RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ELOF1P60002 83 aaKnown RBP3.25□□□□□ -1.89
CCDC39-204ENST00000476379 IGLV6-57P01721 117 aa3.25□□□□□ -1.89
CCDC39-204ENST00000476379 LINC01556Q5JQF7 62 aa3.25□□□□□ -1.89
CCDC39-204ENST00000476379 ATP5EP2Q5VTU8 51 aa3.25□□□□□ -1.89
CCDC39-204ENST00000476379 Q8N377 158 aa3.25□□□□□ -1.89
CCDC39-204ENST00000476379 CIRBP-AS1Q8TBR5 109 aa3.25□□□□□ -1.89
CCDC39-204ENST00000476379 LINC00476Q8WZB0 136 aa3.25□□□□□ -1.89
CCDC39-204ENST00000476379 HUWE1Q7Z6Z7 4374 aaKnown RBP3.24□□□□□ -1.89
CCDC39-204ENST00000476379 PDE6GP18545 87 aa3.24□□□□□ -1.89
CCDC39-204ENST00000476379 STARD9Q9P2P6 4700 aa3.24□□□□□ -1.89
CCDC39-204ENST00000476379 H7BZZ5 65 aa3.24□□□□□ -1.89
CCDC39-204ENST00000476379 DNAH7Q8WXX0 4024 aa3.24□□□□□ -1.89
CCDC39-204ENST00000476379 DNAH10Q8IVF4 4471 aa3.23□□□□□ -1.89
CCDC39-204ENST00000476379 J3QL48 77 aa3.23□□□□□ -1.89
CCDC39-204ENST00000476379 WIPF1O43516 503 aa3.23□□□□□ -1.89
CCDC39-204ENST00000476379 FAM229BQ4G0N7 80 aa3.23□□□□□ -1.89
CCDC39-204ENST00000476379 LINC00528Q8N1L1 170 aa3.23□□□□□ -1.89
CCDC39-204ENST00000476379 SPINK1P00995 79 aa3.23□□□□□ -1.89
CCDC39-204ENST00000476379 PLECQ15149 4684 aaKnown RBP3.23□□□□□ -1.89
CCDC39-204ENST00000476379 TRBV7-4A0A0J9YYF1 115 aa3.23□□□□□ -1.89
CCDC39-204ENST00000476379 NDUFB1O75438 58 aa3.22□□□□□ -1.89
CCDC39-204ENST00000476379 PRR15LQ9BU68 103 aa3.22□□□□□ -1.89
CCDC39-204ENST00000476379 KMT2AQ03164 3969 aa3.22□□□□□ -1.89
CCDC39-204ENST00000476379 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
CCDC39-204ENST00000476379 A0A1W2PNM2 257 aa3.22□□□□□ -1.89
CCDC39-204ENST00000476379 Q6ZRX8 168 aa3.22□□□□□ -1.89
CCDC39-204ENST00000476379 B9D2Q9BPU9 175 aa3.22□□□□□ -1.89
CCDC39-204ENST00000476379 DHRS4-AS1Q9P1J3 65 aa3.22□□□□□ -1.89
CCDC39-204ENST00000476379 SERP1Q9Y6X1 66 aa3.22□□□□□ -1.89
CCDC39-204ENST00000476379 DNAH9Q9NYC9 4486 aa3.22□□□□□ -1.89
CCDC39-204ENST00000476379 EPM2AB3EWF7 344 aa3.21□□□□□ -1.9
CCDC39-204ENST00000476379 PRR34Q9NV39 138 aa3.21□□□□□ -1.9
CCDC39-204ENST00000476379 H0Y9P7 68 aa3.21□□□□□ -1.9
CCDC39-204ENST00000476379 A8MUN3 132 aa3.21□□□□□ -1.9
CCDC39-204ENST00000476379 HCG22E2RYF7 251 aa3.21□□□□□ -1.9
CCDC39-204ENST00000476379 MOBPQ13875 183 aa3.21□□□□□ -1.9
CCDC39-204ENST00000476379 SPAG11AQ6PDA7 123 aa3.21□□□□□ -1.9
CCDC39-204ENST00000476379 FRAS1Q86XX4 4008 aa3.2□□□□□ -1.9
CCDC39-204ENST00000476379 CXCL6P80162 114 aa3.2□□□□□ -1.9
CCDC39-204ENST00000476379 IGFL1Q6UW32 110 aa3.19□□□□□ -1.9
CCDC39-204ENST00000476379 Q8NBF4 154 aa3.19□□□□□ -1.9
CCDC39-204ENST00000476379 LINC00612Q8N6U2 182 aa3.19□□□□□ -1.9
CCDC39-204ENST00000476379 LOC110117498A0A087WWA1 95 aa3.19□□□□□ -1.9
CCDC39-204ENST00000476379 HYDINQ4G0P3 5121 aa3.18□□□□□ -1.9
CCDC39-204ENST00000476379 SPINT4Q6UDR6 99 aa3.18□□□□□ -1.9
CCDC39-204ENST00000476379 C1orf64Q8NEQ6 169 aa3.18□□□□□ -1.9
CCDC39-204ENST00000476379 KRTAP1-5Q9BYS1 174 aa3.18□□□□□ -1.9
CCDC39-204ENST00000476379 IGLV1-50A0A075B6I6 118 aa3.18□□□□□ -1.9
CCDC39-204ENST00000476379 Q5XG85 94 aa3.17□□□□□ -1.9
CCDC39-204ENST00000476379 GVQW2A0A096LPI5 108 aaPredicted RBP3.17□□□□□ -1.9
CCDC39-204ENST00000476379 ATP5EP56381 51 aaPredicted RBP3.17□□□□□ -1.9
CCDC39-204ENST00000476379 FP248Q71RG6 208 aaPredicted RBP3.17□□□□□ -1.9
CCDC39-204ENST00000476379 A8MU10 97 aa3.16□□□□□ -1.9
CCDC39-204ENST00000476379 IGKV2D-30A0A075B6S6 120 aa3.16□□□□□ -1.9
CCDC39-204ENST00000476379 IGKV2-30P06310 120 aa3.16□□□□□ -1.9
CCDC39-204ENST00000476379 LCA10Q71F78 164 aa3.15□□□□□ -1.9
CCDC39-204ENST00000476379 SPACA4Q8TDM5 124 aa3.15□□□□□ -1.9
CCDC39-204ENST00000476379 KCNQ1DNQ9H478 68 aa3.15□□□□□ -1.9
CCDC39-204ENST00000476379 PANO1I0J062 215 aa3.15□□□□□ -1.91
CCDC39-204ENST00000476379 DSCR10P59022 87 aa3.15□□□□□ -1.91
CCDC39-204ENST00000476379 NDUFC1O43677 76 aa3.15□□□□□ -1.91
CCDC39-204ENST00000476379 RBM12B-AS1Q9P1G2 102 aa3.15□□□□□ -1.91
CCDC39-204ENST00000476379 IGLV5-52A0A0A0MRZ9 124 aa3.14□□□□□ -1.91
CCDC39-204ENST00000476379 KLKP1Q107X0 134 aa3.14□□□□□ -1.91
CCDC39-204ENST00000476379 hDV103S1A0JD37 113 aa3.14□□□□□ -1.91
CCDC39-204ENST00000476379 KRTAP11-1Q8IUC1 163 aa3.14□□□□□ -1.91
CCDC39-204ENST00000476379 RYR3Q15413 4870 aa3.13□□□□□ -1.91
CCDC39-204ENST00000476379 H3BQ85 93 aa3.13□□□□□ -1.91
CCDC39-204ENST00000476379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.13□□□□□ -1.91
CCDC39-204ENST00000476379 RPS28P62857 69 aaKnown RBP3.13□□□□□ -1.91
CCDC39-204ENST00000476379 OCR1Q9BZK8 76 aa3.13□□□□□ -1.91
CCDC39-204ENST00000476379 C8orf87E5RJ46 101 aa3.13□□□□□ -1.91
CCDC39-204ENST00000476379 KTN1-AS1Q86SY8 53 aa3.13□□□□□ -1.91
CCDC39-204ENST00000476379 SMR3BP02814 79 aaPredicted RBP3.12□□□□□ -1.91
CCDC39-204ENST00000476379 TRAV22A0A0B4J277 110 aa3.12□□□□□ -1.91
CCDC39-204ENST00000476379 C16orf90A8MZG2 172 aa3.12□□□□□ -1.91
CCDC39-204ENST00000476379 PRR15Q8IV56 129 aa3.12□□□□□ -1.91
CCDC39-204ENST00000476379 PRR26Q8N8Z3 221 aa3.11□□□□□ -1.91
CCDC39-204ENST00000476379 LINC01600Q96MT4 127 aa3.11□□□□□ -1.91
CCDC39-204ENST00000476379 KRTAP26-1Q6PEX3 210 aa3.11□□□□□ -1.91
CCDC39-204ENST00000476379 PLA2G2DQ9UNK4 145 aa3.11□□□□□ -1.91
CCDC39-204ENST00000476379 NBDYA0A0U1RRE5 68 aa3.11□□□□□ -1.91
CCDC39-204ENST00000476379 RTL8CO15255 209 aa3.11□□□□□ -1.91
CCDC39-204ENST00000476379 C14orf177Q52M58 125 aa3.11□□□□□ -1.91
CCDC39-204ENST00000476379 KRTAP7-1Q8IUC3 87 aa3.11□□□□□ -1.91
CCDC39-204ENST00000476379 WWC2-AS2Q96NR7 200 aa3.1□□□□□ -1.91
CCDC39-204ENST00000476379 TNP2Q05952 138 aa3.1□□□□□ -1.91
CCDC39-204ENST00000476379 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
CCDC39-204ENST00000476379 PKHD1P08F94 4074 aa3.1□□□□□ -1.91
CCDC39-204ENST00000476379 KIAA1109Q2LD37 5005 aa3.09□□□□□ -1.91
CCDC39-204ENST00000476379 COA5Q86WW8 74 aa3.09□□□□□ -1.92
CCDC39-204ENST00000476379 PSORS1C2Q9UIG4 136 aa3.09□□□□□ -1.92
CCDC39-204ENST00000476379 DNAH1Q9P2D7 4330 aa3.09□□□□□ -1.92
CCDC39-204ENST00000476379 SEC61BP60468 96 aaKnown RBP3.09□□□□□ -1.92
CCDC39-204ENST00000476379 LUZP6Q538Z0 58 aa3.09□□□□□ -1.92
CCDC39-204ENST00000476379 C7orf65Q6ZTY9 151 aa3.09□□□□□ -1.92
CCDC39-204ENST00000476379 FAT1Q14517 4588 aa3.08□□□□□ -1.92
CCDC39-204ENST00000476379 IGLV5-48A0A075B6I7 105 aa3.08□□□□□ -1.92
CCDC39-204ENST00000476379 DNAH11Q96DT5 4516 aa3.08□□□□□ -1.92
CCDC39-204ENST00000476379 LINC01554Q52M75 96 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms