -0.59
CCM2-209ENST00000477605 COL7A1Q02388 2944 aa11.35□□□□□ -0.59
CCM2-209ENST00000477605 SPRR1BP22528 89 aa11.34□□□□□ -0.59
CCM2-209ENST00000477605 ZCCHC13Q8WW36 166 aaKnown RBP11.33□□□□□ -0.6
CCM2-209ENST00000477605 UBE2AP49459 152 aa11.32□□□□□ -0.6
CCM2-209ENST00000477605 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
CCM2-209ENST00000477605 APLNQ9ULZ1 77 aa11.31□□□□□ -0.6
CCM2-209ENST00000477605 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.29□□□□□ -0.6
CCM2-209ENST00000477605 HUWE1Q7Z6Z7 4374 aaKnown RBP11.29□□□□□ -0.6
CCM2-209ENST00000477605 A0A087WSZ3 146 aa11.29□□□□□ -0.6
CCM2-209ENST00000477605 C9orf163Q8N9P6 203 aa11.26□□□□□ -0.61
CCM2-209ENST00000477605 LINC00474Q9P2X8 69 aa11.26□□□□□ -0.61
CCM2-209ENST00000477605 A0A0G2JQZ4 141 aa11.25□□□□□ -0.61
CCM2-209ENST00000477605 PHF5AQ7RTV0 110 aaKnown RBP11.25□□□□□ -0.61
CCM2-209ENST00000477605 NDUFB1O75438 58 aa11.23□□□□□ -0.61
CCM2-209ENST00000477605 KRTAP11-1Q8IUC1 163 aa11.21□□□□□ -0.61
CCM2-209ENST00000477605 STAB2Q8WWQ8 2551 aa11.21□□□□□ -0.62
CCM2-209ENST00000477605 hDV103S1A0JD37 113 aa11.2□□□□□ -0.62
CCM2-209ENST00000477605 KRTAP29-1A8MX34 341 aaPredicted RBP11.2□□□□□ -0.62
CCM2-209ENST00000477605 CHTF8P0CG12 524 aa11.2□□□□□ -0.62
CCM2-209ENST00000477605 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
CCM2-209ENST00000477605 MP68P56378 58 aa11.2□□□□□ -0.62
CCM2-209ENST00000477605 DEFB116Q30KQ4 102 aa11.2□□□□□ -0.62
CCM2-209ENST00000477605 FAM229BQ4G0N7 80 aa11.2□□□□□ -0.62
CCM2-209ENST00000477605 PRR15Q8IV56 129 aa11.19□□□□□ -0.62
CCM2-209ENST00000477605 WWC2-AS2Q96NR7 200 aa11.19□□□□□ -0.62
CCM2-209ENST00000477605 CYP4F30PQ9H0H9 118 aa11.19□□□□□ -0.62
CCM2-209ENST00000477605 PRO0628Q9UI54 55 aa11.19□□□□□ -0.62
CCM2-209ENST00000477605 LINC00336Q6ZUF6 198 aa11.18□□□□□ -0.62
CCM2-209ENST00000477605 H3BPC8 53 aa11.18□□□□□ -0.62
CCM2-209ENST00000477605 A8MWP4 228 aa11.17□□□□□ -0.62
CCM2-209ENST00000477605 WFDC13Q8IUB5 93 aa11.17□□□□□ -0.62
CCM2-209ENST00000477605 LINC00472Q9H8W2 130 aa11.17□□□□□ -0.62
CCM2-209ENST00000477605 KMT2CQ8NEZ4 4911 aaKnown RBP11.16□□□□□ -0.62
CCM2-209ENST00000477605 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.62
CCM2-209ENST00000477605 CASC2Q6XLA1 102 aa11.15□□□□□ -0.63
CCM2-209ENST00000477605 KRTAP13-1Q8IUC0 172 aa11.15□□□□□ -0.63
CCM2-209ENST00000477605 RPL37AP61513 92 aaKnown RBP11.13□□□□□ -0.63
CCM2-209ENST00000477605 C1orf64Q8NEQ6 169 aa11.13□□□□□ -0.63
CCM2-209ENST00000477605 DNAH7Q8WXX0 4024 aa11.12□□□□□ -0.63
CCM2-209ENST00000477605 TRAV22A0A0B4J277 110 aa11.11□□□□□ -0.63
CCM2-209ENST00000477605 Q6ZRN7 208 aaPredicted RBP11.11□□□□□ -0.63
CCM2-209ENST00000477605 MPLKIPQ8TAP9 179 aa11.11□□□□□ -0.63
CCM2-209ENST00000477605 NUPR2A6NF83 97 aa11.1□□□□□ -0.63
CCM2-209ENST00000477605 Q1T7F1 81 aa11.07□□□□□ -0.64
CCM2-209ENST00000477605 SPANXA2-OT1Q8N9U9 137 aa11.07□□□□□ -0.64
CCM2-209ENST00000477605 LINC00208Q96KT6 92 aa11.07□□□□□ -0.64
CCM2-209ENST00000477605 H0Y9P7 68 aa11.06□□□□□ -0.64
CCM2-209ENST00000477605 SPACA4Q8TDM5 124 aa11.05□□□□□ -0.64
CCM2-209ENST00000477605 RYR3Q15413 4870 aa11.04□□□□□ -0.64
CCM2-209ENST00000477605 PANO1I0J062 215 aa11.04□□□□□ -0.64
CCM2-209ENST00000477605 LINC00483Q53H64 154 aa11.04□□□□□ -0.64
CCM2-209ENST00000477605 STARD9Q9P2P6 4700 aa11.03□□□□□ -0.64
CCM2-209ENST00000477605 DYNC2H1Q8NCM8 4307 aaKnown RBP11.02□□□□□ -0.65
CCM2-209ENST00000477605 MMP24-AS1A0A0U1RRL7 71 aa11.01□□□□□ -0.65
CCM2-209ENST00000477605 ZNF706Q9Y5V0 76 aaPredicted RBP11.01□□□□□ -0.65
CCM2-209ENST00000477605 CSMD3Q7Z407 3707 aa11□□□□□ -0.65
CCM2-209ENST00000477605 DNAH10Q8IVF4 4471 aa10.98□□□□□ -0.65
CCM2-209ENST00000477605 BRK1Q8WUW1 75 aa10.98□□□□□ -0.65
CCM2-209ENST00000477605 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.98□□□□□ -0.65
CCM2-209ENST00000477605 ASB16-AS1Q495Z4 193 aa10.97□□□□□ -0.65
CCM2-209ENST00000477605 TP53AIP1Q9HCN2 124 aa10.97□□□□□ -0.65
CCM2-209ENST00000477605 V9GYY9 64 aa10.97□□□□□ -0.65
CCM2-209ENST00000477605 MOBPQ13875 183 aa10.96□□□□□ -0.65
CCM2-209ENST00000477605 Q96NJ1 140 aa10.96□□□□□ -0.65
CCM2-209ENST00000477605 SACSQ9NZJ4 4579 aa10.96□□□□□ -0.66
CCM2-209ENST00000477605 PRR4Q16378 134 aa10.96□□□□□ -0.66
CCM2-209ENST00000477605 A0A087WTM6 91 aa10.95□□□□□ -0.66
CCM2-209ENST00000477605 IGLV9-49A0A0B4J1Y8 123 aa10.94□□□□□ -0.66
CCM2-209ENST00000477605 RYR2Q92736 4967 aa10.92□□□□□ -0.66
CCM2-209ENST00000477605 TENM2Q9NT68 2774 aa10.9□□□□□ -0.66
CCM2-209ENST00000477605 IGLV5-52A0A0A0MRZ9 124 aa10.9□□□□□ -0.66
CCM2-209ENST00000477605 C8orf17Q9NRJ1 99 aa10.89□□□□□ -0.67
CCM2-209ENST00000477605 LYSTQ99698 3801 aa10.89□□□□□ -0.67
CCM2-209ENST00000477605 PLAC8Q9NZF1 115 aa10.89□□□□□ -0.67
CCM2-209ENST00000477605 PLECQ15149 4684 aaKnown RBP10.89□□□□□ -0.67
CCM2-209ENST00000477605 RTL8CO15255 209 aa10.88□□□□□ -0.67
CCM2-209ENST00000477605 ZNF861PO60384 105 aa10.87□□□□□ -0.67
CCM2-209ENST00000477605 PSORS1C2Q9UIG4 136 aa10.87□□□□□ -0.67
CCM2-209ENST00000477605 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
CCM2-209ENST00000477605 A0A1B0GVX0 72 aa10.86□□□□□ -0.67
CCM2-209ENST00000477605 Q6ZR54 194 aa10.86□□□□□ -0.67
CCM2-209ENST00000477605 C1orf195Q5TG92 126 aa10.85□□□□□ -0.67
CCM2-209ENST00000477605 CDK2AP2O75956 126 aa10.85□□□□□ -0.67
CCM2-209ENST00000477605 HYDINQ4G0P3 5121 aa10.82□□□□□ -0.68
CCM2-209ENST00000477605 LIMD2Q9BT23 127 aa10.81□□□□□ -0.68
CCM2-209ENST00000477605 PSPHP1O15172 72 aa10.8□□□□□ -0.68
CCM2-209ENST00000477605 IGHV6-1A0A0B4J1U7 121 aa10.79□□□□□ -0.68
CCM2-209ENST00000477605 MRPL34Q9BQ48 92 aaKnown RBP10.79□□□□□ -0.68
CCM2-209ENST00000477605 ALMS1Q8TCU4 4167 aa10.79□□□□□ -0.68
CCM2-209ENST00000477605 Q8N9P0 234 aaPredicted RBP10.77□□□□□ -0.69
CCM2-209ENST00000477605 SRRM2Q9UQ35 2752 aaKnown RBP10.77□□□□□ -0.69
CCM2-209ENST00000477605 A8MUN3 132 aa10.74□□□□□ -0.69
CCM2-209ENST00000477605 COA5Q86WW8 74 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms