RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 FAM236CP0DP71 79 aa10.42□□□□□ -0.74
TVP23B-202ENST00000476139 VPS13DQ5THJ4 4388 aa10.42□□□□□ -0.74
TVP23B-202ENST00000476139 BCE1O60756 84 aa10.41□□□□□ -0.74
TVP23B-202ENST00000476139 KLKP1Q107X0 134 aa10.4□□□□□ -0.75
TVP23B-202ENST00000476139 DEFB116Q30KQ4 102 aa10.39□□□□□ -0.75
TVP23B-202ENST00000476139 Q8NBF4 154 aa10.38□□□□□ -0.75
TVP23B-202ENST00000476139 TGP01266 2768 aa10.38□□□□□ -0.75
TVP23B-202ENST00000476139 EPM2AB3EWF7 344 aa10.36□□□□□ -0.75
TVP23B-202ENST00000476139 LINC00476Q8WZB0 136 aa10.36□□□□□ -0.75
TVP23B-202ENST00000476139 FAM30AQ9NZY2 134 aa10.36□□□□□ -0.75
TVP23B-202ENST00000476139 DNAH2Q9P225 4427 aa10.36□□□□□ -0.75
TVP23B-202ENST00000476139 TMEM254Q8TBM7 123 aa10.36□□□□□ -0.75
TVP23B-202ENST00000476139 C4orf26Q17RF5 130 aa10.35□□□□□ -0.75
TVP23B-202ENST00000476139 OCR1Q9BZK8 76 aa10.34□□□□□ -0.75
TVP23B-202ENST00000476139 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.34□□□□□ -0.75
TVP23B-202ENST00000476139 SPRR4Q96PI1 79 aa10.33□□□□□ -0.76
TVP23B-202ENST00000476139 IGFL1Q6UW32 110 aa10.32□□□□□ -0.76
TVP23B-202ENST00000476139 K7EQZ3 153 aa10.32□□□□□ -0.76
TVP23B-202ENST00000476139 DSCR10P59022 87 aa10.32□□□□□ -0.76
TVP23B-202ENST00000476139 HECTD4Q9Y4D8 3996 aa10.31□□□□□ -0.76
TVP23B-202ENST00000476139 A0A087WTM6 91 aa10.31□□□□□ -0.76
TVP23B-202ENST00000476139 LINC00474Q9P2X8 69 aa10.3□□□□□ -0.76
TVP23B-202ENST00000476139 UBE2AP49459 152 aa10.29□□□□□ -0.76
TVP23B-202ENST00000476139 FBN3Q75N90 2809 aa10.29□□□□□ -0.76
TVP23B-202ENST00000476139 A0A1B0GW54 56 aa10.28□□□□□ -0.76
TVP23B-202ENST00000476139 Q5XG85 94 aa10.28□□□□□ -0.76
TVP23B-202ENST00000476139 A0A087WSZ3 146 aa10.27□□□□□ -0.76
TVP23B-202ENST00000476139 HRCT1Q6UXD1 115 aa10.27□□□□□ -0.76
TVP23B-202ENST00000476139 SPACA4Q8TDM5 124 aa10.27□□□□□ -0.77
TVP23B-202ENST00000476139 H0Y9J4 135 aa10.26□□□□□ -0.77
TVP23B-202ENST00000476139 Q6ZR54 194 aa10.25□□□□□ -0.77
TVP23B-202ENST00000476139 SERP1Q9Y6X1 66 aa10.25□□□□□ -0.77
TVP23B-202ENST00000476139 FRAS1Q86XX4 4008 aa10.25□□□□□ -0.77
TVP23B-202ENST00000476139 RPL37AP61513 92 aaKnown RBP10.24□□□□□ -0.77
TVP23B-202ENST00000476139 A0A0U1RQV1 116 aa10.24□□□□□ -0.77
TVP23B-202ENST00000476139 IGLV8-61A0A075B6I0 122 aa10.23□□□□□ -0.77
TVP23B-202ENST00000476139 RTL8CO15255 209 aa10.23□□□□□ -0.77
TVP23B-202ENST00000476139 PKIGQ9Y2B9 76 aa10.22□□□□□ -0.77
TVP23B-202ENST00000476139 WFDC13Q8IUB5 93 aa10.22□□□□□ -0.77
TVP23B-202ENST00000476139 NDUFC1O43677 76 aa10.21□□□□□ -0.77
TVP23B-202ENST00000476139 KRTAP13-1Q8IUC0 172 aa10.21□□□□□ -0.77
TVP23B-202ENST00000476139 SPRR1BP22528 89 aa10.2□□□□□ -0.78
TVP23B-202ENST00000476139 LY6G6CO95867 125 aa10.19□□□□□ -0.78
TVP23B-202ENST00000476139 DNAH8Q96JB1 4490 aa10.17□□□□□ -0.78
TVP23B-202ENST00000476139 DNAH17Q9UFH2 4485 aa10.16□□□□□ -0.78
TVP23B-202ENST00000476139 HCG22E2RYF7 251 aa10.16□□□□□ -0.78
TVP23B-202ENST00000476139 C1orf134Q5TEV5 83 aa10.16□□□□□ -0.78
TVP23B-202ENST00000476139 DNAH6Q9C0G6 4158 aa10.15□□□□□ -0.78
TVP23B-202ENST00000476139 C5orf47Q569G3 176 aa10.15□□□□□ -0.78
TVP23B-202ENST00000476139 FP248Q71RG6 208 aaPredicted RBP10.15□□□□□ -0.78
TVP23B-202ENST00000476139 FAM229BQ4G0N7 80 aa10.14□□□□□ -0.79
TVP23B-202ENST00000476139 PSORS1C2Q9UIG4 136 aa10.14□□□□□ -0.79
TVP23B-202ENST00000476139 IGLV5-52A0A0A0MRZ9 124 aa10.13□□□□□ -0.79
TVP23B-202ENST00000476139 PRR4Q16378 134 aa10.12□□□□□ -0.79
TVP23B-202ENST00000476139 IGLV9-49A0A0B4J1Y8 123 aa10.12□□□□□ -0.79
TVP23B-202ENST00000476139 ANAPC11Q9NYG5 84 aa10.1□□□□□ -0.79
TVP23B-202ENST00000476139 MPLKIPQ8TAP9 179 aa10.09□□□□□ -0.79
TVP23B-202ENST00000476139 PLAC8Q9NZF1 115 aa10.09□□□□□ -0.79
TVP23B-202ENST00000476139 SMIM26A0A096LP01 95 aa10.09□□□□□ -0.79
TVP23B-202ENST00000476139 HYDINQ4G0P3 5121 aa10.07□□□□□ -0.8
TVP23B-202ENST00000476139 ATP5EP56381 51 aaPredicted RBP10.06□□□□□ -0.8
TVP23B-202ENST00000476139 LCE6AA0A183 80 aa10.05□□□□□ -0.8
TVP23B-202ENST00000476139 LINC00472Q9H8W2 130 aa10.05□□□□□ -0.8
TVP23B-202ENST00000476139 KRTAP10-2P60368 255 aa10.04□□□□□ -0.8
TVP23B-202ENST00000476139 DNAH5Q8TE73 4624 aa10.03□□□□□ -0.8
TVP23B-202ENST00000476139 ZCCHC13Q8WW36 166 aaKnown RBP10.02□□□□□ -0.8
TVP23B-202ENST00000476139 DNAH11Q96DT5 4516 aa10.02□□□□□ -0.8
TVP23B-202ENST00000476139 ZNF861PO60384 105 aa10.02□□□□□ -0.81
TVP23B-202ENST00000476139 LINC00483Q53H64 154 aa10.02□□□□□ -0.81
TVP23B-202ENST00000476139 CASC2Q6XLA1 102 aa10.02□□□□□ -0.81
TVP23B-202ENST00000476139 LINC00208Q96KT6 92 aa10.01□□□□□ -0.81
TVP23B-202ENST00000476139 LINC00336Q6ZUF6 198 aa10.01□□□□□ -0.81
TVP23B-202ENST00000476139 PRR15Q8IV56 129 aa10□□□□□ -0.81
TVP23B-202ENST00000476139 WWC2-AS2Q96NR7 200 aa10□□□□□ -0.81
TVP23B-202ENST00000476139 KRTAP29-1A8MX34 341 aaPredicted RBP9.99□□□□□ -0.81
TVP23B-202ENST00000476139 MOBPQ13875 183 aa9.98□□□□□ -0.81
TVP23B-202ENST00000476139 ALMS1Q8TCU4 4167 aa9.97□□□□□ -0.81
TVP23B-202ENST00000476139 A8MWP4 228 aa9.97□□□□□ -0.81
TVP23B-202ENST00000476139 C1orf64Q8NEQ6 169 aa9.97□□□□□ -0.81
TVP23B-202ENST00000476139 CIRBP-AS1Q8TBR5 109 aa9.96□□□□□ -0.81
TVP23B-202ENST00000476139 MP68P56378 58 aa9.96□□□□□ -0.82
TVP23B-202ENST00000476139 ZNF706Q9Y5V0 76 aaPredicted RBP9.96□□□□□ -0.82
TVP23B-202ENST00000476139 IGLV7-43P04211 117 aa9.94□□□□□ -0.82
TVP23B-202ENST00000476139 Q96NJ1 140 aa9.94□□□□□ -0.82
TVP23B-202ENST00000476139 PKD1P98161 4303 aa9.94□□□□□ -0.82
TVP23B-202ENST00000476139 FAT2Q9NYQ8 4349 aa9.94□□□□□ -0.82
TVP23B-202ENST00000476139 H0Y9P7 68 aa9.93□□□□□ -0.82
TVP23B-202ENST00000476139 hDV103S1A0JD37 113 aa9.93□□□□□ -0.82
TVP23B-202ENST00000476139 LRP1BQ9NZR2 4599 aa9.92□□□□□ -0.82
TVP23B-202ENST00000476139 TRAV22A0A0B4J277 110 aa9.89□□□□□ -0.83
TVP23B-202ENST00000476139 MMP24-AS1A0A0U1RRL7 71 aa9.89□□□□□ -0.83
TVP23B-202ENST00000476139 KRTAP10-1P60331 282 aa9.88□□□□□ -0.83
TVP23B-202ENST00000476139 NDUFB1O75438 58 aa9.87□□□□□ -0.83
TVP23B-202ENST00000476139 BRK1Q8WUW1 75 aa9.86□□□□□ -0.83
TVP23B-202ENST00000476139 IGHV6-1A0A0B4J1U7 121 aa9.85□□□□□ -0.83
TVP23B-202ENST00000476139 NDUFS5O43920 106 aa9.82□□□□□ -0.84
TVP23B-202ENST00000476139 Q6ZSA8 131 aa9.81□□□□□ -0.84
TVP23B-202ENST00000476139 A0A087X002 238 aa9.81□□□□□ -0.84
TVP23B-202ENST00000476139 PSPHP1O15172 72 aa9.81□□□□□ -0.84
TVP23B-202ENST00000476139 SPINK6Q6UWN8 80 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms