RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 Q9BRP9 147 aa11.79□□□□□ -0.52
APP-215ENST00000474136 HIGD2AQ9BW72 106 aa11.79□□□□□ -0.52
APP-215ENST00000474136 SPCS1Q9Y6A9 102 aa11.79□□□□□ -0.52
APP-215ENST00000474136 TCL1BO95988 128 aa11.78□□□□□ -0.52
APP-215ENST00000474136 GTF2H5Q6ZYL4 71 aa11.78□□□□□ -0.52
APP-215ENST00000474136 TYMSOSQ8TAI1 123 aa11.78□□□□□ -0.52
APP-215ENST00000474136 H3BQ85 93 aa11.77□□□□□ -0.53
APP-215ENST00000474136 OCIAD2Q56VL3 154 aa11.77□□□□□ -0.53
APP-215ENST00000474136 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.77□□□□□ -0.53
APP-215ENST00000474136 FAM218AQ96MZ4 157 aa11.77□□□□□ -0.53
APP-215ENST00000474136 SMCR5Q8TEV8 140 aa11.76□□□□□ -0.53
APP-215ENST00000474136 CRYGAP11844 174 aa11.74□□□□□ -0.53
APP-215ENST00000474136 CDIP1Q9H305 208 aa11.74□□□□□ -0.53
APP-215ENST00000474136 ANAPC11Q9NYG5 84 aa11.74□□□□□ -0.53
APP-215ENST00000474136 ZNF706Q9Y5V0 76 aaPredicted RBP11.74□□□□□ -0.53
APP-215ENST00000474136 K7EP34 96 aa11.73□□□□□ -0.53
APP-215ENST00000474136 Q6ZQY7 126 aa11.71□□□□□ -0.53
APP-215ENST00000474136 PPDPFLQ8WWR9 84 aa11.71□□□□□ -0.53
APP-215ENST00000474136 ORMDL1Q9P0S3 153 aa11.7□□□□□ -0.54
APP-215ENST00000474136 FSIP2Q5CZC0 6907 aa11.7□□□□□ -0.54
APP-215ENST00000474136 H3BMG7 143 aa11.69□□□□□ -0.54
APP-215ENST00000474136 ERC2-IT1O76042 136 aa11.69□□□□□ -0.54
APP-215ENST00000474136 TPRXLQ17RH7 258 aa11.69□□□□□ -0.54
APP-215ENST00000474136 KRTAP13-2Q52LG2 175 aa11.69□□□□□ -0.54
APP-215ENST00000474136 IGLV5-48A0A075B6I7 105 aa11.66□□□□□ -0.54
APP-215ENST00000474136 IGLV7-46A0A075B6I9 117 aa11.66□□□□□ -0.54
APP-215ENST00000474136 A0A1B0GV90 55 aa11.66□□□□□ -0.54
APP-215ENST00000474136 TMEM256-PLSCR3K7ERE1 68 aa11.66□□□□□ -0.54
APP-215ENST00000474136 LCE2DQ5TA82 110 aaPredicted RBP11.66□□□□□ -0.54
APP-215ENST00000474136 TEX49A0A1B0GTD5 131 aa11.65□□□□□ -0.54
APP-215ENST00000474136 C9JAW5 83 aa11.65□□□□□ -0.54
APP-215ENST00000474136 CRCT1Q9UGL9 99 aa11.64□□□□□ -0.55
APP-215ENST00000474136 BAALC-AS2P0C853 105 aa11.63□□□□□ -0.55
APP-215ENST00000474136 LINC00304Q8N9R0 145 aa11.63□□□□□ -0.55
APP-215ENST00000474136 SPRR4Q96PI1 79 aa11.63□□□□□ -0.55
APP-215ENST00000474136 H3BT86 120 aa11.62□□□□□ -0.55
APP-215ENST00000474136 SPRR1BP22528 89 aa11.62□□□□□ -0.55
APP-215ENST00000474136 ST20-AS1Q8NBB2 130 aa11.62□□□□□ -0.55
APP-215ENST00000474136 DEFB105AQ8NG35 78 aa11.62□□□□□ -0.55
APP-215ENST00000474136 UBE2V1Q13404 147 aa11.61□□□□□ -0.55
APP-215ENST00000474136 GAGE2AQ6NT46 116 aa11.6□□□□□ -0.55
APP-215ENST00000474136 F8W1H4 67 aa11.6□□□□□ -0.55
APP-215ENST00000474136 LINC00483Q53H64 154 aa11.6□□□□□ -0.55
APP-215ENST00000474136 Q8N377 158 aa11.6□□□□□ -0.55
APP-215ENST00000474136 LINC01547P58512 204 aaPredicted RBP11.59□□□□□ -0.55
APP-215ENST00000474136 ANKRD29Q8N6D5 301 aa11.58□□□□□ -0.56
APP-215ENST00000474136 LAMTOR3Q9UHA4 124 aa11.57□□□□□ -0.56
APP-215ENST00000474136 FAM229BQ4G0N7 80 aa11.56□□□□□ -0.56
APP-215ENST00000474136 F8WEM9 126 aa11.54□□□□□ -0.56
APP-215ENST00000474136 NDUFV3P56181 108 aaKnown RBP11.54□□□□□ -0.56
APP-215ENST00000474136 PRO0461Q9UI25 63 aa11.53□□□□□ -0.56
APP-215ENST00000474136 JMJD7-PLA2G4BH0Y9G9 81 aa11.51□□□□□ -0.57
APP-215ENST00000474136 KRTAP4-1Q9BYQ7 146 aa11.51□□□□□ -0.57
APP-215ENST00000474136 MTURNQ8N3F0 131 aa11.5□□□□□ -0.57
APP-215ENST00000474136 SMIM29Q86T20 159 aa11.49□□□□□ -0.57
APP-215ENST00000474136 SMCPP49901 116 aaPredicted RBP11.47□□□□□ -0.57
APP-215ENST00000474136 C3orf22Q8N5N4 141 aa11.46□□□□□ -0.57
APP-215ENST00000474136 RBM3P98179 157 aaKnown RBP11.45□□□□□ -0.58
APP-215ENST00000474136 ASB16-AS1Q495Z4 193 aa11.45□□□□□ -0.58
APP-215ENST00000474136 IGLV8-61A0A075B6I0 122 aa11.44□□□□□ -0.58
APP-215ENST00000474136 Q6JHZ5 121 aa11.44□□□□□ -0.58
APP-215ENST00000474136 C21orf62-AS1Q17RA5 79 aa11.43□□□□□ -0.58
APP-215ENST00000474136 SSBP3-AS1Q7Z2R9 100 aa11.43□□□□□ -0.58
APP-215ENST00000474136 IGLV9-49A0A0B4J1Y8 123 aa11.42□□□□□ -0.58
APP-215ENST00000474136 TEN1Q86WV5 123 aa11.42□□□□□ -0.58
APP-215ENST00000474136 Q8NBF4 154 aa11.42□□□□□ -0.58
APP-215ENST00000474136 OBSCN-AS1Q96MR7 158 aa11.42□□□□□ -0.58
APP-215ENST00000474136 PDE6GP18545 87 aa11.41□□□□□ -0.58
APP-215ENST00000474136 KRTAP13-3Q3SY46 172 aa11.41□□□□□ -0.58
APP-215ENST00000474136 C9orf153Q5TBE3 101 aa11.41□□□□□ -0.58
APP-215ENST00000474136 DSCR8Q96T75 97 aa11.41□□□□□ -0.58
APP-215ENST00000474136 MOBPQ13875 183 aa11.38□□□□□ -0.59
APP-215ENST00000474136 ETDBQ3ZM63 59 aa11.38□□□□□ -0.59
APP-215ENST00000474136 FP248Q71RG6 208 aaPredicted RBP11.38□□□□□ -0.59
APP-215ENST00000474136 TRBV7-4A0A0J9YYF1 115 aa11.35□□□□□ -0.59
APP-215ENST00000474136 LOC110117498A0A087WWA1 95 aa11.35□□□□□ -0.59
APP-215ENST00000474136 SPAG11AQ6PDA7 123 aa11.35□□□□□ -0.59
APP-215ENST00000474136 A0A1B0GV72 72 aa11.33□□□□□ -0.6
APP-215ENST00000474136 SEC61BP60468 96 aaKnown RBP11.33□□□□□ -0.6
APP-215ENST00000474136 IGFL1Q6UW32 110 aa11.33□□□□□ -0.6
APP-215ENST00000474136 LCE2CQ5TA81 110 aa11.32□□□□□ -0.6
APP-215ENST00000474136 C14orf132Q9NPU4 83 aa11.32□□□□□ -0.6
APP-215ENST00000474136 CD164Q04900 197 aa11.31□□□□□ -0.6
APP-215ENST00000474136 A0A1B0GW54 56 aa11.29□□□□□ -0.6
APP-215ENST00000474136 C4orf48Q5BLP8 95 aa11.29□□□□□ -0.6
APP-215ENST00000474136 Q6Q795 121 aa11.29□□□□□ -0.6
APP-215ENST00000474136 Q6ZQT0 140 aa11.29□□□□□ -0.6
APP-215ENST00000474136 CCKP06307 115 aa11.28□□□□□ -0.6
APP-215ENST00000474136 SPINK1P00995 79 aa11.23□□□□□ -0.61
APP-215ENST00000474136 J3QR89 54 aa11.22□□□□□ -0.61
APP-215ENST00000474136 VPS25Q9BRG1 176 aa11.22□□□□□ -0.61
APP-215ENST00000474136 A0A1W2PNM2 257 aa11.21□□□□□ -0.61
APP-215ENST00000474136 KRTAP19-2Q3LHN2 52 aa11.21□□□□□ -0.61
APP-215ENST00000474136 MT1HP80294 61 aa11.2□□□□□ -0.62
APP-215ENST00000474136 A0A0G2JQZ4 141 aa11.19□□□□□ -0.62
APP-215ENST00000474136 TRBV7-7A0A0K0K1E9 115 aa11.19□□□□□ -0.62
APP-215ENST00000474136 RPS29P62273 56 aaKnown RBP11.19□□□□□ -0.62
APP-215ENST00000474136 ACYP1P07311 99 aa11.17□□□□□ -0.62
APP-215ENST00000474136 SS18L2Q9UHA2 77 aa11.17□□□□□ -0.62
APP-215ENST00000474136 XP32Q5T750 250 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms