RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
SAMM50-203ENST00000474323 LIMD2Q9BT23 127 aa9.34□□□□□ -0.91
SAMM50-203ENST00000474323 UBE2AP49459 152 aa9.34□□□□□ -0.91
SAMM50-203ENST00000474323 SPANXA2-OT1Q8N9U9 137 aa9.34□□□□□ -0.91
SAMM50-203ENST00000474323 SPRR1AP35321 89 aa9.32□□□□□ -0.92
SAMM50-203ENST00000474323 WFDC10BQ8IUB3 73 aa9.31□□□□□ -0.92
SAMM50-203ENST00000474323 Q8N9P0 234 aaPredicted RBP9.31□□□□□ -0.92
SAMM50-203ENST00000474323 PLA2G2DQ9UNK4 145 aa9.31□□□□□ -0.92
SAMM50-203ENST00000474323 A8MU10 97 aa9.3□□□□□ -0.92
SAMM50-203ENST00000474323 CHKB-CPT1BH3BT56 60 aa9.3□□□□□ -0.92
SAMM50-203ENST00000474323 K7EIL1 84 aa9.3□□□□□ -0.92
SAMM50-203ENST00000474323 H3BPC8 53 aa9.29□□□□□ -0.92
SAMM50-203ENST00000474323 LINC00208Q96KT6 92 aa9.29□□□□□ -0.92
SAMM50-203ENST00000474323 LINC00588Q9Y4M8 146 aa9.29□□□□□ -0.92
SAMM50-203ENST00000474323 IGLV1-50A0A075B6I6 118 aa9.29□□□□□ -0.92
SAMM50-203ENST00000474323 KTN1-AS1Q86SY8 53 aa9.28□□□□□ -0.92
SAMM50-203ENST00000474323 RPL37AP8A6NKH3 93 aa9.28□□□□□ -0.92
SAMM50-203ENST00000474323 C16orf90A8MZG2 172 aa9.27□□□□□ -0.93
SAMM50-203ENST00000474323 IGLV5-37A0A075B6J1 123 aa9.27□□□□□ -0.93
SAMM50-203ENST00000474323 TLX1NBP0CAT3 122 aa9.27□□□□□ -0.93
SAMM50-203ENST00000474323 WFDC13Q8IUB5 93 aa9.27□□□□□ -0.93
SAMM50-203ENST00000474323 H3BNG1 76 aa9.25□□□□□ -0.93
SAMM50-203ENST00000474323 LINC00476Q8WZB0 136 aa9.25□□□□□ -0.93
SAMM50-203ENST00000474323 IGKV2D-24A0A075B6R9 120 aa9.24□□□□□ -0.93
SAMM50-203ENST00000474323 J3QL48 77 aa9.24□□□□□ -0.93
SAMM50-203ENST00000474323 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
SAMM50-203ENST00000474323 HUWE1Q7Z6Z7 4374 aaKnown RBP9.24□□□□□ -0.93
SAMM50-203ENST00000474323 KRTAP29-1A8MX34 341 aaPredicted RBP9.24□□□□□ -0.93
SAMM50-203ENST00000474323 PRR15LQ9BU68 103 aa9.24□□□□□ -0.93
SAMM50-203ENST00000474323 STAB2Q8WWQ8 2551 aa9.24□□□□□ -0.93
SAMM50-203ENST00000474323 DEFB116Q30KQ4 102 aa9.23□□□□□ -0.93
SAMM50-203ENST00000474323 COL7A1Q02388 2944 aa9.23□□□□□ -0.93
SAMM50-203ENST00000474323 H0Y9P7 68 aa9.22□□□□□ -0.93
SAMM50-203ENST00000474323 Q75L30 129 aa9.22□□□□□ -0.93
SAMM50-203ENST00000474323 LOC101927531A0A1B0GV80 90 aa9.21□□□□□ -0.94
SAMM50-203ENST00000474323 IGFL1Q6UW32 110 aa9.21□□□□□ -0.94
SAMM50-203ENST00000474323 DEFB131BA0A096LNP1 70 aa9.2□□□□□ -0.94
SAMM50-203ENST00000474323 FAM168BA1KXE4 195 aa9.2□□□□□ -0.94
SAMM50-203ENST00000474323 NDUFS5O43920 106 aa9.2□□□□□ -0.94
SAMM50-203ENST00000474323 LCA10Q71F78 164 aa9.19□□□□□ -0.94
SAMM50-203ENST00000474323 C9orf163Q8N9P6 203 aa9.19□□□□□ -0.94
SAMM50-203ENST00000474323 SPTSSBQ8NFR3 76 aa9.19□□□□□ -0.94
SAMM50-203ENST00000474323 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
SAMM50-203ENST00000474323 A0A087WSZ3 146 aa9.17□□□□□ -0.94
SAMM50-203ENST00000474323 CASC2Q6XLA1 102 aa9.17□□□□□ -0.94
SAMM50-203ENST00000474323 PHF5AQ7RTV0 110 aaKnown RBP9.17□□□□□ -0.94
SAMM50-203ENST00000474323 IGLV8-61A0A075B6I0 122 aa9.16□□□□□ -0.94
SAMM50-203ENST00000474323 A6NED7 52 aa9.16□□□□□ -0.94
SAMM50-203ENST00000474323 KRTAP7-1Q8IUC3 87 aa9.16□□□□□ -0.94
SAMM50-203ENST00000474323 A0A0G2JQZ4 141 aa9.15□□□□□ -0.94
SAMM50-203ENST00000474323 A0A1W2PNN7 141 aa9.15□□□□□ -0.94
SAMM50-203ENST00000474323 DNAH9Q9NYC9 4486 aa9.15□□□□□ -0.94
SAMM50-203ENST00000474323 RPL37AP61513 92 aaKnown RBP9.15□□□□□ -0.95
SAMM50-203ENST00000474323 A6NN06 94 aa9.14□□□□□ -0.95
SAMM50-203ENST00000474323 REG3GQ6UW15 175 aa9.14□□□□□ -0.95
SAMM50-203ENST00000474323 DNHD1Q96M86 4753 aa9.14□□□□□ -0.95
SAMM50-203ENST00000474323 COA5Q86WW8 74 aa9.14□□□□□ -0.95
SAMM50-203ENST00000474323 IGLV7-46A0A075B6I9 117 aa9.13□□□□□ -0.95
SAMM50-203ENST00000474323 CDC42SE1Q9NRR8 79 aa9.13□□□□□ -0.95
SAMM50-203ENST00000474323 CNBPP62633 177 aaKnown RBP9.12□□□□□ -0.95
SAMM50-203ENST00000474323 A8MWP4 228 aa9.1□□□□□ -0.95
SAMM50-203ENST00000474323 MEGF8Q7Z7M0 2845 aa9.08□□□□□ -0.96
SAMM50-203ENST00000474323 LINC01558Q9Y6Z2 57 aa9.07□□□□□ -0.96
SAMM50-203ENST00000474323 DNAH10OSP0CZ25 163 aa9.06□□□□□ -0.96
SAMM50-203ENST00000474323 LINC00472Q9H8W2 130 aa9.06□□□□□ -0.96
SAMM50-203ENST00000474323 PRKDCP78527 4128 aaKnown RBP9.05□□□□□ -0.96
SAMM50-203ENST00000474323 C7orf65Q6ZTY9 151 aa9.05□□□□□ -0.96
SAMM50-203ENST00000474323 TENM2Q9NT68 2774 aa9.05□□□□□ -0.96
SAMM50-203ENST00000474323 PLAC8Q9NZF1 115 aa9.05□□□□□ -0.96
SAMM50-203ENST00000474323 PLA2G1BP04054 148 aaKnown RBP9.04□□□□□ -0.96
SAMM50-203ENST00000474323 LYSTQ99698 3801 aa9.02□□□□□ -0.97
SAMM50-203ENST00000474323 PRLHP81277 87 aa9.01□□□□□ -0.97
SAMM50-203ENST00000474323 MOBPQ13875 183 aa9.01□□□□□ -0.97
SAMM50-203ENST00000474323 CSMD3Q7Z407 3707 aa9.01□□□□□ -0.97
SAMM50-203ENST00000474323 MMP24-AS1A0A0U1RRL7 71 aa9□□□□□ -0.97
SAMM50-203ENST00000474323 LINC00313P59037 77 aa9□□□□□ -0.97
SAMM50-203ENST00000474323 CASC10Q5T4H9 136 aa9□□□□□ -0.97
SAMM50-203ENST00000474323 SPAG11AQ6PDA7 123 aa9□□□□□ -0.97
SAMM50-203ENST00000474323 H0Y9J4 135 aa8.99□□□□□ -0.97
SAMM50-203ENST00000474323 TP53AIP1Q9HCN2 124 aa8.98□□□□□ -0.97
SAMM50-203ENST00000474323 SPRR1BP22528 89 aa8.97□□□□□ -0.97
SAMM50-203ENST00000474323 PCOTHQ58A44 107 aa8.97□□□□□ -0.97
SAMM50-203ENST00000474323 ASB16-AS1Q495Z4 193 aa8.93□□□□□ -0.98
SAMM50-203ENST00000474323 Q6ZR54 194 aa8.93□□□□□ -0.98
SAMM50-203ENST00000474323 DYNC2H1Q8NCM8 4307 aaKnown RBP8.93□□□□□ -0.98
SAMM50-203ENST00000474323 SPINK7P58062 85 aa8.93□□□□□ -0.98
SAMM50-203ENST00000474323 PLECQ15149 4684 aaKnown RBP8.92□□□□□ -0.98
SAMM50-203ENST00000474323 DNAH7Q8WXX0 4024 aa8.92□□□□□ -0.98
SAMM50-203ENST00000474323 APLNQ9ULZ1 77 aa8.91□□□□□ -0.98
SAMM50-203ENST00000474323 DNAH1Q9P2D7 4330 aa8.91□□□□□ -0.98
SAMM50-203ENST00000474323 HRES1P13985 223 aa8.9□□□□□ -0.98
SAMM50-203ENST00000474323 IGKV2-24A0A0C4DH68 120 aa8.9□□□□□ -0.99
SAMM50-203ENST00000474323 FBN3Q75N90 2809 aa8.89□□□□□ -0.99
SAMM50-203ENST00000474323 UBE2DNLQ8IWF7 75 aa8.89□□□□□ -0.99
SAMM50-203ENST00000474323 TGP01266 2768 aa8.89□□□□□ -0.99
SAMM50-203ENST00000474323 A0A096LNI7 61 aa8.88□□□□□ -0.99
SAMM50-203ENST00000474323 ZNF706Q9Y5V0 76 aaPredicted RBP8.88□□□□□ -0.99
SAMM50-203ENST00000474323 STARD9Q9P2P6 4700 aa8.87□□□□□ -0.99
SAMM50-203ENST00000474323 DNAH10Q8IVF4 4471 aa8.85□□□□□ -0.99
SAMM50-203ENST00000474323 NUPR2A6NF83 97 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms