RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 PKHD1L1Q86WI1 4243 aa4.09□□□□□ -1.76
ATG4A-207ENST00000474825 IGLV5-48A0A075B6I7 105 aa4.08□□□□□ -1.76
ATG4A-207ENST00000474825 ETDCA0A1B0GVM5 59 aa4.08□□□□□ -1.76
ATG4A-207ENST00000474825 BCE1O60756 84 aa4.08□□□□□ -1.76
ATG4A-207ENST00000474825 DNAL4O96015 105 aa4.08□□□□□ -1.76
ATG4A-207ENST00000474825 BAALC-AS2P0C853 105 aa4.08□□□□□ -1.76
ATG4A-207ENST00000474825 TEN1Q86WV5 123 aa4.08□□□□□ -1.76
ATG4A-207ENST00000474825 SMCR5Q8TEV8 140 aa4.08□□□□□ -1.76
ATG4A-207ENST00000474825 PPDPFLQ8WWR9 84 aa4.08□□□□□ -1.76
ATG4A-207ENST00000474825 OBSCN-AS1Q96MR7 158 aa4.08□□□□□ -1.76
ATG4A-207ENST00000474825 TMEM256-PLSCR3K7ERE1 68 aa4.07□□□□□ -1.76
ATG4A-207ENST00000474825 SCGB1A1P11684 91 aa4.07□□□□□ -1.76
ATG4A-207ENST00000474825 LINC01547P58512 204 aaPredicted RBP4.07□□□□□ -1.76
ATG4A-207ENST00000474825 UBE2BP63146 152 aa4.07□□□□□ -1.76
ATG4A-207ENST00000474825 ETDBQ3ZM63 59 aa4.07□□□□□ -1.76
ATG4A-207ENST00000474825 Q6ZQY7 126 aa4.07□□□□□ -1.76
ATG4A-207ENST00000474825 SCXQ7RTU7 201 aa4.07□□□□□ -1.76
ATG4A-207ENST00000474825 MTURNQ8N3F0 131 aa4.07□□□□□ -1.76
ATG4A-207ENST00000474825 DPH3Q96FX2 82 aa4.07□□□□□ -1.76
ATG4A-207ENST00000474825 KRTAP3-1Q9BYR8 98 aa4.07□□□□□ -1.76
ATG4A-207ENST00000474825 ORMDL1Q9P0S3 153 aa4.07□□□□□ -1.76
ATG4A-207ENST00000474825 ERC2-IT1O76042 136 aa4.06□□□□□ -1.76
ATG4A-207ENST00000474825 PSORS1C2Q9UIG4 136 aa4.06□□□□□ -1.76
ATG4A-207ENST00000474825 SPRR1BP22528 89 aa4.05□□□□□ -1.76
ATG4A-207ENST00000474825 FAM19A1Q7Z5A9 133 aa4.05□□□□□ -1.76
ATG4A-207ENST00000474825 Q8N377 158 aa4.05□□□□□ -1.76
ATG4A-207ENST00000474825 A0A1B0GV72 72 aa4.04□□□□□ -1.76
ATG4A-207ENST00000474825 XGP55808 180 aa4.04□□□□□ -1.76
ATG4A-207ENST00000474825 JMJD7-PLA2G4BH0Y9G9 81 aa4.03□□□□□ -1.76
ATG4A-207ENST00000474825 ZNF861PO60384 105 aa4.03□□□□□ -1.76
ATG4A-207ENST00000474825 CDK2AP2O75956 126 aa4.03□□□□□ -1.76
ATG4A-207ENST00000474825 PRLHP81277 87 aa4.03□□□□□ -1.76
ATG4A-207ENST00000474825 SMIM29Q86T20 159 aa4.03□□□□□ -1.76
ATG4A-207ENST00000474825 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
ATG4A-207ENST00000474825 TEX49A0A1B0GTD5 131 aa4.02□□□□□ -1.77
ATG4A-207ENST00000474825 IGLV7-43P04211 117 aa4.02□□□□□ -1.77
ATG4A-207ENST00000474825 UBE2AP49459 152 aa4.02□□□□□ -1.77
ATG4A-207ENST00000474825 LINC00483Q53H64 154 aa4.02□□□□□ -1.77
ATG4A-207ENST00000474825 ST20-AS1Q8NBB2 130 aa4.02□□□□□ -1.77
ATG4A-207ENST00000474825 KIAA1109Q2LD37 5005 aa4.02□□□□□ -1.77
ATG4A-207ENST00000474825 LOC110117498A0A087WWA1 95 aa4.01□□□□□ -1.77
ATG4A-207ENST00000474825 NDUFV3P56181 108 aaKnown RBP4.01□□□□□ -1.77
ATG4A-207ENST00000474825 C1orf137Q5JT78 98 aa4.01□□□□□ -1.77
ATG4A-207ENST00000474825 Q8N1X5 172 aa4.01□□□□□ -1.77
ATG4A-207ENST00000474825 HIGD2AQ9BW72 106 aa4.01□□□□□ -1.77
ATG4A-207ENST00000474825 IGLV8-61A0A075B6I0 122 aa4□□□□□ -1.77
ATG4A-207ENST00000474825 TRBV7-4A0A0J9YYF1 115 aa4□□□□□ -1.77
ATG4A-207ENST00000474825 FAM240AA0A1B0GVK7 77 aa3.99□□□□□ -1.77
ATG4A-207ENST00000474825 J3QR89 54 aa3.99□□□□□ -1.77
ATG4A-207ENST00000474825 PDE6GP18545 87 aa3.99□□□□□ -1.77
ATG4A-207ENST00000474825 KRTAP10-4P60372 401 aaPredicted RBP3.99□□□□□ -1.77
ATG4A-207ENST00000474825 RBM3P98179 157 aaKnown RBP3.99□□□□□ -1.77
ATG4A-207ENST00000474825 SPRR4Q96PI1 79 aa3.99□□□□□ -1.77
ATG4A-207ENST00000474825 SIGMAR1Q99720 223 aa3.99□□□□□ -1.77
ATG4A-207ENST00000474825 CCKP06307 115 aa3.98□□□□□ -1.77
ATG4A-207ENST00000474825 HAMPP81172 84 aa3.98□□□□□ -1.77
ATG4A-207ENST00000474825 Q6ZQT0 140 aa3.98□□□□□ -1.77
ATG4A-207ENST00000474825 DEFB105AQ8NG35 78 aa3.98□□□□□ -1.77
ATG4A-207ENST00000474825 LAMTOR3Q9UHA4 124 aa3.98□□□□□ -1.77
ATG4A-207ENST00000474825 ZNF706Q9Y5V0 76 aaPredicted RBP3.98□□□□□ -1.77
ATG4A-207ENST00000474825 A0A1B0GW54 56 aa3.97□□□□□ -1.77
ATG4A-207ENST00000474825 ACYP1P07311 99 aa3.97□□□□□ -1.77
ATG4A-207ENST00000474825 C14orf132Q9NPU4 83 aa3.97□□□□□ -1.77
ATG4A-207ENST00000474825 FAT3Q8TDW7 4589 aa3.97□□□□□ -1.77
ATG4A-207ENST00000474825 RPL37AP61513 92 aaKnown RBP3.96□□□□□ -1.78
ATG4A-207ENST00000474825 DSCR8Q96T75 97 aa3.96□□□□□ -1.78
ATG4A-207ENST00000474825 TNXBP22105 4242 aa3.95□□□□□ -1.78
ATG4A-207ENST00000474825 HERC2O95714 4834 aa3.95□□□□□ -1.78
ATG4A-207ENST00000474825 PLA2G1BP04054 148 aaKnown RBP3.95□□□□□ -1.78
ATG4A-207ENST00000474825 GAGE2AQ6NT46 116 aa3.95□□□□□ -1.78
ATG4A-207ENST00000474825 SPINK6Q6UWN8 80 aa3.95□□□□□ -1.78
ATG4A-207ENST00000474825 C3orf22Q8N5N4 141 aa3.95□□□□□ -1.78
ATG4A-207ENST00000474825 KRTAP1-4P0C5Y4 121 aa3.94□□□□□ -1.78
ATG4A-207ENST00000474825 FAM229BQ4G0N7 80 aa3.94□□□□□ -1.78
ATG4A-207ENST00000474825 Q6JHZ5 121 aa3.94□□□□□ -1.78
ATG4A-207ENST00000474825 Q6Q795 121 aa3.94□□□□□ -1.78
ATG4A-207ENST00000474825 CDIP1Q9H305 208 aa3.94□□□□□ -1.78
ATG4A-207ENST00000474825 A0A1W2PNM2 257 aa3.93□□□□□ -1.78
ATG4A-207ENST00000474825 IGFL1Q6UW32 110 aa3.93□□□□□ -1.78
ATG4A-207ENST00000474825 Q8NBF4 154 aa3.93□□□□□ -1.78
ATG4A-207ENST00000474825 F8WEM9 126 aa3.92□□□□□ -1.78
ATG4A-207ENST00000474825 SMR3BP02814 79 aaPredicted RBP3.92□□□□□ -1.78
ATG4A-207ENST00000474825 CRYGAP11844 174 aa3.92□□□□□ -1.78
ATG4A-207ENST00000474825 LINC00846Q9NV44 126 aa3.92□□□□□ -1.78
ATG4A-207ENST00000474825 SSBP3-AS1Q7Z2R9 100 aa3.91□□□□□ -1.78
ATG4A-207ENST00000474825 LRP1Q07954 4544 aaKnown RBP3.9□□□□□ -1.78
ATG4A-207ENST00000474825 TRBV7-7A0A0K0K1E9 115 aa3.9□□□□□ -1.79
ATG4A-207ENST00000474825 ANAPC11Q9NYG5 84 aa3.9□□□□□ -1.79
ATG4A-207ENST00000474825 A0A087X002 238 aa3.89□□□□□ -1.79
ATG4A-207ENST00000474825 CD164Q04900 197 aa3.89□□□□□ -1.79
ATG4A-207ENST00000474825 KRTAP13-2Q52LG2 175 aa3.89□□□□□ -1.79
ATG4A-207ENST00000474825 Q5VSD8 79 aa3.89□□□□□ -1.79
ATG4A-207ENST00000474825 LINC00643Q86TS7 51 aa3.89□□□□□ -1.79
ATG4A-207ENST00000474825 IGLV9-49A0A0B4J1Y8 123 aa3.87□□□□□ -1.79
ATG4A-207ENST00000474825 A0A0G2JQZ4 141 aa3.87□□□□□ -1.79
ATG4A-207ENST00000474825 MOBPQ13875 183 aa3.87□□□□□ -1.79
ATG4A-207ENST00000474825 Q6ZVQ6 151 aa3.87□□□□□ -1.79
ATG4A-207ENST00000474825 SS18L2Q9UHA2 77 aa3.87□□□□□ -1.79
ATG4A-207ENST00000474825 ABCA13Q86UQ4 5058 aa3.87□□□□□ -1.79
ATG4A-207ENST00000474825 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms