RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 LINC00483Q53H64 154 aa7.79□□□□□ -1.16
CCDC78-209ENST00000474647 A0A1W2PPM0 123 aa7.77□□□□□ -1.17
CCDC78-209ENST00000474647 KRTAP4-16G5E9R7 235 aaPredicted RBP7.77□□□□□ -1.17
CCDC78-209ENST00000474647 SLC25A20O43772 301 aa7.77□□□□□ -1.17
CCDC78-209ENST00000474647 RPS29P62273 56 aaKnown RBP7.77□□□□□ -1.17
CCDC78-209ENST00000474647 ZNF73O43830 326 aaPredicted RBP7.76□□□□□ -1.17
CCDC78-209ENST00000474647 XP32Q5T750 250 aa7.76□□□□□ -1.17
CCDC78-209ENST00000474647 B5MCH6 92 aa7.75□□□□□ -1.17
CCDC78-209ENST00000474647 K7EP34 96 aa7.75□□□□□ -1.17
CCDC78-209ENST00000474647 ERC2-IT1O76042 136 aa7.75□□□□□ -1.17
CCDC78-209ENST00000474647 C9orf153Q5TBE3 101 aa7.74□□□□□ -1.17
CCDC78-209ENST00000474647 SSBP3-AS1Q7Z2R9 100 aa7.74□□□□□ -1.17
CCDC78-209ENST00000474647 SMIM11BQ8TCY0 68 aa7.74□□□□□ -1.17
CCDC78-209ENST00000474647 PRO1854Q9UHT4 67 aa7.74□□□□□ -1.17
CCDC78-209ENST00000474647 GTF2H5Q6ZYL4 71 aa7.73□□□□□ -1.17
CCDC78-209ENST00000474647 SPCS1Q9Y6A9 102 aa7.73□□□□□ -1.17
CCDC78-209ENST00000474647 FABP2P12104 132 aa7.72□□□□□ -1.17
CCDC78-209ENST00000474647 C6orf99Q4VX62 202 aa7.72□□□□□ -1.17
CCDC78-209ENST00000474647 LCE2CQ5TA81 110 aa7.72□□□□□ -1.17
CCDC78-209ENST00000474647 Q9BRP9 147 aa7.72□□□□□ -1.17
CCDC78-209ENST00000474647 TRBV7-6A0A0J9YX20 115 aa7.71□□□□□ -1.18
CCDC78-209ENST00000474647 Q6ZRX8 168 aa7.71□□□□□ -1.18
CCDC78-209ENST00000474647 H7C2G1 150 aa7.7□□□□□ -1.18
CCDC78-209ENST00000474647 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
CCDC78-209ENST00000474647 Q1RN00 199 aa7.69□□□□□ -1.18
CCDC78-209ENST00000474647 COX7BP24311 80 aa7.68□□□□□ -1.18
CCDC78-209ENST00000474647 MT1HP80294 61 aa7.68□□□□□ -1.18
CCDC78-209ENST00000474647 IGLV8-61A0A075B6I0 122 aa7.67□□□□□ -1.18
CCDC78-209ENST00000474647 PCOTHQ58A44 107 aa7.67□□□□□ -1.18
CCDC78-209ENST00000474647 C9orf92A6NGG3 77 aa7.66□□□□□ -1.18
CCDC78-209ENST00000474647 KRTAP19-2Q3LHN2 52 aa7.66□□□□□ -1.18
CCDC78-209ENST00000474647 TRIAP1O43715 76 aa7.65□□□□□ -1.18
CCDC78-209ENST00000474647 HRCT1Q6UXD1 115 aa7.64□□□□□ -1.19
CCDC78-209ENST00000474647 DHRS4-AS1Q9P1J3 65 aa7.64□□□□□ -1.19
CCDC78-209ENST00000474647 ST20-AS1Q8NBB2 130 aa7.63□□□□□ -1.19
CCDC78-209ENST00000474647 LIMD2Q9BT23 127 aa7.63□□□□□ -1.19
CCDC78-209ENST00000474647 H0YGX0 51 aa7.62□□□□□ -1.19
CCDC78-209ENST00000474647 PSMB2P49721 201 aa7.62□□□□□ -1.19
CCDC78-209ENST00000474647 LINC00575Q6W349 94 aa7.62□□□□□ -1.19
CCDC78-209ENST00000474647 H3BMG7 143 aa7.61□□□□□ -1.19
CCDC78-209ENST00000474647 PRO0461Q9UI25 63 aa7.61□□□□□ -1.19
CCDC78-209ENST00000474647 COX6CP09669 75 aa7.6□□□□□ -1.19
CCDC78-209ENST00000474647 OCIAD2Q56VL3 154 aa7.59□□□□□ -1.19
CCDC78-209ENST00000474647 LYRM7Q5U5X0 104 aa7.59□□□□□ -1.19
CCDC78-209ENST00000474647 FAM218AQ96MZ4 157 aa7.59□□□□□ -1.19
CCDC78-209ENST00000474647 hADV29S1A0JD25 119 aa7.58□□□□□ -1.2
CCDC78-209ENST00000474647 F8W1H4 67 aa7.58□□□□□ -1.2
CCDC78-209ENST00000474647 TCL1BO95988 128 aa7.58□□□□□ -1.2
CCDC78-209ENST00000474647 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
CCDC78-209ENST00000474647 A0A1B0GX51 115 aa7.57□□□□□ -1.2
CCDC78-209ENST00000474647 M0R2T5 61 aa7.57□□□□□ -1.2
CCDC78-209ENST00000474647 SCGB1C2P0DMR2 95 aa7.57□□□□□ -1.2
CCDC78-209ENST00000474647 LORP23490 312 aaPredicted RBP7.57□□□□□ -1.2
CCDC78-209ENST00000474647 CLEC2BQ92478 149 aa7.57□□□□□ -1.2
CCDC78-209ENST00000474647 MTURNQ8N3F0 131 aa7.56□□□□□ -1.2
CCDC78-209ENST00000474647 TRBV20-1A0A075B6N2 111 aa7.55□□□□□ -1.2
CCDC78-209ENST00000474647 SMCPP49901 116 aaPredicted RBP7.55□□□□□ -1.2
CCDC78-209ENST00000474647 IGLV5-48A0A075B6I7 105 aa7.54□□□□□ -1.2
CCDC78-209ENST00000474647 LST1O00453 97 aa7.54□□□□□ -1.2
CCDC78-209ENST00000474647 SNCGO76070 127 aa7.54□□□□□ -1.2
CCDC78-209ENST00000474647 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.54□□□□□ -1.2
CCDC78-209ENST00000474647 Q6ZQY7 126 aa7.54□□□□□ -1.2
CCDC78-209ENST00000474647 SPRR1BP22528 89 aa7.53□□□□□ -1.2
CCDC78-209ENST00000474647 COX6B2Q6YFQ2 88 aa7.53□□□□□ -1.2
CCDC78-209ENST00000474647 LAMTOR3Q9UHA4 124 aa7.53□□□□□ -1.2
CCDC78-209ENST00000474647 FLGP20930 4061 aaPredicted RBP7.52□□□□□ -1.2
CCDC78-209ENST00000474647 K7ERU9 68 aa7.52□□□□□ -1.21
CCDC78-209ENST00000474647 TRACP01848 142 aa7.51□□□□□ -1.21
CCDC78-209ENST00000474647 ETDBQ3ZM63 59 aa7.51□□□□□ -1.21
CCDC78-209ENST00000474647 TEX49A0A1B0GTD5 131 aa7.5□□□□□ -1.21
CCDC78-209ENST00000474647 DNAL4O96015 105 aa7.5□□□□□ -1.21
CCDC78-209ENST00000474647 ATXN8Q156A1 80 aa7.5□□□□□ -1.21
CCDC78-209ENST00000474647 DEFB105AQ8NG35 78 aa7.49□□□□□ -1.21
CCDC78-209ENST00000474647 PPDPFLQ8WWR9 84 aa7.49□□□□□ -1.21
CCDC78-209ENST00000474647 C9JAW5 83 aa7.48□□□□□ -1.21
CCDC78-209ENST00000474647 CD164Q04900 197 aa7.47□□□□□ -1.21
CCDC78-209ENST00000474647 ORMDL1Q9P0S3 153 aa7.47□□□□□ -1.21
CCDC78-209ENST00000474647 GHRHP01286 108 aa7.46□□□□□ -1.22
CCDC78-209ENST00000474647 RPL37P61927 97 aaKnown RBP7.46□□□□□ -1.22
CCDC78-209ENST00000474647 SMIM29Q86T20 159 aa7.46□□□□□ -1.22
CCDC78-209ENST00000474647 VPS25Q9BRG1 176 aa7.45□□□□□ -1.22
CCDC78-209ENST00000474647 H3BQ85 93 aa7.44□□□□□ -1.22
CCDC78-209ENST00000474647 C1orf195Q5TG92 126 aa7.44□□□□□ -1.22
CCDC78-209ENST00000474647 TEN1Q86WV5 123 aa7.44□□□□□ -1.22
CCDC78-209ENST00000474647 ANKRD29Q8N6D5 301 aa7.44□□□□□ -1.22
CCDC78-209ENST00000474647 A0A0G2JQZ4 141 aa7.42□□□□□ -1.22
CCDC78-209ENST00000474647 J3QR89 54 aa7.41□□□□□ -1.22
CCDC78-209ENST00000474647 TMEM256-PLSCR3K7ERE1 68 aa7.41□□□□□ -1.22
CCDC78-209ENST00000474647 F8WEM9 126 aa7.4□□□□□ -1.22
CCDC78-209ENST00000474647 H3BT86 120 aa7.4□□□□□ -1.22
CCDC78-209ENST00000474647 Q5XG85 94 aa7.4□□□□□ -1.22
CCDC78-209ENST00000474647 BAALC-AS2P0C853 105 aa7.39□□□□□ -1.23
CCDC78-209ENST00000474647 NDUFV3P56181 108 aaKnown RBP7.39□□□□□ -1.23
CCDC78-209ENST00000474647 Q6Q795 121 aa7.38□□□□□ -1.23
CCDC78-209ENST00000474647 Q6JHZ5 121 aa7.35□□□□□ -1.23
CCDC78-209ENST00000474647 IGFL1Q6UW32 110 aa7.33□□□□□ -1.24
CCDC78-209ENST00000474647 KRTAP9-7A8MTY7 169 aa7.32□□□□□ -1.24
CCDC78-209ENST00000474647 A0A1B0GV72 72 aa7.31□□□□□ -1.24
CCDC78-209ENST00000474647 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
CCDC78-209ENST00000474647 JMJD7-PLA2G4BH0Y9G9 81 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms