RNA–Protein interactions for RNA: ENST00000473322.1

CCDC66-215, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-215ENST00000473322 DDX60LQ5H9U9 1706 aaKnown RBP-0.15□□□□□ -2.43
CCDC66-215ENST00000473322 LMTK2Q8IWU2 1503 aa-0.15□□□□□ -2.43
CCDC66-215ENST00000473322 HFM1A2PYH4 1435 aa-0.15□□□□□ -2.43
CCDC66-215ENST00000473322 RICTORQ6R327 1708 aa-0.16□□□□□ -2.43
CCDC66-215ENST00000473322 RNF17Q9BXT8 1623 aaKnown RBP-0.16□□□□□ -2.43
CCDC66-215ENST00000473322 PDCD5O14737 125 aa-0.17□□□□□ -2.44
CCDC66-215ENST00000473322 SPRR2AP35326 72 aa-0.17□□□□□ -2.44
CCDC66-215ENST00000473322 PDE4DIPQ5VU43 2346 aa-0.17□□□□□ -2.44
CCDC66-215ENST00000473322 UGGT2Q9NYU1 1516 aa-0.18□□□□□ -2.44
CCDC66-215ENST00000473322 H0YGG7 62 aa-0.18□□□□□ -2.44
CCDC66-215ENST00000473322 UBL5Q9BZL1 73 aa-0.18□□□□□ -2.44
CCDC66-215ENST00000473322 DUOX2Q9NRD8 1548 aa-0.18□□□□□ -2.44
CCDC66-215ENST00000473322 KRTAP6-1Q3LI64 71 aa-0.19□□□□□ -2.44
CCDC66-215ENST00000473322 HECTD1Q9ULT8 2610 aa-0.2□□□□□ -2.44
CCDC66-215ENST00000473322 MYO5CQ9NQX4 1742 aa-0.2□□□□□ -2.44
CCDC66-215ENST00000473322 PKHD1P08F94 4074 aa-0.2□□□□□ -2.44
CCDC66-215ENST00000473322 LRRIQ1Q96JM4 1722 aa-0.21□□□□□ -2.44
CCDC66-215ENST00000473322 ITSN1Q15811 1721 aa-0.21□□□□□ -2.44
CCDC66-215ENST00000473322 PRRC2CQ9Y520 2896 aaKnown RBP-0.22□□□□□ -2.44
CCDC66-215ENST00000473322 INO80Q9ULG1 1556 aaPredicted RBP-0.22□□□□□ -2.44
CCDC66-215ENST00000473322 DSPP15924 2871 aaKnown RBP-0.22□□□□□ -2.44
CCDC66-215ENST00000473322 PKD1P98161 4303 aa-0.22□□□□□ -2.45
CCDC66-215ENST00000473322 CDC42BPGQ6DT37 1551 aa-0.23□□□□□ -2.45
CCDC66-215ENST00000473322 IQGAP3Q86VI3 1631 aa-0.23□□□□□ -2.45
CCDC66-215ENST00000473322 PARP4Q9UKK3 1724 aaKnown RBP-0.23□□□□□ -2.45
CCDC66-215ENST00000473322 H3BVH4 76 aa-0.23□□□□□ -2.45
CCDC66-215ENST00000473322 ENHOQ6UWT2 76 aa-0.23□□□□□ -2.45
CCDC66-215ENST00000473322 DIP2AQ14689 1571 aa-0.23□□□□□ -2.45
CCDC66-215ENST00000473322 ZC3H13Q5T200 1668 aaKnown RBP-0.24□□□□□ -2.45
CCDC66-215ENST00000473322 TJP1Q07157 1748 aa-0.24□□□□□ -2.45
CCDC66-215ENST00000473322 DSTQ03001 7570 aaKnown RBP-0.24□□□□□ -2.45
CCDC66-215ENST00000473322 ATXN8Q156A1 80 aa-0.24□□□□□ -2.45
CCDC66-215ENST00000473322 DEFB114Q30KQ6 69 aa-0.24□□□□□ -2.45
CCDC66-215ENST00000473322 TNRC18O15417 2968 aaPredicted RBP-0.25□□□□□ -2.45
CCDC66-215ENST00000473322 CREBBPQ92793 2442 aa-0.26□□□□□ -2.45
CCDC66-215ENST00000473322 FLGP20930 4061 aaPredicted RBP-0.26□□□□□ -2.45
CCDC66-215ENST00000473322 NHSQ6T4R5 1651 aa-0.27□□□□□ -2.45
CCDC66-215ENST00000473322 LYSTQ99698 3801 aa-0.27□□□□□ -2.45
CCDC66-215ENST00000473322 STAB2Q8WWQ8 2551 aa-0.27□□□□□ -2.45
CCDC66-215ENST00000473322 DEFB130BP0DP73 79 aa-0.27□□□□□ -2.45
CCDC66-215ENST00000473322 DEFB130AP0DP74 79 aa-0.27□□□□□ -2.45
CCDC66-215ENST00000473322 PDZD2O15018 2839 aa-0.27□□□□□ -2.45
CCDC66-215ENST00000473322 TGP01266 2768 aa-0.27□□□□□ -2.45
CCDC66-215ENST00000473322 SRRM2Q9UQ35 2752 aaKnown RBP-0.27□□□□□ -2.45
CCDC66-215ENST00000473322 NBEAL1Q6ZS30 2694 aa-0.27□□□□□ -2.45
CCDC66-215ENST00000473322 ASXL1Q8IXJ9 1541 aa-0.28□□□□□ -2.45
CCDC66-215ENST00000473322 SVEP1Q4LDE5 3571 aa-0.28□□□□□ -2.45
CCDC66-215ENST00000473322 ETDCA0A1B0GVM5 59 aa-0.28□□□□□ -2.45
CCDC66-215ENST00000473322 IAPPP10997 89 aa-0.28□□□□□ -2.45
CCDC66-215ENST00000473322 KRTAP6-2Q3LI66 62 aa-0.28□□□□□ -2.45
CCDC66-215ENST00000473322 NBASA2RRP1 2371 aa-0.28□□□□□ -2.45
CCDC66-215ENST00000473322 CRIP1P50238 77 aa-0.29□□□□□ -2.46
CCDC66-215ENST00000473322 SETD2Q9BYW2 2564 aaPredicted RBP-0.3□□□□□ -2.46
CCDC66-215ENST00000473322 DEFA5Q01523 94 aa-0.3□□□□□ -2.46
CCDC66-215ENST00000473322 BPTFQ12830 3046 aa-0.3□□□□□ -2.46
CCDC66-215ENST00000473322 MUC2Q02817 5179 aa-0.31□□□□□ -2.46
CCDC66-215ENST00000473322 KIAA0586Q9BVV6 1533 aa-0.31□□□□□ -2.46
CCDC66-215ENST00000473322 PRLHP81277 87 aa-0.31□□□□□ -2.46
CCDC66-215ENST00000473322 NF1P21359 2839 aa-0.32□□□□□ -2.46
CCDC66-215ENST00000473322 C9orf92A6NGG3 77 aa-0.32□□□□□ -2.46
CCDC66-215ENST00000473322 SPRR2EP22531 72 aa-0.32□□□□□ -2.46
CCDC66-215ENST00000473322 ABCA9Q8IUA7 1624 aa-0.32□□□□□ -2.46
CCDC66-215ENST00000473322 NRAPQ86VF7 1730 aa-0.33□□□□□ -2.46
CCDC66-215ENST00000473322 HILPDAQ9Y5L2 63 aa-0.34□□□□□ -2.46
CCDC66-215ENST00000473322 ZZEF1O43149 2961 aa-0.35□□□□□ -2.47
CCDC66-215ENST00000473322 SPTBN4Q9H254 2564 aa-0.36□□□□□ -2.47
CCDC66-215ENST00000473322 NBPF19A0A087WUL8 3843 aa-0.36□□□□□ -2.47
CCDC66-215ENST00000473322 SONP18583 2426 aaKnown RBP-0.36□□□□□ -2.47
CCDC66-215ENST00000473322 MUC12Q9UKN1 5478 aa-0.37□□□□□ -2.47
CCDC66-215ENST00000473322 EFCAB5A4FU69 1503 aa-0.38□□□□□ -2.47
CCDC66-215ENST00000473322 C3P01024 1663 aa-0.39□□□□□ -2.47
CCDC66-215ENST00000473322 MT1AP04731 61 aa-0.39□□□□□ -2.47
CCDC66-215ENST00000473322 GNG13Q9P2W3 67 aa-0.39□□□□□ -2.47
CCDC66-215ENST00000473322 AKAP9Q99996 3911 aa-0.39□□□□□ -2.47
CCDC66-215ENST00000473322 FAT3Q8TDW7 4589 aa-0.4□□□□□ -2.47
CCDC66-215ENST00000473322 DNAH9Q9NYC9 4486 aa-0.41□□□□□ -2.48
CCDC66-215ENST00000473322 HTTP42858 3142 aa-0.41□□□□□ -2.48
CCDC66-215ENST00000473322 LAMA5O15230 3695 aa-0.41□□□□□ -2.48
CCDC66-215ENST00000473322 ITSN2Q9NZM3 1697 aa-0.42□□□□□ -2.48
CCDC66-215ENST00000473322 VPS13BQ7Z7G8 4022 aa-0.42□□□□□ -2.48
CCDC66-215ENST00000473322 ABCC6O95255 1503 aa-0.43□□□□□ -2.48
CCDC66-215ENST00000473322 S4R3F8 94 aa-0.43□□□□□ -2.48
CCDC66-215ENST00000473322 CUBNO60494 3623 aa-0.44□□□□□ -2.48
CCDC66-215ENST00000473322 DNMBPQ6XZF7 1577 aa-0.44□□□□□ -2.48
CCDC66-215ENST00000473322 MXRA5Q9NR99 2828 aa-0.44□□□□□ -2.48
CCDC66-215ENST00000473322 WT1-ASQ06250 92 aa-0.44□□□□□ -2.48
CCDC66-215ENST00000473322 EPG5Q9HCE0 2579 aa-0.44□□□□□ -2.48
CCDC66-215ENST00000473322 DOPEY1Q5JWR5 2465 aa-0.44□□□□□ -2.48
CCDC66-215ENST00000473322 KMT2CQ8NEZ4 4911 aaKnown RBP-0.45□□□□□ -2.48
CCDC66-215ENST00000473322 A0A087WWC5 75 aa-0.45□□□□□ -2.48
CCDC66-215ENST00000473322 H3BNG1 76 aa-0.45□□□□□ -2.48
CCDC66-215ENST00000473322 KRTAP19-7Q3SYF9 63 aa-0.45□□□□□ -2.48
CCDC66-215ENST00000473322 DMXL1Q9Y485 3027 aa-0.46□□□□□ -2.48
CCDC66-215ENST00000473322 SPG11Q96JI7 2443 aa-0.46□□□□□ -2.48
CCDC66-215ENST00000473322 DNAH6Q9C0G6 4158 aa-0.46□□□□□ -2.48
CCDC66-215ENST00000473322 K7EMI3 77 aa-0.46□□□□□ -2.48
CCDC66-215ENST00000473322 MINOS1Q5TGZ0 78 aa-0.46□□□□□ -2.48
CCDC66-215ENST00000473322 PCLOQ9Y6V0 5065 aa-0.47□□□□□ -2.48
CCDC66-215ENST00000473322 RPS27P42677 84 aaKnown RBP-0.47□□□□□ -2.48
CCDC66-215ENST00000473322 RPS27LQ71UM5 84 aaKnown RBP-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms