RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
HDAC3-207ENST00000475549 KRTDAPP60985 99 aa3.76□□□□□ -1.81
HDAC3-207ENST00000475549 MUSTN1Q8IVN3 82 aa3.76□□□□□ -1.81
HDAC3-207ENST00000475549 AKR1D1P51857 326 aa3.75□□□□□ -1.81
HDAC3-207ENST00000475549 SCGB1D4Q6XE38 83 aa3.75□□□□□ -1.81
HDAC3-207ENST00000475549 ATOH7Q8N100 152 aa3.75□□□□□ -1.81
HDAC3-207ENST00000475549 A6NDN8 102 aa3.74□□□□□ -1.81
HDAC3-207ENST00000475549 SMIM11BQ8TCY0 68 aa3.74□□□□□ -1.81
HDAC3-207ENST00000475549 A0A1B0GWB2 263 aa3.73□□□□□ -1.81
HDAC3-207ENST00000475549 IFITM1P13164 125 aa3.73□□□□□ -1.81
HDAC3-207ENST00000475549 KRTAP10-6P60371 365 aaPredicted RBP3.73□□□□□ -1.81
HDAC3-207ENST00000475549 RPL37P61927 97 aaKnown RBP3.72□□□□□ -1.81
HDAC3-207ENST00000475549 Q6ZVH6 145 aa3.72□□□□□ -1.81
HDAC3-207ENST00000475549 A4D1N5 150 aa3.71□□□□□ -1.82
HDAC3-207ENST00000475549 TRIAP1O43715 76 aa3.71□□□□□ -1.82
HDAC3-207ENST00000475549 TRAV13-2A0A0B4J235 113 aa3.7□□□□□ -1.82
HDAC3-207ENST00000475549 KRTAP23-1A1A580 65 aa3.7□□□□□ -1.82
HDAC3-207ENST00000475549 LCE1DQ5T752 114 aa3.7□□□□□ -1.82
HDAC3-207ENST00000475549 LINC00575Q6W349 94 aa3.7□□□□□ -1.82
HDAC3-207ENST00000475549 COPS9Q8WXC6 57 aa3.7□□□□□ -1.82
HDAC3-207ENST00000475549 C20orf202A1L168 122 aa3.69□□□□□ -1.82
HDAC3-207ENST00000475549 CFC1BP0CG36 223 aa3.69□□□□□ -1.82
HDAC3-207ENST00000475549 FLGP20930 4061 aaPredicted RBP3.68□□□□□ -1.82
HDAC3-207ENST00000475549 IGFL1Q6UW32 110 aa3.68□□□□□ -1.82
HDAC3-207ENST00000475549 Q6ZQY7 126 aa3.68□□□□□ -1.82
HDAC3-207ENST00000475549 TRBV7-7A0A0K0K1E9 115 aa3.67□□□□□ -1.82
HDAC3-207ENST00000475549 hADV29S1A0JD25 119 aa3.67□□□□□ -1.82
HDAC3-207ENST00000475549 TCL1BO95988 128 aa3.67□□□□□ -1.82
HDAC3-207ENST00000475549 OCIAD2Q56VL3 154 aa3.67□□□□□ -1.82
HDAC3-207ENST00000475549 HIST3H2BBQ8N257 126 aa3.67□□□□□ -1.82
HDAC3-207ENST00000475549 HIST1H2BLQ99880 126 aa3.67□□□□□ -1.82
HDAC3-207ENST00000475549 NHP2Q9NX24 153 aaKnown RBP3.67□□□□□ -1.82
HDAC3-207ENST00000475549 SNRPEP62304 92 aaKnown RBP3.66□□□□□ -1.82
HDAC3-207ENST00000475549 KRTAP4-7Q9BYR0 210 aa3.66□□□□□ -1.82
HDAC3-207ENST00000475549 M0R2T5 61 aa3.65□□□□□ -1.83
HDAC3-207ENST00000475549 VAMP3Q15836 100 aa3.65□□□□□ -1.83
HDAC3-207ENST00000475549 Q6JHZ5 121 aa3.65□□□□□ -1.83
HDAC3-207ENST00000475549 CLEC2BQ92478 149 aa3.65□□□□□ -1.83
HDAC3-207ENST00000475549 OBSCN-AS1Q96MR7 158 aa3.65□□□□□ -1.83
HDAC3-207ENST00000475549 F8WEM9 126 aa3.64□□□□□ -1.83
HDAC3-207ENST00000475549 H3BUT2 72 aa3.64□□□□□ -1.83
HDAC3-207ENST00000475549 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.64□□□□□ -1.83
HDAC3-207ENST00000475549 COX6B2Q6YFQ2 88 aa3.64□□□□□ -1.83
HDAC3-207ENST00000475549 C12orf57Q99622 126 aa3.64□□□□□ -1.83
HDAC3-207ENST00000475549 Q75L30 129 aa3.63□□□□□ -1.83
HDAC3-207ENST00000475549 FAM218AQ96MZ4 157 aa3.62□□□□□ -1.83
HDAC3-207ENST00000475549 CFC1P0CG37 223 aa3.61□□□□□ -1.83
HDAC3-207ENST00000475549 ATP11AUNQ6ZP68 121 aa3.61□□□□□ -1.83
HDAC3-207ENST00000475549 SNHG12Q9BXW3 62 aa3.61□□□□□ -1.83
HDAC3-207ENST00000475549 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
HDAC3-207ENST00000475549 HSBP1L1C9JCN9 74 aa3.6□□□□□ -1.83
HDAC3-207ENST00000475549 COX8AP10176 69 aa3.6□□□□□ -1.83
HDAC3-207ENST00000475549 S100A2P29034 98 aa3.6□□□□□ -1.83
HDAC3-207ENST00000475549 BVES-AS1Q5T3Y7 98 aa3.6□□□□□ -1.83
HDAC3-207ENST00000475549 Q6Q795 121 aa3.6□□□□□ -1.83
HDAC3-207ENST00000475549 PPDPFLQ8WWR9 84 aa3.6□□□□□ -1.83
HDAC3-207ENST00000475549 Q96NJ1 140 aa3.6□□□□□ -1.83
HDAC3-207ENST00000475549 HIST1H4GQ99525 98 aa3.6□□□□□ -1.83
HDAC3-207ENST00000475549 KRTAP16-1A8MUX0 517 aa3.59□□□□□ -1.83
HDAC3-207ENST00000475549 LST1O00453 97 aa3.59□□□□□ -1.83
HDAC3-207ENST00000475549 DLEU1O43261 78 aa3.59□□□□□ -1.83
HDAC3-207ENST00000475549 SCGB1D1O95968 90 aa3.59□□□□□ -1.83
HDAC3-207ENST00000475549 PCP4P48539 62 aa3.59□□□□□ -1.83
HDAC3-207ENST00000475549 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
HDAC3-207ENST00000475549 C20orf166-AS1Q96NR2 134 aa3.59□□□□□ -1.83
HDAC3-207ENST00000475549 A8MUU9 505 aa3.58□□□□□ -1.84
HDAC3-207ENST00000475549 NDUFV3P56181 108 aaKnown RBP3.58□□□□□ -1.84
HDAC3-207ENST00000475549 C14orf144Q96I85 54 aa3.58□□□□□ -1.84
HDAC3-207ENST00000475549 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
HDAC3-207ENST00000475549 SSPOA2VEC9 5147 aa3.57□□□□□ -1.84
HDAC3-207ENST00000475549 USH2AO75445 5202 aa3.57□□□□□ -1.84
HDAC3-207ENST00000475549 A0A087WSZ3 146 aa3.57□□□□□ -1.84
HDAC3-207ENST00000475549 C2orf91Q6ZV80 131 aa3.57□□□□□ -1.84
HDAC3-207ENST00000475549 TEN1Q86WV5 123 aa3.57□□□□□ -1.84
HDAC3-207ENST00000475549 A0A1W2PNM2 257 aa3.56□□□□□ -1.84
HDAC3-207ENST00000475549 H0YGX0 51 aa3.56□□□□□ -1.84
HDAC3-207ENST00000475549 S100A6P06703 90 aa3.56□□□□□ -1.84
HDAC3-207ENST00000475549 DSCR10P59022 87 aa3.56□□□□□ -1.84
HDAC3-207ENST00000475549 A0A0B4J2C4 111 aa3.55□□□□□ -1.84
HDAC3-207ENST00000475549 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
HDAC3-207ENST00000475549 H3BMG7 143 aa3.55□□□□□ -1.84
HDAC3-207ENST00000475549 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
HDAC3-207ENST00000475549 RAB37Q96AX2 223 aa3.55□□□□□ -1.84
HDAC3-207ENST00000475549 KRTAP3-1Q9BYR8 98 aa3.55□□□□□ -1.84
HDAC3-207ENST00000475549 HIGD1BQ9P298 99 aa3.55□□□□□ -1.84
HDAC3-207ENST00000475549 SS18L2Q9UHA2 77 aa3.54□□□□□ -1.84
HDAC3-207ENST00000475549 PAM16Q9Y3D7 125 aa3.54□□□□□ -1.84
HDAC3-207ENST00000475549 MT2AP02795 61 aa3.53□□□□□ -1.84
HDAC3-207ENST00000475549 FABP2P12104 132 aa3.53□□□□□ -1.84
HDAC3-207ENST00000475549 SPATA45Q537H7 98 aa3.53□□□□□ -1.84
HDAC3-207ENST00000475549 CEND1Q8N111 149 aa3.53□□□□□ -1.84
HDAC3-207ENST00000475549 S100A1P23297 94 aa3.52□□□□□ -1.85
HDAC3-207ENST00000475549 FXYD2P54710 66 aa3.52□□□□□ -1.85
HDAC3-207ENST00000475549 MPLKIPQ8TAP9 179 aa3.52□□□□□ -1.85
HDAC3-207ENST00000475549 PRO1854Q9UHT4 67 aa3.52□□□□□ -1.85
HDAC3-207ENST00000475549 A0A1B0GX51 115 aa3.51□□□□□ -1.85
HDAC3-207ENST00000475549 MT1FP04733 61 aa3.51□□□□□ -1.85
HDAC3-207ENST00000475549 HRES1P13985 223 aa3.51□□□□□ -1.85
HDAC3-207ENST00000475549 LINC00313P59037 77 aa3.51□□□□□ -1.85
HDAC3-207ENST00000475549 DEFB116Q30KQ4 102 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms