RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 CNBPP62633 177 aaKnown RBP2.71□□□□□ -1.98
VPS13D-206ENST00000476045 Q8NDZ9 215 aa2.71□□□□□ -1.98
VPS13D-206ENST00000476045 ORMDL1Q9P0S3 153 aa2.71□□□□□ -1.98
VPS13D-206ENST00000476045 LRP1Q07954 4544 aaKnown RBP2.7□□□□□ -1.98
VPS13D-206ENST00000476045 SMR3BP02814 79 aaPredicted RBP2.7□□□□□ -1.98
VPS13D-206ENST00000476045 FUSP35637 526 aaKnown RBP eCLIP2.7□□□□□ -1.98
VPS13D-206ENST00000476045 CXCL5P42830 114 aa2.7□□□□□ -1.98
VPS13D-206ENST00000476045 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
VPS13D-206ENST00000476045 S100A7L2Q5SY68 101 aa2.7□□□□□ -1.98
VPS13D-206ENST00000476045 C9orf153Q5TBE3 101 aa2.7□□□□□ -1.98
VPS13D-206ENST00000476045 Q6JHZ5 121 aa2.7□□□□□ -1.98
VPS13D-206ENST00000476045 OBSCN-AS1Q96MR7 158 aa2.7□□□□□ -1.98
VPS13D-206ENST00000476045 IMUPQ9GZP8 106 aa2.7□□□□□ -1.98
VPS13D-206ENST00000476045 LINC00846Q9NV44 126 aa2.7□□□□□ -1.98
VPS13D-206ENST00000476045 A0A087WVE0 104 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 NDUFC2O95298 119 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 CCKP06307 115 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 RPL37AP61513 92 aaKnown RBP2.69□□□□□ -1.98
VPS13D-206ENST00000476045 HAMPP81172 84 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 RPL18AQ02543 176 aaKnown RBP2.69□□□□□ -1.98
VPS13D-206ENST00000476045 HIGD2BQ4VC39 106 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 C6orf99Q4VX62 202 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 ENHOQ6UWT2 76 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 C3orf22Q8N5N4 141 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 C9orf163Q8N9P6 203 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 CIRBP-AS1Q8TBR5 109 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 LINC00167Q96N53 147 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 TMEM126AQ9H061 195 aa2.69□□□□□ -1.98
VPS13D-206ENST00000476045 A0A1B0GX51 115 aa2.68□□□□□ -1.98
VPS13D-206ENST00000476045 HIST1H4AP62805 103 aaKnown RBP2.68□□□□□ -1.98
VPS13D-206ENST00000476045 COX17Q14061 63 aa2.68□□□□□ -1.98
VPS13D-206ENST00000476045 LINC00575Q6W349 94 aa2.68□□□□□ -1.98
VPS13D-206ENST00000476045 SMIM20Q8N5G0 67 aa2.68□□□□□ -1.98
VPS13D-206ENST00000476045 C7orf33Q8WU49 177 aa2.68□□□□□ -1.98
VPS13D-206ENST00000476045 XAGE1AQ9HD64 81 aa2.68□□□□□ -1.98
VPS13D-206ENST00000476045 LINC00474Q9P2X8 69 aa2.68□□□□□ -1.98
VPS13D-206ENST00000476045 C6orf48Q9UBA6 75 aa2.68□□□□□ -1.98
VPS13D-206ENST00000476045 TRBV10-3A0A0K0K1G6 114 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 hADV29S1A0JD25 119 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 JMJD7-PLA2G4BH0Y9G9 81 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 ATOX1O00244 68 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 COX7CP15954 63 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 KRTAP10-4P60372 401 aaPredicted RBP2.67□□□□□ -1.98
VPS13D-206ENST00000476045 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 Q6ZRU5 148 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 Q6ZVQ6 151 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 FAM19A1Q7Z5A9 133 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 SPACA4Q8TDM5 124 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 C2orf48Q96LS8 159 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 LAMTOR3Q9UHA4 124 aa2.67□□□□□ -1.98
VPS13D-206ENST00000476045 TRAV23DV6A0A075B6W5 121 aa2.66□□□□□ -1.98
VPS13D-206ENST00000476045 GVQW2A0A096LPI5 108 aaPredicted RBP2.66□□□□□ -1.98
VPS13D-206ENST00000476045 TMEM256-PLSCR3K7ERE1 68 aa2.66□□□□□ -1.98
VPS13D-206ENST00000476045 UQCRQO14949 82 aa2.66□□□□□ -1.98
VPS13D-206ENST00000476045 COX7BP24311 80 aa2.66□□□□□ -1.98
VPS13D-206ENST00000476045 KRTAP26-1Q6PEX3 210 aa2.66□□□□□ -1.98
VPS13D-206ENST00000476045 DIRC1Q969H9 104 aa2.66□□□□□ -1.98
VPS13D-206ENST00000476045 CAMK2N2Q96S95 79 aa2.66□□□□□ -1.98
VPS13D-206ENST00000476045 TNXBP22105 4242 aa2.66□□□□□ -1.98
VPS13D-206ENST00000476045 IGLV6-57P01721 117 aa2.65□□□□□ -1.99
VPS13D-206ENST00000476045 RBM3P98179 157 aaKnown RBP2.65□□□□□ -1.99
VPS13D-206ENST00000476045 Q6ZQT0 140 aa2.65□□□□□ -1.99
VPS13D-206ENST00000476045 Q6ZQY7 126 aa2.65□□□□□ -1.99
VPS13D-206ENST00000476045 C15orf56Q8N910 161 aa2.65□□□□□ -1.99
VPS13D-206ENST00000476045 UBL5Q9BZL1 73 aa2.65□□□□□ -1.99
VPS13D-206ENST00000476045 PLAC8Q9NZF1 115 aa2.65□□□□□ -1.99
VPS13D-206ENST00000476045 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
VPS13D-206ENST00000476045 M0R378 163 aa2.64□□□□□ -1.99
VPS13D-206ENST00000476045 SERP2Q8N6R1 65 aa2.64□□□□□ -1.99
VPS13D-206ENST00000476045 CYSTM1Q9H1C7 97 aa2.64□□□□□ -1.99
VPS13D-206ENST00000476045 LRP2P98164 4655 aa2.63□□□□□ -1.99
VPS13D-206ENST00000476045 LOC110117498A0A087WWA1 95 aa2.63□□□□□ -1.99
VPS13D-206ENST00000476045 ZNF73O43830 326 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-206ENST00000476045 CRYGAP11844 174 aa2.63□□□□□ -1.99
VPS13D-206ENST00000476045 ATP5EP2Q5VTU8 51 aa2.63□□□□□ -1.99
VPS13D-206ENST00000476045 REG3GQ6UW15 175 aa2.63□□□□□ -1.99
VPS13D-206ENST00000476045 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.63□□□□□ -1.99
VPS13D-206ENST00000476045 DSCR8Q96T75 97 aa2.63□□□□□ -1.99
VPS13D-206ENST00000476045 LOC107984640A0A0U1RRK4 108 aa2.62□□□□□ -1.99
VPS13D-206ENST00000476045 LINC01547P58512 204 aaPredicted RBP2.62□□□□□ -1.99
VPS13D-206ENST00000476045 ELOF1P60002 83 aaKnown RBP2.62□□□□□ -1.99
VPS13D-206ENST00000476045 KRTAP10-12P60413 245 aa2.62□□□□□ -1.99
VPS13D-206ENST00000476045 SYCNQ0VAF6 134 aa2.62□□□□□ -1.99
VPS13D-206ENST00000476045 DEFB105AQ8NG35 78 aa2.62□□□□□ -1.99
VPS13D-206ENST00000476045 IGKV2-24A0A0C4DH68 120 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 NDUFC2-KCTD14E9PQ53 114 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 H3BQ85 93 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 PANO1I0J062 215 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 CHTF8P0CG12 524 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 SPINK6Q6UWN8 80 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 Q6ZRP5 223 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 C20orf197Q8N268 126 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 NKAPP1Q8N9T2 125 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 DPH3Q96FX2 82 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 PRAC1Q96KF2 57 aa2.61□□□□□ -1.99
VPS13D-206ENST00000476045 A0A096LNI7 61 aa2.6□□□□□ -1.99
VPS13D-206ENST00000476045 TRBV7-6A0A0J9YX20 115 aa2.6□□□□□ -1.99
VPS13D-206ENST00000476045 TRBV7-4A0A0J9YYF1 115 aa2.6□□□□□ -1.99
VPS13D-206ENST00000476045 J3KT08 172 aa2.6□□□□□ -1.99
VPS13D-206ENST00000476045 MT1HL1P0DM35 61 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms