RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 SCXQ7RTU7 201 aa7.16□□□□□ -1.26
NUP188-205ENST00000477069 Q8NBF4 154 aa7.16□□□□□ -1.26
NUP188-205ENST00000477069 A0A087WTM6 91 aa7.16□□□□□ -1.26
NUP188-205ENST00000477069 Q5XG85 94 aa7.15□□□□□ -1.26
NUP188-205ENST00000477069 OXTP01178 125 aa7.15□□□□□ -1.27
NUP188-205ENST00000477069 SEC61GP60059 68 aa7.15□□□□□ -1.27
NUP188-205ENST00000477069 SPACA4Q8TDM5 124 aa7.15□□□□□ -1.27
NUP188-205ENST00000477069 BCE1O60756 84 aa7.14□□□□□ -1.27
NUP188-205ENST00000477069 FUSP35637 526 aaKnown RBP eCLIP7.14□□□□□ -1.27
NUP188-205ENST00000477069 IGLV8-61A0A075B6I0 122 aa7.14□□□□□ -1.27
NUP188-205ENST00000477069 NREPQ16612 68 aa7.14□□□□□ -1.27
NUP188-205ENST00000477069 LINC00476Q8WZB0 136 aa7.14□□□□□ -1.27
NUP188-205ENST00000477069 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.14□□□□□ -1.27
NUP188-205ENST00000477069 DNAH8Q96JB1 4490 aa7.13□□□□□ -1.27
NUP188-205ENST00000477069 HIGD2AQ9BW72 106 aa7.13□□□□□ -1.27
NUP188-205ENST00000477069 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
NUP188-205ENST00000477069 CYSTM1Q9H1C7 97 aa7.13□□□□□ -1.27
NUP188-205ENST00000477069 IGKV4-1P06312 121 aa7.12□□□□□ -1.27
NUP188-205ENST00000477069 SPRR1BP22528 89 aa7.12□□□□□ -1.27
NUP188-205ENST00000477069 PRO0628Q9UI54 55 aa7.12□□□□□ -1.27
NUP188-205ENST00000477069 IGFL1Q6UW32 110 aa7.11□□□□□ -1.27
NUP188-205ENST00000477069 FRAS1Q86XX4 4008 aa7.1□□□□□ -1.27
NUP188-205ENST00000477069 F8WEM9 126 aa7.1□□□□□ -1.27
NUP188-205ENST00000477069 BPY2O14599 106 aa7.1□□□□□ -1.27
NUP188-205ENST00000477069 Q8N9L7 120 aa7.1□□□□□ -1.27
NUP188-205ENST00000477069 LINC00336Q6ZUF6 198 aa7.09□□□□□ -1.27
NUP188-205ENST00000477069 RTL8CO15255 209 aa7.09□□□□□ -1.27
NUP188-205ENST00000477069 TMEM258P61165 79 aa7.09□□□□□ -1.27
NUP188-205ENST00000477069 A0A0G2JQZ4 141 aa7.08□□□□□ -1.28
NUP188-205ENST00000477069 TRAV7A0A075B6U4 112 aa7.08□□□□□ -1.28
NUP188-205ENST00000477069 ALMS1Q8TCU4 4167 aa7.07□□□□□ -1.28
NUP188-205ENST00000477069 UBE2AP49459 152 aa7.07□□□□□ -1.28
NUP188-205ENST00000477069 SRRM2Q9UQ35 2752 aaKnown RBP7.06□□□□□ -1.28
NUP188-205ENST00000477069 DNAH11Q96DT5 4516 aa7.06□□□□□ -1.28
NUP188-205ENST00000477069 V9GYY9 64 aa7.06□□□□□ -1.28
NUP188-205ENST00000477069 DSCR10P59022 87 aa7.04□□□□□ -1.28
NUP188-205ENST00000477069 DNAH5Q8TE73 4624 aa7.04□□□□□ -1.28
NUP188-205ENST00000477069 C1orf134Q5TEV5 83 aa7.04□□□□□ -1.28
NUP188-205ENST00000477069 PLAC8Q9NZF1 115 aa7.04□□□□□ -1.28
NUP188-205ENST00000477069 FAM236DA0A1B0GTK5 79 aa7.02□□□□□ -1.29
NUP188-205ENST00000477069 FAM236CP0DP71 79 aa7.02□□□□□ -1.29
NUP188-205ENST00000477069 HYDINQ4G0P3 5121 aa7.01□□□□□ -1.29
NUP188-205ENST00000477069 PKD1P98161 4303 aa7.01□□□□□ -1.29
NUP188-205ENST00000477069 IGLV5-52A0A0A0MRZ9 124 aa7□□□□□ -1.29
NUP188-205ENST00000477069 C20orf197Q8N268 126 aa7□□□□□ -1.29
NUP188-205ENST00000477069 OCR1Q9BZK8 76 aa7□□□□□ -1.29
NUP188-205ENST00000477069 A0A087WSZ3 146 aa7□□□□□ -1.29
NUP188-205ENST00000477069 LY6G6CO95867 125 aa7□□□□□ -1.29
NUP188-205ENST00000477069 LINC00483Q53H64 154 aa7□□□□□ -1.29
NUP188-205ENST00000477069 K7EQZ3 153 aa7□□□□□ -1.29
NUP188-205ENST00000477069 KLKP1Q107X0 134 aa7□□□□□ -1.29
NUP188-205ENST00000477069 PSORS1C2Q9UIG4 136 aa7□□□□□ -1.29
NUP188-205ENST00000477069 FAT2Q9NYQ8 4349 aa6.99□□□□□ -1.29
NUP188-205ENST00000477069 TGP01266 2768 aa6.98□□□□□ -1.29
NUP188-205ENST00000477069 A0A0U1RQV1 116 aa6.98□□□□□ -1.29
NUP188-205ENST00000477069 C1orf195Q5TG92 126 aa6.97□□□□□ -1.29
NUP188-205ENST00000477069 WWC2-AS2Q96NR7 200 aa6.96□□□□□ -1.3
NUP188-205ENST00000477069 H7BZZ5 65 aa6.95□□□□□ -1.3
NUP188-205ENST00000477069 DEFB116Q30KQ4 102 aa6.94□□□□□ -1.3
NUP188-205ENST00000477069 LINC00472Q9H8W2 130 aa6.94□□□□□ -1.3
NUP188-205ENST00000477069 ZNF861PO60384 105 aa6.94□□□□□ -1.3
NUP188-205ENST00000477069 SNURFQ9Y675 71 aa6.94□□□□□ -1.3
NUP188-205ENST00000477069 KRTAP10-2P60368 255 aa6.93□□□□□ -1.3
NUP188-205ENST00000477069 ZNF706Q9Y5V0 76 aaPredicted RBP6.93□□□□□ -1.3
NUP188-205ENST00000477069 LCE6AA0A183 80 aa6.93□□□□□ -1.3
NUP188-205ENST00000477069 RPL37AP61513 92 aaKnown RBP6.93□□□□□ -1.3
NUP188-205ENST00000477069 HCG22E2RYF7 251 aa6.92□□□□□ -1.3
NUP188-205ENST00000477069 TMEM254Q8TBM7 123 aa6.92□□□□□ -1.3
NUP188-205ENST00000477069 BRK1Q8WUW1 75 aa6.92□□□□□ -1.3
NUP188-205ENST00000477069 IGLV9-49A0A0B4J1Y8 123 aa6.91□□□□□ -1.3
NUP188-205ENST00000477069 FAM30AQ9NZY2 134 aa6.9□□□□□ -1.3
NUP188-205ENST00000477069 IGLV7-43P04211 117 aa6.89□□□□□ -1.31
NUP188-205ENST00000477069 KRTAP29-1A8MX34 341 aaPredicted RBP6.89□□□□□ -1.31
NUP188-205ENST00000477069 Q96NJ1 140 aa6.89□□□□□ -1.31
NUP188-205ENST00000477069 A8MWP4 228 aa6.88□□□□□ -1.31
NUP188-205ENST00000477069 NDUFC1O43677 76 aa6.88□□□□□ -1.31
NUP188-205ENST00000477069 Q6ZSA8 131 aa6.88□□□□□ -1.31
NUP188-205ENST00000477069 CIRBP-AS1Q8TBR5 109 aa6.88□□□□□ -1.31
NUP188-205ENST00000477069 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
NUP188-205ENST00000477069 PRR15Q8IV56 129 aa6.87□□□□□ -1.31
NUP188-205ENST00000477069 FP248Q71RG6 208 aaPredicted RBP6.87□□□□□ -1.31
NUP188-205ENST00000477069 ANAPC11Q9NYG5 84 aa6.87□□□□□ -1.31
NUP188-205ENST00000477069 LRP1BQ9NZR2 4599 aa6.86□□□□□ -1.31
NUP188-205ENST00000477069 MOBPQ13875 183 aa6.86□□□□□ -1.31
NUP188-205ENST00000477069 SACSQ9NZJ4 4579 aa6.86□□□□□ -1.31
NUP188-205ENST00000477069 SMIM26A0A096LP01 95 aa6.85□□□□□ -1.31
NUP188-205ENST00000477069 KRTAP10-1P60331 282 aa6.84□□□□□ -1.31
NUP188-205ENST00000477069 WFDC13Q8IUB5 93 aa6.84□□□□□ -1.31
NUP188-205ENST00000477069 ZCCHC13Q8WW36 166 aaKnown RBP6.83□□□□□ -1.32
NUP188-205ENST00000477069 MMP24-AS1A0A0U1RRL7 71 aa6.81□□□□□ -1.32
NUP188-205ENST00000477069 CASC2Q6XLA1 102 aa6.81□□□□□ -1.32
NUP188-205ENST00000477069 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
NUP188-205ENST00000477069 ATP5EP56381 51 aaPredicted RBP6.79□□□□□ -1.32
NUP188-205ENST00000477069 PMAIP1Q13794 54 aa6.78□□□□□ -1.32
NUP188-205ENST00000477069 VPS13BQ7Z7G8 4022 aa6.76□□□□□ -1.33
NUP188-205ENST00000477069 NDUFB1O75438 58 aa6.76□□□□□ -1.33
NUP188-205ENST00000477069 CD164Q04900 197 aa6.76□□□□□ -1.33
NUP188-205ENST00000477069 PKHD1P08F94 4074 aa6.75□□□□□ -1.33
NUP188-205ENST00000477069 MPLKIPQ8TAP9 179 aa6.75□□□□□ -1.33
NUP188-205ENST00000477069 SSBP3-AS1Q7Z2R9 100 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms