RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 H3BMG7 143 aa4.4□□□□□ -1.71
SHQ1-207ENST00000475558 LINC01620Q4KN68 170 aa4.4□□□□□ -1.71
SHQ1-207ENST00000475558 ORMDL1Q9P0S3 153 aa4.4□□□□□ -1.71
SHQ1-207ENST00000475558 DNAH8Q96JB1 4490 aa4.4□□□□□ -1.71
SHQ1-207ENST00000475558 RPL37AP8A6NKH3 93 aa4.39□□□□□ -1.71
SHQ1-207ENST00000475558 B5MCH6 92 aa4.39□□□□□ -1.71
SHQ1-207ENST00000475558 BAALC-AS2P0C853 105 aa4.39□□□□□ -1.71
SHQ1-207ENST00000475558 CHTF8P0CG12 524 aa4.39□□□□□ -1.71
SHQ1-207ENST00000475558 HAMPP81172 84 aa4.39□□□□□ -1.71
SHQ1-207ENST00000475558 Q6ZSA8 131 aa4.39□□□□□ -1.71
SHQ1-207ENST00000475558 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
SHQ1-207ENST00000475558 ANKRD29Q8N6D5 301 aa4.39□□□□□ -1.71
SHQ1-207ENST00000475558 NAA38Q9BRA0 125 aaKnown RBP4.39□□□□□ -1.71
SHQ1-207ENST00000475558 C9JAW5 83 aa4.38□□□□□ -1.71
SHQ1-207ENST00000475558 KRTAP4-16G5E9R7 235 aaPredicted RBP4.38□□□□□ -1.71
SHQ1-207ENST00000475558 J3QR89 54 aa4.38□□□□□ -1.71
SHQ1-207ENST00000475558 BCE1O60756 84 aa4.38□□□□□ -1.71
SHQ1-207ENST00000475558 Q6ZRX8 168 aa4.38□□□□□ -1.71
SHQ1-207ENST00000475558 PHF5AQ7RTV0 110 aaKnown RBP4.38□□□□□ -1.71
SHQ1-207ENST00000475558 JMJD7-PLA2G4BH0Y9G9 81 aa4.37□□□□□ -1.71
SHQ1-207ENST00000475558 UBE2AP49459 152 aa4.37□□□□□ -1.71
SHQ1-207ENST00000475558 CLEC2BQ92478 149 aa4.37□□□□□ -1.71
SHQ1-207ENST00000475558 OXTP01178 125 aa4.36□□□□□ -1.71
SHQ1-207ENST00000475558 PDE6GP18545 87 aa4.36□□□□□ -1.71
SHQ1-207ENST00000475558 FAM19A1Q7Z5A9 133 aa4.36□□□□□ -1.71
SHQ1-207ENST00000475558 CIRBP-AS1Q8TBR5 109 aa4.36□□□□□ -1.71
SHQ1-207ENST00000475558 FAM30AQ9NZY2 134 aa4.36□□□□□ -1.71
SHQ1-207ENST00000475558 ZNF706Q9Y5V0 76 aaPredicted RBP4.36□□□□□ -1.71
SHQ1-207ENST00000475558 ZNF861PO60384 105 aa4.35□□□□□ -1.71
SHQ1-207ENST00000475558 FAM218AQ96MZ4 157 aa4.35□□□□□ -1.71
SHQ1-207ENST00000475558 PRO0461Q9UI25 63 aa4.35□□□□□ -1.71
SHQ1-207ENST00000475558 TEX49A0A1B0GTD5 131 aa4.34□□□□□ -1.71
SHQ1-207ENST00000475558 PANO1I0J062 215 aa4.34□□□□□ -1.71
SHQ1-207ENST00000475558 C1orf137Q5JT78 98 aa4.34□□□□□ -1.71
SHQ1-207ENST00000475558 Q6ZQY7 126 aa4.34□□□□□ -1.71
SHQ1-207ENST00000475558 SCXQ7RTU7 201 aa4.34□□□□□ -1.71
SHQ1-207ENST00000475558 TEN1Q86WV5 123 aa4.34□□□□□ -1.71
SHQ1-207ENST00000475558 SMCR5Q8TEV8 140 aa4.34□□□□□ -1.71
SHQ1-207ENST00000475558 LRP1Q07954 4544 aaKnown RBP4.33□□□□□ -1.72
SHQ1-207ENST00000475558 A0A1B0GW54 56 aa4.33□□□□□ -1.72
SHQ1-207ENST00000475558 PSORS1C2Q9UIG4 136 aa4.33□□□□□ -1.72
SHQ1-207ENST00000475558 FAT3Q8TDW7 4589 aa4.33□□□□□ -1.72
SHQ1-207ENST00000475558 IGLV5-48A0A075B6I7 105 aa4.32□□□□□ -1.72
SHQ1-207ENST00000475558 IGLV7-43P04211 117 aa4.32□□□□□ -1.72
SHQ1-207ENST00000475558 RBM3P98179 157 aaKnown RBP4.32□□□□□ -1.72
SHQ1-207ENST00000475558 LAMTOR3Q9UHA4 124 aa4.32□□□□□ -1.72
SHQ1-207ENST00000475558 K7ERU9 68 aa4.31□□□□□ -1.72
SHQ1-207ENST00000475558 ACYP1P07311 99 aa4.31□□□□□ -1.72
SHQ1-207ENST00000475558 SPRR1BP22528 89 aa4.31□□□□□ -1.72
SHQ1-207ENST00000475558 NDUFV3P56181 108 aaKnown RBP4.31□□□□□ -1.72
SHQ1-207ENST00000475558 RPL37AP61513 92 aaKnown RBP4.31□□□□□ -1.72
SHQ1-207ENST00000475558 ETDBQ3ZM63 59 aa4.31□□□□□ -1.72
SHQ1-207ENST00000475558 KRTAP13-1Q8IUC0 172 aa4.31□□□□□ -1.72
SHQ1-207ENST00000475558 DSCR8Q96T75 97 aa4.31□□□□□ -1.72
SHQ1-207ENST00000475558 Q9BRP9 147 aa4.31□□□□□ -1.72
SHQ1-207ENST00000475558 HIGD2AQ9BW72 106 aa4.31□□□□□ -1.72
SHQ1-207ENST00000475558 PKHD1L1Q86WI1 4243 aa4.31□□□□□ -1.72
SHQ1-207ENST00000475558 F8WEM9 126 aa4.3□□□□□ -1.72
SHQ1-207ENST00000475558 OBSCN-AS1Q96MR7 158 aa4.3□□□□□ -1.72
SHQ1-207ENST00000475558 KRTAP10-4P60372 401 aaPredicted RBP4.29□□□□□ -1.72
SHQ1-207ENST00000475558 PRLHP81277 87 aa4.29□□□□□ -1.72
SHQ1-207ENST00000475558 Q6JHZ5 121 aa4.29□□□□□ -1.72
SHQ1-207ENST00000475558 SPINK6Q6UWN8 80 aa4.29□□□□□ -1.72
SHQ1-207ENST00000475558 Q8N377 158 aa4.29□□□□□ -1.72
SHQ1-207ENST00000475558 DEFB105AQ8NG35 78 aa4.29□□□□□ -1.72
SHQ1-207ENST00000475558 LOC110117498A0A087WWA1 95 aa4.27□□□□□ -1.73
SHQ1-207ENST00000475558 LINC00483Q53H64 154 aa4.27□□□□□ -1.73
SHQ1-207ENST00000475558 GAGE2AQ6NT46 116 aa4.27□□□□□ -1.73
SHQ1-207ENST00000475558 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
SHQ1-207ENST00000475558 RNF213Q63HN8 5207 aa4.26□□□□□ -1.73
SHQ1-207ENST00000475558 IGLV8-61A0A075B6I0 122 aa4.26□□□□□ -1.73
SHQ1-207ENST00000475558 FAM240AA0A1B0GVK7 77 aa4.26□□□□□ -1.73
SHQ1-207ENST00000475558 ERC2-IT1O76042 136 aa4.26□□□□□ -1.73
SHQ1-207ENST00000475558 CCKP06307 115 aa4.26□□□□□ -1.73
SHQ1-207ENST00000475558 LINC01547P58512 204 aaPredicted RBP4.26□□□□□ -1.73
SHQ1-207ENST00000475558 FAM229BQ4G0N7 80 aa4.26□□□□□ -1.73
SHQ1-207ENST00000475558 SSBP3-AS1Q7Z2R9 100 aa4.26□□□□□ -1.73
SHQ1-207ENST00000475558 SPRR4Q96PI1 79 aa4.26□□□□□ -1.73
SHQ1-207ENST00000475558 MTURNQ8N3F0 131 aa4.25□□□□□ -1.73
SHQ1-207ENST00000475558 ST20-AS1Q8NBB2 130 aa4.24□□□□□ -1.73
SHQ1-207ENST00000475558 KRTAP3-1Q9BYR8 98 aa4.24□□□□□ -1.73
SHQ1-207ENST00000475558 TNXBP22105 4242 aa4.24□□□□□ -1.73
SHQ1-207ENST00000475558 TRBV7-4A0A0J9YYF1 115 aa4.23□□□□□ -1.73
SHQ1-207ENST00000475558 SMIM29Q86T20 159 aa4.23□□□□□ -1.73
SHQ1-207ENST00000475558 LRP2P98164 4655 aa4.22□□□□□ -1.73
SHQ1-207ENST00000475558 MT1HL1P0DM35 61 aa4.22□□□□□ -1.73
SHQ1-207ENST00000475558 CRYGAP11844 174 aa4.22□□□□□ -1.73
SHQ1-207ENST00000475558 Q6Q795 121 aa4.22□□□□□ -1.73
SHQ1-207ENST00000475558 Q6ZQT0 140 aa4.22□□□□□ -1.73
SHQ1-207ENST00000475558 C14orf132Q9NPU4 83 aa4.22□□□□□ -1.73
SHQ1-207ENST00000475558 CD164Q04900 197 aa4.21□□□□□ -1.74
SHQ1-207ENST00000475558 SEC61GP60059 68 aa4.2□□□□□ -1.74
SHQ1-207ENST00000475558 SPAG11AQ6PDA7 123 aa4.2□□□□□ -1.74
SHQ1-207ENST00000475558 Q8NBF4 154 aa4.2□□□□□ -1.74
SHQ1-207ENST00000475558 UBL5Q9BZL1 73 aa4.2□□□□□ -1.74
SHQ1-207ENST00000475558 NREPQ16612 68 aa4.18□□□□□ -1.74
SHQ1-207ENST00000475558 C9orf153Q5TBE3 101 aa4.18□□□□□ -1.74
SHQ1-207ENST00000475558 IGFL1Q6UW32 110 aa4.18□□□□□ -1.74
SHQ1-207ENST00000475558 LINC00643Q86TS7 51 aa4.18□□□□□ -1.74
SHQ1-207ENST00000475558 SS18L2Q9UHA2 77 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms