RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 FDCSPQ8NFU4 85 aa2.11□□□□□ -2.07
ITGA4-208ENST00000476824 COX7B2Q8TF08 81 aa2.11□□□□□ -2.07
ITGA4-208ENST00000476824 PLAC8Q9NZF1 115 aa2.11□□□□□ -2.07
ITGA4-208ENST00000476824 TMEM14CQ9P0S9 112 aa2.11□□□□□ -2.07
ITGA4-208ENST00000476824 IGKV3-7A0A075B6H7 116 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 TRAV21A0A0B4J279 112 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 TRAV40A0A0B4J280 105 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 LCE6AA0A183 80 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 M0R3E3 92 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 UQCR11O14957 56 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 IGKV1-17P01599 117 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 MGPP08493 103 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 COX6B1P14854 86 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 PDE6HQ13956 83 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 C9orf163Q8N9P6 203 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 LINC00208Q96KT6 92 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 DNAH1Q9P2D7 4330 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 CR1P17927 2039 aa2.1□□□□□ -2.07
ITGA4-208ENST00000476824 MED12Q93074 2177 aa2.09□□□□□ -2.07
ITGA4-208ENST00000476824 IGLV4-69A0A075B6H9 119 aa2.09□□□□□ -2.07
ITGA4-208ENST00000476824 TRBV6-1A0A0K0K1D8 114 aa2.09□□□□□ -2.07
ITGA4-208ENST00000476824 IGIPA6NJ69 53 aa2.09□□□□□ -2.07
ITGA4-208ENST00000476824 I3L3M4 83 aa2.09□□□□□ -2.07
ITGA4-208ENST00000476824 C10orf113Q5VZT2 155 aa2.09□□□□□ -2.07
ITGA4-208ENST00000476824 LYSTQ99698 3801 aa2.09□□□□□ -2.07
ITGA4-208ENST00000476824 HIGD2AQ9BW72 106 aa2.09□□□□□ -2.07
ITGA4-208ENST00000476824 TTTY12Q9BZ98 90 aa2.09□□□□□ -2.07
ITGA4-208ENST00000476824 TMEM167BQ9NRX6 74 aa2.09□□□□□ -2.07
ITGA4-208ENST00000476824 USF3Q68DE3 2245 aa2.09□□□□□ -2.08
ITGA4-208ENST00000476824 ABCA1O95477 2261 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 ARHGAP32A7KAX9 2087 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 CSMD3Q7Z407 3707 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 H0Y9P7 68 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 PIN1P1O15428 100 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 CCL3L1P16619 93 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 PDE6GP18545 87 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 CCL18P55774 89 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 WFDC9Q8NEX5 89 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 PSORS1C2Q9UIG4 136 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 TIMM8BQ9Y5J9 83 aaPredicted RBP2.08□□□□□ -2.08
ITGA4-208ENST00000476824 DNAH3Q8TD57 4116 aa2.08□□□□□ -2.08
ITGA4-208ENST00000476824 DNAJC13O75165 2243 aa2.07□□□□□ -2.08
ITGA4-208ENST00000476824 IGKV2D-24A0A075B6R9 120 aa2.07□□□□□ -2.08
ITGA4-208ENST00000476824 SPTY2D1-AS1A0A0U1RR47 76 aa2.07□□□□□ -2.08
ITGA4-208ENST00000476824 M0R1W7 72 aa2.07□□□□□ -2.08
ITGA4-208ENST00000476824 ZNF137PP52743 207 aa2.07□□□□□ -2.08
ITGA4-208ENST00000476824 DEFB109BQ30KR1 87 aa2.07□□□□□ -2.08
ITGA4-208ENST00000476824 SPATA8Q6RVD6 105 aa2.07□□□□□ -2.08
ITGA4-208ENST00000476824 ZCCHC13Q8WW36 166 aaKnown RBP2.07□□□□□ -2.08
ITGA4-208ENST00000476824 SMR3AQ99954 134 aa2.07□□□□□ -2.08
ITGA4-208ENST00000476824 TENM3Q9P273 2699 aa2.07□□□□□ -2.08
ITGA4-208ENST00000476824 DNAH9Q9NYC9 4486 aa2.06□□□□□ -2.08
ITGA4-208ENST00000476824 H0YGX0 51 aa2.06□□□□□ -2.08
ITGA4-208ENST00000476824 KRTAP10-10P60014 251 aa2.06□□□□□ -2.08
ITGA4-208ENST00000476824 FXYD3Q14802 87 aa2.06□□□□□ -2.08
ITGA4-208ENST00000476824 DEFB133Q30KQ1 61 aa2.06□□□□□ -2.08
ITGA4-208ENST00000476824 HCP5Q6MZN7 132 aa2.06□□□□□ -2.08
ITGA4-208ENST00000476824 SPRR4Q96PI1 79 aa2.06□□□□□ -2.08
ITGA4-208ENST00000476824 WFDC10AQ9H1F0 79 aa2.06□□□□□ -2.08
ITGA4-208ENST00000476824 COL7A1Q02388 2944 aa2.06□□□□□ -2.08
ITGA4-208ENST00000476824 ABCA13Q86UQ4 5058 aa2.06□□□□□ -2.08
ITGA4-208ENST00000476824 ARFGEF3Q5TH69 2177 aa2.05□□□□□ -2.08
ITGA4-208ENST00000476824 ROS1P08922 2347 aa2.05□□□□□ -2.08
ITGA4-208ENST00000476824 NDUFA3O95167 84 aa2.05□□□□□ -2.08
ITGA4-208ENST00000476824 ARL14EPLP0DKL9 152 aa2.05□□□□□ -2.08
ITGA4-208ENST00000476824 DEFB114Q30KQ6 69 aa2.05□□□□□ -2.08
ITGA4-208ENST00000476824 Q6ZTI0 123 aa2.05□□□□□ -2.08
ITGA4-208ENST00000476824 PATE1Q8WXA2 126 aa2.05□□□□□ -2.08
ITGA4-208ENST00000476824 GAFA1Q96PS6 74 aa2.05□□□□□ -2.08
ITGA4-208ENST00000476824 FRAS1Q86XX4 4008 aa2.04□□□□□ -2.08
ITGA4-208ENST00000476824 DNAH7Q8WXX0 4024 aa2.04□□□□□ -2.08
ITGA4-208ENST00000476824 TRGV4A0A0C4DH28 118 aa2.04□□□□□ -2.08
ITGA4-208ENST00000476824 IGKV3OR2-268A0A0C4DH90 116 aa2.04□□□□□ -2.08
ITGA4-208ENST00000476824 CTSGP08311 255 aa2.04□□□□□ -2.08
ITGA4-208ENST00000476824 RNASE3P12724 160 aaKnown RBP2.04□□□□□ -2.08
ITGA4-208ENST00000476824 SPINK7P58062 85 aa2.04□□□□□ -2.08
ITGA4-208ENST00000476824 SPINT4Q6UDR6 99 aa2.04□□□□□ -2.08
ITGA4-208ENST00000476824 LINC00322Q6ZN03 302 aaPredicted RBP2.04□□□□□ -2.08
ITGA4-208ENST00000476824 PRO2289Q9P1D8 64 aa2.04□□□□□ -2.08
ITGA4-208ENST00000476824 UBR4Q5T4S7 5183 aa2.04□□□□□ -2.08
ITGA4-208ENST00000476824 PRR14LQ5THK1 2151 aa2.03□□□□□ -2.08
ITGA4-208ENST00000476824 KIAA1109Q2LD37 5005 aa2.03□□□□□ -2.08
ITGA4-208ENST00000476824 STARD9Q9P2P6 4700 aa2.03□□□□□ -2.08
ITGA4-208ENST00000476824 PLECQ15149 4684 aaKnown RBP2.03□□□□□ -2.08
ITGA4-208ENST00000476824 TFF3Q07654 80 aa2.03□□□□□ -2.08
ITGA4-208ENST00000476824 COX17Q14061 63 aa2.03□□□□□ -2.08
ITGA4-208ENST00000476824 KLK9Q9UKQ9 250 aa2.03□□□□□ -2.08
ITGA4-208ENST00000476824 FREM1Q5H8C1 2179 aa2.02□□□□□ -2.09
ITGA4-208ENST00000476824 IGKV2-28A0A075B6P5 120 aa2.02□□□□□ -2.09
ITGA4-208ENST00000476824 NDUFA4O00483 81 aa2.02□□□□□ -2.09
ITGA4-208ENST00000476824 IGKV2D-28P01615 120 aa2.02□□□□□ -2.09
ITGA4-208ENST00000476824 IGLV3-1P01715 115 aa2.02□□□□□ -2.09
ITGA4-208ENST00000476824 DEFB112Q30KQ8 113 aa2.02□□□□□ -2.09
ITGA4-208ENST00000476824 ZNF625Q96I27 306 aaPredicted RBP2.02□□□□□ -2.09
ITGA4-208ENST00000476824 R4GN34 69 aa2.02□□□□□ -2.09
ITGA4-208ENST00000476824 HERC1Q15751 4861 aa2.02□□□□□ -2.09
ITGA4-208ENST00000476824 IGKV2-40A0A087WW87 121 aaPredicted RBP2.01□□□□□ -2.09
ITGA4-208ENST00000476824 LOC110117498A0A087WWA1 95 aa2.01□□□□□ -2.09
ITGA4-208ENST00000476824 SPRR5A0A1B0GTR4 108 aa2.01□□□□□ -2.09
ITGA4-208ENST00000476824 TRBV6-4A0A1B0GX49 114 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms