RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 LAMTOR3Q9UHA4 124 aa4.99□□□□□ -1.61
CNN3-205ENST00000474409 FLG2Q5D862 2391 aaPredicted RBP4.98□□□□□ -1.61
CNN3-205ENST00000474409 IGLV9-49A0A0B4J1Y8 123 aa4.98□□□□□ -1.61
CNN3-205ENST00000474409 TMEM256-PLSCR3K7ERE1 68 aa4.98□□□□□ -1.61
CNN3-205ENST00000474409 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
CNN3-205ENST00000474409 FAM229BQ4G0N7 80 aa4.98□□□□□ -1.61
CNN3-205ENST00000474409 C3orf22Q8N5N4 141 aa4.98□□□□□ -1.61
CNN3-205ENST00000474409 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
CNN3-205ENST00000474409 A0A1B0GV72 72 aa4.97□□□□□ -1.61
CNN3-205ENST00000474409 H3BT86 120 aa4.97□□□□□ -1.61
CNN3-205ENST00000474409 BAALC-AS2P0C853 105 aa4.97□□□□□ -1.61
CNN3-205ENST00000474409 CRYGAP11844 174 aa4.97□□□□□ -1.61
CNN3-205ENST00000474409 SRRM2Q9UQ35 2752 aaKnown RBP4.97□□□□□ -1.61
CNN3-205ENST00000474409 A0A087X002 238 aa4.96□□□□□ -1.62
CNN3-205ENST00000474409 MOBPQ13875 183 aa4.96□□□□□ -1.62
CNN3-205ENST00000474409 Q8NBF4 154 aa4.96□□□□□ -1.62
CNN3-205ENST00000474409 NDUFV3P56181 108 aaKnown RBP4.95□□□□□ -1.62
CNN3-205ENST00000474409 UBE2V1Q13404 147 aa4.95□□□□□ -1.62
CNN3-205ENST00000474409 SMIM29Q86T20 159 aa4.95□□□□□ -1.62
CNN3-205ENST00000474409 ANKRD29Q8N6D5 301 aa4.95□□□□□ -1.62
CNN3-205ENST00000474409 ABCA13Q86UQ4 5058 aa4.95□□□□□ -1.62
CNN3-205ENST00000474409 FAT3Q8TDW7 4589 aa4.94□□□□□ -1.62
CNN3-205ENST00000474409 PRR26Q8N8Z3 221 aa4.94□□□□□ -1.62
CNN3-205ENST00000474409 TYMSOSQ8TAI1 123 aa4.94□□□□□ -1.62
CNN3-205ENST00000474409 KRTAP13-2Q52LG2 175 aa4.93□□□□□ -1.62
CNN3-205ENST00000474409 LINC01600Q96MT4 127 aa4.93□□□□□ -1.62
CNN3-205ENST00000474409 F8W1H4 67 aa4.92□□□□□ -1.62
CNN3-205ENST00000474409 PRO0461Q9UI25 63 aa4.92□□□□□ -1.62
CNN3-205ENST00000474409 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
CNN3-205ENST00000474409 JMJD7-PLA2G4BH0Y9G9 81 aa4.91□□□□□ -1.62
CNN3-205ENST00000474409 OXTP01178 125 aa4.91□□□□□ -1.62
CNN3-205ENST00000474409 SMCPP49901 116 aaPredicted RBP4.91□□□□□ -1.62
CNN3-205ENST00000474409 RBM3P98179 157 aaKnown RBP4.91□□□□□ -1.62
CNN3-205ENST00000474409 Q6JHZ5 121 aa4.91□□□□□ -1.62
CNN3-205ENST00000474409 DSCR8Q96T75 97 aa4.91□□□□□ -1.62
CNN3-205ENST00000474409 IGLV8-61A0A075B6I0 122 aa4.9□□□□□ -1.63
CNN3-205ENST00000474409 IGFL1Q6UW32 110 aa4.9□□□□□ -1.63
CNN3-205ENST00000474409 TNXBP22105 4242 aa4.89□□□□□ -1.63
CNN3-205ENST00000474409 SSBP3-AS1Q7Z2R9 100 aa4.89□□□□□ -1.63
CNN3-205ENST00000474409 TEN1Q86WV5 123 aa4.89□□□□□ -1.63
CNN3-205ENST00000474409 LINC00304Q8N9R0 145 aa4.89□□□□□ -1.63
CNN3-205ENST00000474409 VPS25Q9BRG1 176 aa4.89□□□□□ -1.63
CNN3-205ENST00000474409 C14orf132Q9NPU4 83 aa4.89□□□□□ -1.63
CNN3-205ENST00000474409 A0A0G2JQZ4 141 aa4.88□□□□□ -1.63
CNN3-205ENST00000474409 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
CNN3-205ENST00000474409 J3QL48 77 aa4.88□□□□□ -1.63
CNN3-205ENST00000474409 ETDBQ3ZM63 59 aa4.88□□□□□ -1.63
CNN3-205ENST00000474409 C4orf48Q5BLP8 95 aa4.88□□□□□ -1.63
CNN3-205ENST00000474409 HRCT1Q6UXD1 115 aa4.88□□□□□ -1.63
CNN3-205ENST00000474409 MYCBP2O75592 4640 aa4.88□□□□□ -1.63
CNN3-205ENST00000474409 TRBV7-4A0A0J9YYF1 115 aa4.87□□□□□ -1.63
CNN3-205ENST00000474409 LOC110117498A0A087WWA1 95 aa4.86□□□□□ -1.63
CNN3-205ENST00000474409 CCKP06307 115 aa4.86□□□□□ -1.63
CNN3-205ENST00000474409 PDE6GP18545 87 aa4.86□□□□□ -1.63
CNN3-205ENST00000474409 OBSCN-AS1Q96MR7 158 aa4.86□□□□□ -1.63
CNN3-205ENST00000474409 PCLOQ9Y6V0 5065 aa4.85□□□□□ -1.63
CNN3-205ENST00000474409 MT1HL1P0DM35 61 aa4.85□□□□□ -1.63
CNN3-205ENST00000474409 KRTAP10-8P60410 259 aa4.85□□□□□ -1.63
CNN3-205ENST00000474409 C21orf62-AS1Q17RA5 79 aa4.85□□□□□ -1.63
CNN3-205ENST00000474409 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
CNN3-205ENST00000474409 CD164Q04900 197 aa4.84□□□□□ -1.63
CNN3-205ENST00000474409 Q6ZQT0 140 aa4.84□□□□□ -1.63
CNN3-205ENST00000474409 LIMD2Q9BT23 127 aa4.84□□□□□ -1.63
CNN3-205ENST00000474409 TRBV7-7A0A0K0K1E9 115 aa4.83□□□□□ -1.64
CNN3-205ENST00000474409 A0A1W2PNM2 257 aa4.83□□□□□ -1.64
CNN3-205ENST00000474409 SPINK1P00995 79 aa4.83□□□□□ -1.64
CNN3-205ENST00000474409 DMBT1Q9UGM3 2413 aaPredicted RBP4.82□□□□□ -1.64
CNN3-205ENST00000474409 A0A087WSZ3 146 aa4.82□□□□□ -1.64
CNN3-205ENST00000474409 Q6Q795 121 aa4.82□□□□□ -1.64
CNN3-205ENST00000474409 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
CNN3-205ENST00000474409 SS18L2Q9UHA2 77 aa4.81□□□□□ -1.64
CNN3-205ENST00000474409 A0A1B0GW54 56 aa4.78□□□□□ -1.64
CNN3-205ENST00000474409 J3QR89 54 aa4.77□□□□□ -1.65
CNN3-205ENST00000474409 Q5XG85 94 aa4.76□□□□□ -1.65
CNN3-205ENST00000474409 RETNLBQ9BQ08 111 aa4.76□□□□□ -1.65
CNN3-205ENST00000474409 ASB16-AS1Q495Z4 193 aa4.75□□□□□ -1.65
CNN3-205ENST00000474409 FAM240AA0A1B0GVK7 77 aa4.74□□□□□ -1.65
CNN3-205ENST00000474409 ACYP1P07311 99 aa4.74□□□□□ -1.65
CNN3-205ENST00000474409 NREPQ16612 68 aa4.74□□□□□ -1.65
CNN3-205ENST00000474409 SIGMAR1Q99720 223 aa4.74□□□□□ -1.65
CNN3-205ENST00000474409 UBL5Q9BZL1 73 aa4.74□□□□□ -1.65
CNN3-205ENST00000474409 LINC00846Q9NV44 126 aa4.73□□□□□ -1.65
CNN3-205ENST00000474409 K7ERU9 68 aa4.72□□□□□ -1.65
CNN3-205ENST00000474409 C1orf195Q5TG92 126 aa4.72□□□□□ -1.65
CNN3-205ENST00000474409 Q6ZVQ6 151 aa4.72□□□□□ -1.65
CNN3-205ENST00000474409 IGKV4-1P06312 121 aa4.71□□□□□ -1.66
CNN3-205ENST00000474409 PRR4Q16378 134 aa4.71□□□□□ -1.66
CNN3-205ENST00000474409 FP248Q71RG6 208 aaPredicted RBP4.71□□□□□ -1.66
CNN3-205ENST00000474409 Q96NJ1 140 aa4.71□□□□□ -1.66
CNN3-205ENST00000474409 J3KT08 172 aa4.7□□□□□ -1.66
CNN3-205ENST00000474409 DEFB116Q30KQ4 102 aa4.7□□□□□ -1.66
CNN3-205ENST00000474409 LINC00472Q9H8W2 130 aa4.7□□□□□ -1.66
CNN3-205ENST00000474409 BPY2O14599 106 aa4.69□□□□□ -1.66
CNN3-205ENST00000474409 IGLV7-46A0A075B6I9 117 aa4.67□□□□□ -1.66
CNN3-205ENST00000474409 NDUFB1O75438 58 aa4.67□□□□□ -1.66
CNN3-205ENST00000474409 ATP5EP2Q5VTU8 51 aa4.66□□□□□ -1.66
CNN3-205ENST00000474409 A0A1B0GVX0 72 aa4.65□□□□□ -1.67
CNN3-205ENST00000474409 A8MWP4 228 aa4.65□□□□□ -1.67
CNN3-205ENST00000474409 IGHV6-1A0A0B4J1U7 121 aa4.64□□□□□ -1.67
CNN3-205ENST00000474409 IGKV3D-7A0A0C4DH55 119 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms