RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 HIGD2AQ9BW72 106 aa5.27□□□□□ -1.57
PTPRD-209ENST00000477552 DSCR10P59022 87 aa5.26□□□□□ -1.57
PTPRD-209ENST00000477552 SNURFQ9Y675 71 aa5.26□□□□□ -1.57
PTPRD-209ENST00000477552 A0A1W2PNN7 141 aa5.25□□□□□ -1.57
PTPRD-209ENST00000477552 LRCOL1A6NCL2 159 aa5.25□□□□□ -1.57
PTPRD-209ENST00000477552 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
PTPRD-209ENST00000477552 Q8N9L7 120 aa5.24□□□□□ -1.57
PTPRD-209ENST00000477552 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
PTPRD-209ENST00000477552 KRTAP1-5Q9BYS1 174 aa5.24□□□□□ -1.57
PTPRD-209ENST00000477552 hDV103S1A0JD37 113 aa5.23□□□□□ -1.57
PTPRD-209ENST00000477552 A8MWP4 228 aa5.23□□□□□ -1.57
PTPRD-209ENST00000477552 PRB2P02812 416 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-209ENST00000477552 PRLHP81277 87 aa5.23□□□□□ -1.57
PTPRD-209ENST00000477552 A0A087WSZ3 146 aa5.22□□□□□ -1.57
PTPRD-209ENST00000477552 K7EQZ3 153 aa5.22□□□□□ -1.57
PTPRD-209ENST00000477552 MDFIQ99750 246 aa5.22□□□□□ -1.57
PTPRD-209ENST00000477552 ANK2Q01484 3957 aa5.21□□□□□ -1.58
PTPRD-209ENST00000477552 Q6ZRN7 208 aaPredicted RBP5.21□□□□□ -1.58
PTPRD-209ENST00000477552 KRTAP13-1Q8IUC0 172 aa5.21□□□□□ -1.58
PTPRD-209ENST00000477552 PRR15Q8IV56 129 aa5.21□□□□□ -1.58
PTPRD-209ENST00000477552 CYP4F30PQ9H0H9 118 aa5.21□□□□□ -1.58
PTPRD-209ENST00000477552 TP53AIP1Q9HCN2 124 aa5.21□□□□□ -1.58
PTPRD-209ENST00000477552 LINC00483Q53H64 154 aa5.2□□□□□ -1.58
PTPRD-209ENST00000477552 PHF5AQ7RTV0 110 aaKnown RBP5.2□□□□□ -1.58
PTPRD-209ENST00000477552 SPANXA2-OT1Q8N9U9 137 aa5.2□□□□□ -1.58
PTPRD-209ENST00000477552 SPACA4Q8TDM5 124 aa5.2□□□□□ -1.58
PTPRD-209ENST00000477552 ZCCHC13Q8WW36 166 aaKnown RBP5.2□□□□□ -1.58
PTPRD-209ENST00000477552 FAM30AQ9NZY2 134 aa5.2□□□□□ -1.58
PTPRD-209ENST00000477552 STAB2Q8WWQ8 2551 aa5.2□□□□□ -1.58
PTPRD-209ENST00000477552 MGAM2Q2M2H8 2515 aa5.19□□□□□ -1.58
PTPRD-209ENST00000477552 Q5XG85 94 aa5.19□□□□□ -1.58
PTPRD-209ENST00000477552 CASC2Q6XLA1 102 aa5.19□□□□□ -1.58
PTPRD-209ENST00000477552 LINC00472Q9H8W2 130 aa5.19□□□□□ -1.58
PTPRD-209ENST00000477552 V9GYY9 64 aa5.19□□□□□ -1.58
PTPRD-209ENST00000477552 KRTAP29-1A8MX34 341 aaPredicted RBP5.18□□□□□ -1.58
PTPRD-209ENST00000477552 MOBPQ13875 183 aa5.18□□□□□ -1.58
PTPRD-209ENST00000477552 A0A087WTM6 91 aa5.17□□□□□ -1.58
PTPRD-209ENST00000477552 OXTP01178 125 aa5.17□□□□□ -1.58
PTPRD-209ENST00000477552 COL7A1Q02388 2944 aa5.17□□□□□ -1.58
PTPRD-209ENST00000477552 PLAC8Q9NZF1 115 aa5.16□□□□□ -1.58
PTPRD-209ENST00000477552 CDK2AP2O75956 126 aa5.15□□□□□ -1.59
PTPRD-209ENST00000477552 CHTF8P0CG12 524 aa5.15□□□□□ -1.59
PTPRD-209ENST00000477552 DNAH1Q9P2D7 4330 aa5.15□□□□□ -1.59
PTPRD-209ENST00000477552 DYNC2H1Q8NCM8 4307 aaKnown RBP5.14□□□□□ -1.59
PTPRD-209ENST00000477552 IGLV5-52A0A0A0MRZ9 124 aa5.14□□□□□ -1.59
PTPRD-209ENST00000477552 ZNF861PO60384 105 aa5.14□□□□□ -1.59
PTPRD-209ENST00000477552 CD164Q04900 197 aa5.14□□□□□ -1.59
PTPRD-209ENST00000477552 TRAV22A0A0B4J277 110 aa5.13□□□□□ -1.59
PTPRD-209ENST00000477552 RTL8CO15255 209 aa5.13□□□□□ -1.59
PTPRD-209ENST00000477552 Q6ZR54 194 aa5.13□□□□□ -1.59
PTPRD-209ENST00000477552 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
PTPRD-209ENST00000477552 HUWE1Q7Z6Z7 4374 aaKnown RBP5.13□□□□□ -1.59
PTPRD-209ENST00000477552 H0Y9P7 68 aa5.12□□□□□ -1.59
PTPRD-209ENST00000477552 C4orf26Q17RF5 130 aa5.12□□□□□ -1.59
PTPRD-209ENST00000477552 Q1T7F1 81 aa5.12□□□□□ -1.59
PTPRD-209ENST00000477552 C1orf134Q5TEV5 83 aa5.12□□□□□ -1.59
PTPRD-209ENST00000477552 C1orf195Q5TG92 126 aa5.12□□□□□ -1.59
PTPRD-209ENST00000477552 WFDC13Q8IUB5 93 aa5.12□□□□□ -1.59
PTPRD-209ENST00000477552 ASB16-AS1Q495Z4 193 aa5.11□□□□□ -1.59
PTPRD-209ENST00000477552 HRCT1Q6UXD1 115 aa5.11□□□□□ -1.59
PTPRD-209ENST00000477552 FP248Q71RG6 208 aaPredicted RBP5.11□□□□□ -1.59
PTPRD-209ENST00000477552 SSBP3-AS1Q7Z2R9 100 aa5.11□□□□□ -1.59
PTPRD-209ENST00000477552 LCE2BO14633 110 aa5.1□□□□□ -1.59
PTPRD-209ENST00000477552 KRTAP11-1Q8IUC1 163 aa5.1□□□□□ -1.59
PTPRD-209ENST00000477552 LINC00208Q96KT6 92 aa5.1□□□□□ -1.59
PTPRD-209ENST00000477552 MMP24-AS1A0A0U1RRL7 71 aa5.09□□□□□ -1.59
PTPRD-209ENST00000477552 A0A1B0GVX0 72 aa5.09□□□□□ -1.59
PTPRD-209ENST00000477552 WWC2-AS2Q96NR7 200 aa5.09□□□□□ -1.59
PTPRD-209ENST00000477552 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.09□□□□□ -1.59
PTPRD-209ENST00000477552 C1orf64Q8NEQ6 169 aa5.08□□□□□ -1.6
PTPRD-209ENST00000477552 PSORS1C2Q9UIG4 136 aa5.08□□□□□ -1.6
PTPRD-209ENST00000477552 TENM2Q9NT68 2774 aa5.08□□□□□ -1.6
PTPRD-209ENST00000477552 IGLV9-49A0A0B4J1Y8 123 aa5.07□□□□□ -1.6
PTPRD-209ENST00000477552 C8orf87E5RJ46 101 aa5.07□□□□□ -1.6
PTPRD-209ENST00000477552 DEFB116Q30KQ4 102 aa5.07□□□□□ -1.6
PTPRD-209ENST00000477552 C8orf17Q9NRJ1 99 aa5.07□□□□□ -1.6
PTPRD-209ENST00000477552 LIMD2Q9BT23 127 aa5.06□□□□□ -1.6
PTPRD-209ENST00000477552 IGLV7-46A0A075B6I9 117 aa5.05□□□□□ -1.6
PTPRD-209ENST00000477552 IGLV7-43P04211 117 aa5.05□□□□□ -1.6
PTPRD-209ENST00000477552 Q96NJ1 140 aa5.05□□□□□ -1.6
PTPRD-209ENST00000477552 MRPL34Q9BQ48 92 aaKnown RBP5.05□□□□□ -1.6
PTPRD-209ENST00000477552 A0A0G2JQZ4 141 aa5.04□□□□□ -1.6
PTPRD-209ENST00000477552 LOC101927531A0A1B0GV80 90 aa5.04□□□□□ -1.6
PTPRD-209ENST00000477552 PANO1I0J062 215 aa5.04□□□□□ -1.6
PTPRD-209ENST00000477552 FAM229BQ4G0N7 80 aa5.04□□□□□ -1.6
PTPRD-209ENST00000477552 DNAH9Q9NYC9 4486 aa5.03□□□□□ -1.6
PTPRD-209ENST00000477552 SRRM2Q9UQ35 2752 aaKnown RBP5.01□□□□□ -1.61
PTPRD-209ENST00000477552 LINC00336Q6ZUF6 198 aa5.01□□□□□ -1.61
PTPRD-209ENST00000477552 MPLKIPQ8TAP9 179 aa5.01□□□□□ -1.61
PTPRD-209ENST00000477552 IGHV6-1A0A0B4J1U7 121 aa5□□□□□ -1.61
PTPRD-209ENST00000477552 VPS13DQ5THJ4 4388 aa4.99□□□□□ -1.61
PTPRD-209ENST00000477552 DNAH7Q8WXX0 4024 aa4.99□□□□□ -1.61
PTPRD-209ENST00000477552 NDUFS5O43920 106 aa4.98□□□□□ -1.61
PTPRD-209ENST00000477552 BRK1Q8WUW1 75 aa4.98□□□□□ -1.61
PTPRD-209ENST00000477552 LY6G6CO95867 125 aa4.97□□□□□ -1.61
PTPRD-209ENST00000477552 KRTAP21-3Q3LHN1 58 aa4.97□□□□□ -1.61
PTPRD-209ENST00000477552 CSMD3Q7Z407 3707 aa4.97□□□□□ -1.61
PTPRD-209ENST00000477552 FAM229AH3BQW9 127 aa4.96□□□□□ -1.62
PTPRD-209ENST00000477552 Q6ZSA8 131 aa4.96□□□□□ -1.62
PTPRD-209ENST00000477552 DNAH10Q8IVF4 4471 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms