RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PET117Q6UWS5 81 aa3.89□□□□□ -1.79
VPS50-211ENST00000474412 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
VPS50-211ENST00000474412 NDUFV3P56181 108 aaKnown RBP3.88□□□□□ -1.79
VPS50-211ENST00000474412 KRTAP13-3Q3SY46 172 aa3.88□□□□□ -1.79
VPS50-211ENST00000474412 COA6Q5JTJ3 125 aaKnown RBP3.88□□□□□ -1.79
VPS50-211ENST00000474412 LCE3EQ5T5B0 92 aa3.88□□□□□ -1.79
VPS50-211ENST00000474412 C9orf153Q5TBE3 101 aa3.88□□□□□ -1.79
VPS50-211ENST00000474412 SPANXCQ9NY87 97 aa3.88□□□□□ -1.79
VPS50-211ENST00000474412 TIMM17BO60830 172 aa3.87□□□□□ -1.79
VPS50-211ENST00000474412 PCP2Q8IVA1 136 aa3.87□□□□□ -1.79
VPS50-211ENST00000474412 OR13C6PQ8NH95 151 aa3.87□□□□□ -1.79
VPS50-211ENST00000474412 KRTAP4-1Q9BYQ7 146 aa3.87□□□□□ -1.79
VPS50-211ENST00000474412 OCR1Q9BZK8 76 aa3.87□□□□□ -1.79
VPS50-211ENST00000474412 S100A12P80511 92 aa3.86□□□□□ -1.79
VPS50-211ENST00000474412 SPAG11AQ6PDA7 123 aa3.86□□□□□ -1.79
VPS50-211ENST00000474412 ELOF1P60002 83 aaKnown RBP3.85□□□□□ -1.79
VPS50-211ENST00000474412 CTAG1AP78358 180 aa3.85□□□□□ -1.79
VPS50-211ENST00000474412 C6orf99Q4VX62 202 aa3.85□□□□□ -1.79
VPS50-211ENST00000474412 SPANXDQ9BXN6 97 aa3.85□□□□□ -1.79
VPS50-211ENST00000474412 A0A0G2JQZ4 141 aa3.84□□□□□ -1.79
VPS50-211ENST00000474412 LOC105371267A0A1B0GV96 52 aa3.84□□□□□ -1.79
VPS50-211ENST00000474412 SPINK1P00995 79 aa3.84□□□□□ -1.79
VPS50-211ENST00000474412 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
VPS50-211ENST00000474412 HRCT1Q6UXD1 115 aa3.84□□□□□ -1.79
VPS50-211ENST00000474412 SCGB1D4Q6XE38 83 aa3.84□□□□□ -1.79
VPS50-211ENST00000474412 FP248Q71RG6 208 aaPredicted RBP3.84□□□□□ -1.79
VPS50-211ENST00000474412 FAT4Q6V0I7 4981 aa3.83□□□□□ -1.8
VPS50-211ENST00000474412 SPRR1BP22528 89 aa3.83□□□□□ -1.8
VPS50-211ENST00000474412 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
VPS50-211ENST00000474412 JOSD1Q15040 202 aaPredicted RBP3.83□□□□□ -1.8
VPS50-211ENST00000474412 Q1RN00 199 aa3.83□□□□□ -1.8
VPS50-211ENST00000474412 HIST3H2BBQ8N257 126 aa3.83□□□□□ -1.8
VPS50-211ENST00000474412 C20orf202A1L168 122 aa3.82□□□□□ -1.8
VPS50-211ENST00000474412 COX7BP24311 80 aa3.82□□□□□ -1.8
VPS50-211ENST00000474412 RPS29P62273 56 aaKnown RBP3.82□□□□□ -1.8
VPS50-211ENST00000474412 SSBP3-AS1Q7Z2R9 100 aa3.82□□□□□ -1.8
VPS50-211ENST00000474412 MUSTN1Q8IVN3 82 aa3.82□□□□□ -1.8
VPS50-211ENST00000474412 HIST1H2BLQ99880 126 aa3.82□□□□□ -1.8
VPS50-211ENST00000474412 Q6ZVQ6 151 aa3.81□□□□□ -1.8
VPS50-211ENST00000474412 H7C2G1 150 aa3.8□□□□□ -1.8
VPS50-211ENST00000474412 ASB16-AS1Q495Z4 193 aa3.8□□□□□ -1.8
VPS50-211ENST00000474412 DEFB105AQ8NG35 78 aa3.8□□□□□ -1.8
VPS50-211ENST00000474412 DHRS4-AS1Q9P1J3 65 aa3.8□□□□□ -1.8
VPS50-211ENST00000474412 A0A0U1RQV1 116 aa3.79□□□□□ -1.8
VPS50-211ENST00000474412 A6NDN8 102 aa3.79□□□□□ -1.8
VPS50-211ENST00000474412 C9orf92A6NGG3 77 aa3.79□□□□□ -1.8
VPS50-211ENST00000474412 SLC25A20O43772 301 aa3.79□□□□□ -1.8
VPS50-211ENST00000474412 HINT1P49773 126 aaPredicted RBP3.79□□□□□ -1.8
VPS50-211ENST00000474412 SMIM11BQ8TCY0 68 aa3.79□□□□□ -1.8
VPS50-211ENST00000474412 IGLV5-48A0A075B6I7 105 aa3.78□□□□□ -1.8
VPS50-211ENST00000474412 A0A1B0GWB2 263 aa3.78□□□□□ -1.8
VPS50-211ENST00000474412 IFITM1P13164 125 aa3.78□□□□□ -1.8
VPS50-211ENST00000474412 LINC00518Q8N0U6 118 aa3.78□□□□□ -1.8
VPS50-211ENST00000474412 C12orf57Q99622 126 aa3.78□□□□□ -1.8
VPS50-211ENST00000474412 A4D1N5 150 aa3.77□□□□□ -1.81
VPS50-211ENST00000474412 C5orf52A6NGY3 159 aa3.77□□□□□ -1.81
VPS50-211ENST00000474412 S100A2P29034 98 aa3.77□□□□□ -1.81
VPS50-211ENST00000474412 TAL2Q16559 108 aa3.77□□□□□ -1.81
VPS50-211ENST00000474412 LAMTOR3Q9UHA4 124 aa3.77□□□□□ -1.81
VPS50-211ENST00000474412 CBY1Q9Y3M2 126 aa3.77□□□□□ -1.81
VPS50-211ENST00000474412 TRBV7-6A0A0J9YX20 115 aa3.76□□□□□ -1.81
VPS50-211ENST00000474412 TEX49A0A1B0GTD5 131 aa3.76□□□□□ -1.81
VPS50-211ENST00000474412 Q6ZVH6 145 aa3.76□□□□□ -1.81
VPS50-211ENST00000474412 LIMD2Q9BT23 127 aa3.76□□□□□ -1.81
VPS50-211ENST00000474412 KRTAP19-2Q3LHN2 52 aa3.75□□□□□ -1.81
VPS50-211ENST00000474412 SLC25A34Q6PIV7 304 aa3.75□□□□□ -1.81
VPS50-211ENST00000474412 TRAV13-2A0A0B4J235 113 aa3.74□□□□□ -1.81
VPS50-211ENST00000474412 C1orf195Q5TG92 126 aa3.74□□□□□ -1.81
VPS50-211ENST00000474412 Q6ZQY7 126 aa3.74□□□□□ -1.81
VPS50-211ENST00000474412 COPS9Q8WXC6 57 aa3.74□□□□□ -1.81
VPS50-211ENST00000474412 PRO1933Q9H354 126 aa3.74□□□□□ -1.81
VPS50-211ENST00000474412 HSBP1L1C9JCN9 74 aa3.73□□□□□ -1.81
VPS50-211ENST00000474412 S100A6P06703 90 aa3.73□□□□□ -1.81
VPS50-211ENST00000474412 CD164Q04900 197 aa3.73□□□□□ -1.81
VPS50-211ENST00000474412 PCOTHQ58A44 107 aa3.73□□□□□ -1.81
VPS50-211ENST00000474412 LINC00575Q6W349 94 aa3.73□□□□□ -1.81
VPS50-211ENST00000474412 COX8AP10176 69 aa3.72□□□□□ -1.81
VPS50-211ENST00000474412 C2orf91Q6ZV80 131 aa3.72□□□□□ -1.81
VPS50-211ENST00000474412 AKR1D1P51857 326 aa3.71□□□□□ -1.82
VPS50-211ENST00000474412 IGFL1Q6UW32 110 aa3.71□□□□□ -1.82
VPS50-211ENST00000474412 C14orf144Q96I85 54 aa3.71□□□□□ -1.82
VPS50-211ENST00000474412 IGLV8-61A0A075B6I0 122 aa3.7□□□□□ -1.82
VPS50-211ENST00000474412 H3BUT2 72 aa3.7□□□□□ -1.82
VPS50-211ENST00000474412 SPATA45Q537H7 98 aa3.7□□□□□ -1.82
VPS50-211ENST00000474412 Q5XG85 94 aa3.7□□□□□ -1.82
VPS50-211ENST00000474412 HIST1H4GQ99525 98 aa3.7□□□□□ -1.82
VPS50-211ENST00000474412 NHP2Q9NX24 153 aaKnown RBP3.7□□□□□ -1.82
VPS50-211ENST00000474412 hADV29S1A0JD25 119 aa3.69□□□□□ -1.82
VPS50-211ENST00000474412 CLEC2BQ92478 149 aa3.69□□□□□ -1.82
VPS50-211ENST00000474412 TRBV7-7A0A0K0K1E9 115 aa3.68□□□□□ -1.82
VPS50-211ENST00000474412 F8WEM9 126 aa3.68□□□□□ -1.82
VPS50-211ENST00000474412 RPL37P61927 97 aaKnown RBP3.68□□□□□ -1.82
VPS50-211ENST00000474412 MT1HP80294 61 aa3.68□□□□□ -1.82
VPS50-211ENST00000474412 DLEU1O43261 78 aa3.67□□□□□ -1.82
VPS50-211ENST00000474412 FXYD2P54710 66 aa3.67□□□□□ -1.82
VPS50-211ENST00000474412 VAMP3Q15836 100 aa3.67□□□□□ -1.82
VPS50-211ENST00000474412 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
VPS50-211ENST00000474412 VAMP8Q9BV40 100 aa3.67□□□□□ -1.82
VPS50-211ENST00000474412 A0A0B4J2C4 111 aa3.66□□□□□ -1.82
VPS50-211ENST00000474412 PCP4L1A6NKN8 68 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms