RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 RBM3P98179 157 aaKnown RBP6.24□□□□□ -1.41
PRPF38A-202ENST00000474048 C21orf62-AS1Q17RA5 79 aa6.24□□□□□ -1.41
PRPF38A-202ENST00000474048 ETDBQ3ZM63 59 aa6.24□□□□□ -1.41
PRPF38A-202ENST00000474048 Q8N377 158 aa6.24□□□□□ -1.41
PRPF38A-202ENST00000474048 J3QR89 54 aa6.23□□□□□ -1.41
PRPF38A-202ENST00000474048 IGLV9-49A0A0B4J1Y8 123 aa6.22□□□□□ -1.41
PRPF38A-202ENST00000474048 SPRR1BP22528 89 aa6.22□□□□□ -1.41
PRPF38A-202ENST00000474048 C3orf22Q8N5N4 141 aa6.22□□□□□ -1.41
PRPF38A-202ENST00000474048 PDE6GP18545 87 aa6.21□□□□□ -1.42
PRPF38A-202ENST00000474048 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
PRPF38A-202ENST00000474048 LINC01600Q96MT4 127 aa6.21□□□□□ -1.42
PRPF38A-202ENST00000474048 LINC00483Q53H64 154 aa6.2□□□□□ -1.42
PRPF38A-202ENST00000474048 Q8N1X5 172 aa6.2□□□□□ -1.42
PRPF38A-202ENST00000474048 VPS25Q9BRG1 176 aa6.2□□□□□ -1.42
PRPF38A-202ENST00000474048 C14orf132Q9NPU4 83 aa6.2□□□□□ -1.42
PRPF38A-202ENST00000474048 CRYGAP11844 174 aa6.19□□□□□ -1.42
PRPF38A-202ENST00000474048 FAM229BQ4G0N7 80 aa6.19□□□□□ -1.42
PRPF38A-202ENST00000474048 Q6JHZ5 121 aa6.19□□□□□ -1.42
PRPF38A-202ENST00000474048 Q8NBF4 154 aa6.19□□□□□ -1.42
PRPF38A-202ENST00000474048 PKHD1P08F94 4074 aa6.18□□□□□ -1.42
PRPF38A-202ENST00000474048 MOBPQ13875 183 aa6.18□□□□□ -1.42
PRPF38A-202ENST00000474048 K7ERU9 68 aa6.16□□□□□ -1.42
PRPF38A-202ENST00000474048 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
PRPF38A-202ENST00000474048 DYNC1H1Q14204 4646 aaKnown RBP6.16□□□□□ -1.42
PRPF38A-202ENST00000474048 LRP1BQ9NZR2 4599 aa6.15□□□□□ -1.42
PRPF38A-202ENST00000474048 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
PRPF38A-202ENST00000474048 CCKP06307 115 aa6.15□□□□□ -1.42
PRPF38A-202ENST00000474048 SMIM29Q86T20 159 aa6.15□□□□□ -1.42
PRPF38A-202ENST00000474048 OBSCN-AS1Q96MR7 158 aa6.15□□□□□ -1.42
PRPF38A-202ENST00000474048 DNAH8Q96JB1 4490 aa6.15□□□□□ -1.43
PRPF38A-202ENST00000474048 TYMSOSQ8TAI1 123 aa6.14□□□□□ -1.43
PRPF38A-202ENST00000474048 IGLV8-61A0A075B6I0 122 aa6.13□□□□□ -1.43
PRPF38A-202ENST00000474048 TRBV7-4A0A0J9YYF1 115 aa6.13□□□□□ -1.43
PRPF38A-202ENST00000474048 SSBP3-AS1Q7Z2R9 100 aa6.13□□□□□ -1.43
PRPF38A-202ENST00000474048 ACYP1P07311 99 aa6.12□□□□□ -1.43
PRPF38A-202ENST00000474048 KRTAP10-4P60372 401 aaPredicted RBP6.12□□□□□ -1.43
PRPF38A-202ENST00000474048 IGFL1Q6UW32 110 aa6.12□□□□□ -1.43
PRPF38A-202ENST00000474048 Q6ZQT0 140 aa6.12□□□□□ -1.43
PRPF38A-202ENST00000474048 KRTAP1-4P0C5Y4 121 aa6.1□□□□□ -1.43
PRPF38A-202ENST00000474048 A0A087X002 238 aa6.09□□□□□ -1.43
PRPF38A-202ENST00000474048 A0A1B0GW54 56 aa6.09□□□□□ -1.43
PRPF38A-202ENST00000474048 HRCT1Q6UXD1 115 aa6.09□□□□□ -1.43
PRPF38A-202ENST00000474048 PRR26Q8N8Z3 221 aa6.09□□□□□ -1.43
PRPF38A-202ENST00000474048 UBL5Q9BZL1 73 aa6.09□□□□□ -1.43
PRPF38A-202ENST00000474048 SS18L2Q9UHA2 77 aa6.09□□□□□ -1.43
PRPF38A-202ENST00000474048 FAM240AA0A1B0GVK7 77 aa6.08□□□□□ -1.44
PRPF38A-202ENST00000474048 APOBP04114 4563 aaKnown RBP6.07□□□□□ -1.44
PRPF38A-202ENST00000474048 LIMD2Q9BT23 127 aa6.07□□□□□ -1.44
PRPF38A-202ENST00000474048 CD164Q04900 197 aa6.06□□□□□ -1.44
PRPF38A-202ENST00000474048 KRTAP13-2Q52LG2 175 aa6.06□□□□□ -1.44
PRPF38A-202ENST00000474048 SPAG11AQ6PDA7 123 aa6.06□□□□□ -1.44
PRPF38A-202ENST00000474048 Q6Q795 121 aa6.06□□□□□ -1.44
PRPF38A-202ENST00000474048 LINC00304Q8N9R0 145 aa6.06□□□□□ -1.44
PRPF38A-202ENST00000474048 A0A087WSZ3 146 aa6.05□□□□□ -1.44
PRPF38A-202ENST00000474048 A0A0G2JQZ4 141 aa6.05□□□□□ -1.44
PRPF38A-202ENST00000474048 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
PRPF38A-202ENST00000474048 A0A1W2PNM2 257 aa6.05□□□□□ -1.44
PRPF38A-202ENST00000474048 NREPQ16612 68 aa6.05□□□□□ -1.44
PRPF38A-202ENST00000474048 KRTAP4-6Q9BYQ5 205 aa6.05□□□□□ -1.44
PRPF38A-202ENST00000474048 TRBV7-7A0A0K0K1E9 115 aa6.04□□□□□ -1.44
PRPF38A-202ENST00000474048 SPINK1P00995 79 aa6.03□□□□□ -1.44
PRPF38A-202ENST00000474048 EPPK1P58107 5090 aaKnown RBP6.03□□□□□ -1.44
PRPF38A-202ENST00000474048 SRRM2Q9UQ35 2752 aaKnown RBP6.02□□□□□ -1.45
PRPF38A-202ENST00000474048 OXTP01178 125 aa6.02□□□□□ -1.45
PRPF38A-202ENST00000474048 LINC00846Q9NV44 126 aa6□□□□□ -1.45
PRPF38A-202ENST00000474048 RYR1P21817 5038 aa6□□□□□ -1.45
PRPF38A-202ENST00000474048 VPS13BQ7Z7G8 4022 aa6□□□□□ -1.45
PRPF38A-202ENST00000474048 Q6ZVQ6 151 aa5.99□□□□□ -1.45
PRPF38A-202ENST00000474048 BPY2O14599 106 aa5.98□□□□□ -1.45
PRPF38A-202ENST00000474048 RPS29P62273 56 aaKnown RBP5.98□□□□□ -1.45
PRPF38A-202ENST00000474048 ATP5EP2Q5VTU8 51 aa5.98□□□□□ -1.45
PRPF38A-202ENST00000474048 J3KT08 172 aa5.97□□□□□ -1.45
PRPF38A-202ENST00000474048 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
PRPF38A-202ENST00000474048 SIGMAR1Q99720 223 aa5.97□□□□□ -1.45
PRPF38A-202ENST00000474048 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
PRPF38A-202ENST00000474048 H3BS24 57 aa5.96□□□□□ -1.46
PRPF38A-202ENST00000474048 HSPG2P98160 4391 aa5.96□□□□□ -1.46
PRPF38A-202ENST00000474048 NDUFB1O75438 58 aa5.95□□□□□ -1.46
PRPF38A-202ENST00000474048 IGKV4-1P06312 121 aa5.94□□□□□ -1.46
PRPF38A-202ENST00000474048 KRTAP17-1Q9BYP8 105 aa5.94□□□□□ -1.46
PRPF38A-202ENST00000474048 FAT1Q14517 4588 aa5.94□□□□□ -1.46
PRPF38A-202ENST00000474048 KRTAP29-1A8MX34 341 aaPredicted RBP5.93□□□□□ -1.46
PRPF38A-202ENST00000474048 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
PRPF38A-202ENST00000474048 CXCL6P80162 114 aa5.93□□□□□ -1.46
PRPF38A-202ENST00000474048 ASB16-AS1Q495Z4 193 aa5.93□□□□□ -1.46
PRPF38A-202ENST00000474048 Q5XG85 94 aa5.93□□□□□ -1.46
PRPF38A-202ENST00000474048 BIRC6Q9NR09 4857 aa5.93□□□□□ -1.46
PRPF38A-202ENST00000474048 IGKV3D-7A0A0C4DH55 119 aa5.92□□□□□ -1.46
PRPF38A-202ENST00000474048 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
PRPF38A-202ENST00000474048 HIST1H4AP62805 103 aaKnown RBP5.91□□□□□ -1.46
PRPF38A-202ENST00000474048 DEFB116Q30KQ4 102 aa5.91□□□□□ -1.46
PRPF38A-202ENST00000474048 CDIP1Q9H305 208 aa5.91□□□□□ -1.46
PRPF38A-202ENST00000474048 FLG2Q5D862 2391 aaPredicted RBP5.89□□□□□ -1.47
PRPF38A-202ENST00000474048 LINC00472Q9H8W2 130 aa5.88□□□□□ -1.47
PRPF38A-202ENST00000474048 A8MWP4 228 aa5.87□□□□□ -1.47
PRPF38A-202ENST00000474048 C1orf195Q5TG92 126 aa5.87□□□□□ -1.47
PRPF38A-202ENST00000474048 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
PRPF38A-202ENST00000474048 IGHV6-1A0A0B4J1U7 121 aa5.85□□□□□ -1.47
PRPF38A-202ENST00000474048 MT-ATP8P03928 68 aa5.85□□□□□ -1.47
PRPF38A-202ENST00000474048 Q96NJ1 140 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms