RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 A0A0G2JQZ4 141 aa9.72□□□□□ -0.85
LINC00996-201ENST00000477392 IGFL1Q6UW32 110 aa9.72□□□□□ -0.85
LINC00996-201ENST00000477392 TRAV7A0A075B6U4 112 aa9.7□□□□□ -0.86
LINC00996-201ENST00000477392 SPRR1BP22528 89 aa9.7□□□□□ -0.86
LINC00996-201ENST00000477392 KRTAP13-1Q8IUC0 172 aa9.7□□□□□ -0.86
LINC00996-201ENST00000477392 DNAH17Q9UFH2 4485 aa9.7□□□□□ -0.86
LINC00996-201ENST00000477392 KMT2AQ03164 3969 aa9.69□□□□□ -0.86
LINC00996-201ENST00000477392 HECTD4Q9Y4D8 3996 aa9.69□□□□□ -0.86
LINC00996-201ENST00000477392 UBE2AP49459 152 aa9.69□□□□□ -0.86
LINC00996-201ENST00000477392 DNAH2Q9P225 4427 aa9.69□□□□□ -0.86
LINC00996-201ENST00000477392 SMIM20Q8N5G0 67 aa9.68□□□□□ -0.86
LINC00996-201ENST00000477392 RTL8CO15255 209 aa9.67□□□□□ -0.86
LINC00996-201ENST00000477392 DPH3Q96FX2 82 aa9.66□□□□□ -0.86
LINC00996-201ENST00000477392 SRRM2Q9UQ35 2752 aaKnown RBP9.65□□□□□ -0.86
LINC00996-201ENST00000477392 C20orf197Q8N268 126 aa9.64□□□□□ -0.87
LINC00996-201ENST00000477392 DSCR10P59022 87 aa9.63□□□□□ -0.87
LINC00996-201ENST00000477392 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
LINC00996-201ENST00000477392 DNAH6Q9C0G6 4158 aa9.61□□□□□ -0.87
LINC00996-201ENST00000477392 TMEM258P61165 79 aa9.6□□□□□ -0.87
LINC00996-201ENST00000477392 C1orf134Q5TEV5 83 aa9.6□□□□□ -0.87
LINC00996-201ENST00000477392 A0A087WSZ3 146 aa9.6□□□□□ -0.87
LINC00996-201ENST00000477392 PLAC8Q9NZF1 115 aa9.59□□□□□ -0.87
LINC00996-201ENST00000477392 TGP01266 2768 aa9.58□□□□□ -0.88
LINC00996-201ENST00000477392 K7EQZ3 153 aa9.58□□□□□ -0.88
LINC00996-201ENST00000477392 C4orf48Q5BLP8 95 aa9.58□□□□□ -0.88
LINC00996-201ENST00000477392 OCR1Q9BZK8 76 aa9.58□□□□□ -0.88
LINC00996-201ENST00000477392 IGLV5-52A0A0A0MRZ9 124 aa9.57□□□□□ -0.88
LINC00996-201ENST00000477392 LY6G6CO95867 125 aa9.57□□□□□ -0.88
LINC00996-201ENST00000477392 KLKP1Q107X0 134 aa9.57□□□□□ -0.88
LINC00996-201ENST00000477392 PSORS1C2Q9UIG4 136 aa9.55□□□□□ -0.88
LINC00996-201ENST00000477392 SNURFQ9Y675 71 aa9.55□□□□□ -0.88
LINC00996-201ENST00000477392 DNAH8Q96JB1 4490 aa9.54□□□□□ -0.88
LINC00996-201ENST00000477392 DEFB116Q30KQ4 102 aa9.54□□□□□ -0.88
LINC00996-201ENST00000477392 H7BZZ5 65 aa9.53□□□□□ -0.88
LINC00996-201ENST00000477392 LINC00483Q53H64 154 aa9.52□□□□□ -0.89
LINC00996-201ENST00000477392 ALMS1Q8TCU4 4167 aa9.52□□□□□ -0.89
LINC00996-201ENST00000477392 TMEM254Q8TBM7 123 aa9.49□□□□□ -0.89
LINC00996-201ENST00000477392 IGLV9-49A0A0B4J1Y8 123 aa9.48□□□□□ -0.89
LINC00996-201ENST00000477392 HCG22E2RYF7 251 aa9.48□□□□□ -0.89
LINC00996-201ENST00000477392 FAM30AQ9NZY2 134 aa9.48□□□□□ -0.89
LINC00996-201ENST00000477392 FRAS1Q86XX4 4008 aa9.48□□□□□ -0.89
LINC00996-201ENST00000477392 J3KT08 172 aa9.47□□□□□ -0.89
LINC00996-201ENST00000477392 RPL37AP61513 92 aaKnown RBP9.47□□□□□ -0.89
LINC00996-201ENST00000477392 KRTAP21-3Q3LHN1 58 aa9.47□□□□□ -0.89
LINC00996-201ENST00000477392 WWC2-AS2Q96NR7 200 aa9.47□□□□□ -0.89
LINC00996-201ENST00000477392 LINC00472Q9H8W2 130 aa9.47□□□□□ -0.89
LINC00996-201ENST00000477392 ZNF861PO60384 105 aa9.46□□□□□ -0.89
LINC00996-201ENST00000477392 ZNF706Q9Y5V0 76 aaPredicted RBP9.46□□□□□ -0.89
LINC00996-201ENST00000477392 DNAH11Q96DT5 4516 aa9.46□□□□□ -0.89
LINC00996-201ENST00000477392 DNAH5Q8TE73 4624 aa9.45□□□□□ -0.9
LINC00996-201ENST00000477392 A0A0U1RQV1 116 aa9.45□□□□□ -0.9
LINC00996-201ENST00000477392 KRTAP10-2P60368 255 aa9.45□□□□□ -0.9
LINC00996-201ENST00000477392 RPS28P62857 69 aaKnown RBP9.45□□□□□ -0.9
LINC00996-201ENST00000477392 FAM236DA0A1B0GTK5 79 aa9.44□□□□□ -0.9
LINC00996-201ENST00000477392 FAM236CP0DP71 79 aa9.44□□□□□ -0.9
LINC00996-201ENST00000477392 LCE6AA0A183 80 aa9.44□□□□□ -0.9
LINC00996-201ENST00000477392 LCE2DQ5TA82 110 aaPredicted RBP9.43□□□□□ -0.9
LINC00996-201ENST00000477392 NDUFC1O43677 76 aa9.42□□□□□ -0.9
LINC00996-201ENST00000477392 OXTP01178 125 aa9.41□□□□□ -0.9
LINC00996-201ENST00000477392 ANAPC11Q9NYG5 84 aa9.41□□□□□ -0.9
LINC00996-201ENST00000477392 WFDC13Q8IUB5 93 aa9.41□□□□□ -0.9
LINC00996-201ENST00000477392 PRR15Q8IV56 129 aa9.41□□□□□ -0.9
LINC00996-201ENST00000477392 A8MWP4 228 aa9.4□□□□□ -0.9
LINC00996-201ENST00000477392 IGLV7-43P04211 117 aa9.4□□□□□ -0.9
LINC00996-201ENST00000477392 KRTAP29-1A8MX34 341 aaPredicted RBP9.39□□□□□ -0.91
LINC00996-201ENST00000477392 MOBPQ13875 183 aa9.39□□□□□ -0.91
LINC00996-201ENST00000477392 Q96NJ1 140 aa9.39□□□□□ -0.91
LINC00996-201ENST00000477392 CIRBP-AS1Q8TBR5 109 aa9.38□□□□□ -0.91
LINC00996-201ENST00000477392 HRCT1Q6UXD1 115 aa9.36□□□□□ -0.91
LINC00996-201ENST00000477392 PKD1P98161 4303 aa9.36□□□□□ -0.91
LINC00996-201ENST00000477392 HYDINQ4G0P3 5121 aa9.36□□□□□ -0.91
LINC00996-201ENST00000477392 FAT2Q9NYQ8 4349 aa9.35□□□□□ -0.91
LINC00996-201ENST00000477392 Q6ZSA8 131 aa9.34□□□□□ -0.91
LINC00996-201ENST00000477392 KRTAP10-1P60331 282 aa9.33□□□□□ -0.92
LINC00996-201ENST00000477392 CASC2Q6XLA1 102 aa9.33□□□□□ -0.92
LINC00996-201ENST00000477392 ZCCHC13Q8WW36 166 aaKnown RBP9.33□□□□□ -0.92
LINC00996-201ENST00000477392 KRTAP3-3Q9BYR6 98 aa9.33□□□□□ -0.92
LINC00996-201ENST00000477392 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
LINC00996-201ENST00000477392 MMP24-AS1A0A0U1RRL7 71 aa9.31□□□□□ -0.92
LINC00996-201ENST00000477392 C5orf47Q569G3 176 aa9.31□□□□□ -0.92
LINC00996-201ENST00000477392 SERP1Q9Y6X1 66 aa9.31□□□□□ -0.92
LINC00996-201ENST00000477392 ATP5EP56381 51 aaPredicted RBP9.3□□□□□ -0.92
LINC00996-201ENST00000477392 NDUFB1O75438 58 aa9.27□□□□□ -0.93
LINC00996-201ENST00000477392 ASB16-AS1Q495Z4 193 aa9.24□□□□□ -0.93
LINC00996-201ENST00000477392 LRP1BQ9NZR2 4599 aa9.24□□□□□ -0.93
LINC00996-201ENST00000477392 hDV103S1A0JD37 113 aa9.23□□□□□ -0.93
LINC00996-201ENST00000477392 A0A1B0GVX0 72 aa9.22□□□□□ -0.93
LINC00996-201ENST00000477392 SVIPQ8NHG7 77 aa9.22□□□□□ -0.93
LINC00996-201ENST00000477392 C8orf17Q9NRJ1 99 aa9.22□□□□□ -0.93
LINC00996-201ENST00000477392 MP68P56378 58 aa9.21□□□□□ -0.93
LINC00996-201ENST00000477392 H0Y9P7 68 aa9.2□□□□□ -0.94
LINC00996-201ENST00000477392 CD164Q04900 197 aa9.2□□□□□ -0.94
LINC00996-201ENST00000477392 SSBP3-AS1Q7Z2R9 100 aa9.19□□□□□ -0.94
LINC00996-201ENST00000477392 IGHV6-1A0A0B4J1U7 121 aa9.19□□□□□ -0.94
LINC00996-201ENST00000477392 Q5XG85 94 aa9.19□□□□□ -0.94
LINC00996-201ENST00000477392 A0A087X002 238 aa9.18□□□□□ -0.94
LINC00996-201ENST00000477392 LINC00208Q96KT6 92 aa9.18□□□□□ -0.94
LINC00996-201ENST00000477392 KRTAP13-2Q52LG2 175 aa9.17□□□□□ -0.94
LINC00996-201ENST00000477392 SACSQ9NZJ4 4579 aa9.17□□□□□ -0.94
LINC00996-201ENST00000477392 TRAV22A0A0B4J277 110 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms