RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 YPEL4Q96NS1 127 aa3.97□□□□□ -1.77
BRCA1-214ENST00000477152 KRTAP16-1A8MUX0 517 aa3.96□□□□□ -1.77
BRCA1-214ENST00000477152 PCOTHQ58A44 107 aa3.96□□□□□ -1.77
BRCA1-214ENST00000477152 LINC00308Q8TCZ7 52 aa3.96□□□□□ -1.77
BRCA1-214ENST00000477152 NHP2Q9NX24 153 aaKnown RBP3.96□□□□□ -1.77
BRCA1-214ENST00000477152 TRBV7-6A0A0J9YX20 115 aa3.96□□□□□ -1.78
BRCA1-214ENST00000477152 KRTAP4-1Q9BYQ7 146 aa3.96□□□□□ -1.78
BRCA1-214ENST00000477152 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
BRCA1-214ENST00000477152 TCL1BO95988 128 aa3.95□□□□□ -1.78
BRCA1-214ENST00000477152 ELOF1P60002 83 aaKnown RBP3.95□□□□□ -1.78
BRCA1-214ENST00000477152 Q5XG85 94 aa3.95□□□□□ -1.78
BRCA1-214ENST00000477152 PMCHL2Q9BQD1 86 aa3.95□□□□□ -1.78
BRCA1-214ENST00000477152 OCR1Q9BZK8 76 aa3.95□□□□□ -1.78
BRCA1-214ENST00000477152 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
BRCA1-214ENST00000477152 A0A1B0GWB2 263 aa3.94□□□□□ -1.78
BRCA1-214ENST00000477152 SOSTDC1Q6X4U4 206 aa3.94□□□□□ -1.78
BRCA1-214ENST00000477152 DEFB105AQ8NG35 78 aa3.94□□□□□ -1.78
BRCA1-214ENST00000477152 ZNF815PA8K554 130 aa3.94□□□□□ -1.78
BRCA1-214ENST00000477152 F8WEM9 126 aa3.94□□□□□ -1.78
BRCA1-214ENST00000477152 M0R2T5 61 aa3.94□□□□□ -1.78
BRCA1-214ENST00000477152 C6orf99Q4VX62 202 aa3.94□□□□□ -1.78
BRCA1-214ENST00000477152 COX6B2Q6YFQ2 88 aa3.94□□□□□ -1.78
BRCA1-214ENST00000477152 SYS1-DBNDD2H3BUS1 97 aa3.93□□□□□ -1.78
BRCA1-214ENST00000477152 Q1RN00 199 aa3.93□□□□□ -1.78
BRCA1-214ENST00000477152 SCGB1D4Q6XE38 83 aa3.93□□□□□ -1.78
BRCA1-214ENST00000477152 Q6ZVH6 145 aa3.93□□□□□ -1.78
BRCA1-214ENST00000477152 IFITM1P13164 125 aa3.93□□□□□ -1.78
BRCA1-214ENST00000477152 MT3P25713 68 aa3.93□□□□□ -1.78
BRCA1-214ENST00000477152 VAMP3Q15836 100 aa3.92□□□□□ -1.78
BRCA1-214ENST00000477152 C20orf202A1L168 122 aa3.91□□□□□ -1.78
BRCA1-214ENST00000477152 A6NDN8 102 aa3.91□□□□□ -1.78
BRCA1-214ENST00000477152 TRAV13-2A0A0B4J235 113 aa3.91□□□□□ -1.78
BRCA1-214ENST00000477152 RPL37P61927 97 aaKnown RBP3.91□□□□□ -1.78
BRCA1-214ENST00000477152 MT1HP80294 61 aa3.9□□□□□ -1.79
BRCA1-214ENST00000477152 LINC01545Q5VT33 79 aa3.9□□□□□ -1.79
BRCA1-214ENST00000477152 IGLV5-48A0A075B6I7 105 aa3.89□□□□□ -1.79
BRCA1-214ENST00000477152 C1orf195Q5TG92 126 aa3.89□□□□□ -1.79
BRCA1-214ENST00000477152 Q6JHZ5 121 aa3.89□□□□□ -1.79
BRCA1-214ENST00000477152 ATP11AUNQ6ZP68 121 aa3.88□□□□□ -1.79
BRCA1-214ENST00000477152 COLCA2A8K830 154 aa3.87□□□□□ -1.79
BRCA1-214ENST00000477152 PCP2Q8IVA1 136 aa3.87□□□□□ -1.79
BRCA1-214ENST00000477152 SNCGO76070 127 aa3.86□□□□□ -1.79
BRCA1-214ENST00000477152 KRTDAPP60985 99 aa3.86□□□□□ -1.79
BRCA1-214ENST00000477152 SLC7A5P1Q8MH63 180 aa3.86□□□□□ -1.79
BRCA1-214ENST00000477152 KRTAP10-6P60371 365 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-214ENST00000477152 KRTAP19-2Q3LHN2 52 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST1H2BKO60814 126 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST1H2BJP06899 126 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 C3orf79P0CE67 100 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST1H2BOP23527 126 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST1H2BBP33778 126 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST1H2BDP58876 126 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST1H2BCP62807 126 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST2H2BEQ16778 126 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.85□□□□□ -1.79
BRCA1-214ENST00000477152 MUSTN1Q8IVN3 82 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 PPDPFLQ8WWR9 84 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST1H2BHQ93079 126 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST1H2BNQ99877 126 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 HIST1H2BMQ99879 126 aa3.85□□□□□ -1.79
BRCA1-214ENST00000477152 hADV29S1A0JD25 119 aa3.84□□□□□ -1.79
BRCA1-214ENST00000477152 CLEC2BQ92478 149 aa3.84□□□□□ -1.79
BRCA1-214ENST00000477152 Q6Q795 121 aa3.83□□□□□ -1.8
BRCA1-214ENST00000477152 SMIM11BQ8TCY0 68 aa3.83□□□□□ -1.8
BRCA1-214ENST00000477152 SS18L2Q9UHA2 77 aa3.83□□□□□ -1.8
BRCA1-214ENST00000477152 TRBV20-1A0A075B6N2 111 aa3.83□□□□□ -1.8
BRCA1-214ENST00000477152 TRBV7-7A0A0K0K1E9 115 aa3.83□□□□□ -1.8
BRCA1-214ENST00000477152 HSBP1L1C9JCN9 74 aa3.83□□□□□ -1.8
BRCA1-214ENST00000477152 SNHG12Q9BXW3 62 aa3.83□□□□□ -1.8
BRCA1-214ENST00000477152 TTTY13Q9BZ97 58 aa3.83□□□□□ -1.8
BRCA1-214ENST00000477152 LST1O00453 97 aa3.82□□□□□ -1.8
BRCA1-214ENST00000477152 BVES-AS1Q5T3Y7 98 aa3.82□□□□□ -1.8
BRCA1-214ENST00000477152 LINC00575Q6W349 94 aa3.82□□□□□ -1.8
BRCA1-214ENST00000477152 OCIAD2Q56VL3 154 aa3.82□□□□□ -1.8
BRCA1-214ENST00000477152 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.82□□□□□ -1.8
BRCA1-214ENST00000477152 C12orf57Q99622 126 aa3.82□□□□□ -1.8
BRCA1-214ENST00000477152 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
BRCA1-214ENST00000477152 Q6ZQY7 126 aa3.81□□□□□ -1.8
BRCA1-214ENST00000477152 COA6Q5JTJ3 125 aaKnown RBP3.8□□□□□ -1.8
BRCA1-214ENST00000477152 A0A0G2JQZ4 141 aa3.8□□□□□ -1.8
BRCA1-214ENST00000477152 OBSCN-AS1Q96MR7 158 aa3.8□□□□□ -1.8
BRCA1-214ENST00000477152 IGFL1Q6UW32 110 aa3.79□□□□□ -1.8
BRCA1-214ENST00000477152 Q96NJ1 140 aa3.79□□□□□ -1.8
BRCA1-214ENST00000477152 ATOH7Q8N100 152 aa3.78□□□□□ -1.8
BRCA1-214ENST00000477152 S100A2P29034 98 aa3.77□□□□□ -1.81
BRCA1-214ENST00000477152 FSIP2Q5CZC0 6907 aa3.77□□□□□ -1.81
BRCA1-214ENST00000477152 TEN1Q86WV5 123 aa3.76□□□□□ -1.81
BRCA1-214ENST00000477152 H0YGX0 51 aa3.75□□□□□ -1.81
BRCA1-214ENST00000477152 HIST1H4GQ99525 98 aa3.75□□□□□ -1.81
BRCA1-214ENST00000477152 FAM236DA0A1B0GTK5 79 aa3.74□□□□□ -1.81
BRCA1-214ENST00000477152 FAM236CP0DP71 79 aa3.74□□□□□ -1.81
BRCA1-214ENST00000477152 DSCR10P59022 87 aa3.74□□□□□ -1.81
BRCA1-214ENST00000477152 RAB37Q96AX2 223 aa3.74□□□□□ -1.81
BRCA1-214ENST00000477152 C20orf166-AS1Q96NR2 134 aa3.74□□□□□ -1.81
BRCA1-214ENST00000477152 CXCL6P80162 114 aa3.73□□□□□ -1.81
BRCA1-214ENST00000477152 RBM12B-AS1Q9P1G2 102 aa3.73□□□□□ -1.81
BRCA1-214ENST00000477152 A8MUU9 505 aa3.72□□□□□ -1.81
BRCA1-214ENST00000477152 H3BQ85 93 aa3.72□□□□□ -1.81
BRCA1-214ENST00000477152 A0A1B0GX51 115 aa3.72□□□□□ -1.81
BRCA1-214ENST00000477152 H3BUT2 72 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms