RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 MPLKIPQ8TAP9 179 aa13.36□□□□□ -0.27
COL18A1-207ENST00000473212 DNAH7Q8WXX0 4024 aa13.35□□□□□ -0.27
COL18A1-207ENST00000473212 PRLHP81277 87 aa13.34□□□□□ -0.27
COL18A1-207ENST00000473212 A0A096LNI7 61 aa13.33□□□□□ -0.28
COL18A1-207ENST00000473212 PRO0628Q9UI54 55 aa13.33□□□□□ -0.28
COL18A1-207ENST00000473212 DEFB116Q30KQ4 102 aa13.32□□□□□ -0.28
COL18A1-207ENST00000473212 IGFL1Q6UW32 110 aa13.32□□□□□ -0.28
COL18A1-207ENST00000473212 PSCAO43653 123 aa13.31□□□□□ -0.28
COL18A1-207ENST00000473212 HCG22E2RYF7 251 aa13.3□□□□□ -0.28
COL18A1-207ENST00000473212 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.28□□□□□ -0.28
COL18A1-207ENST00000473212 ZCCHC13Q8WW36 166 aaKnown RBP13.28□□□□□ -0.28
COL18A1-207ENST00000473212 KRTAP11-1Q8IUC1 163 aa13.27□□□□□ -0.29
COL18A1-207ENST00000473212 CHTF8P0CG12 524 aa13.26□□□□□ -0.29
COL18A1-207ENST00000473212 A0A087WSZ3 146 aa13.24□□□□□ -0.29
COL18A1-207ENST00000473212 C16orf90A8MZG2 172 aa13.22□□□□□ -0.29
COL18A1-207ENST00000473212 WFDC13Q8IUB5 93 aa13.22□□□□□ -0.29
COL18A1-207ENST00000473212 hDV103S1A0JD37 113 aa13.22□□□□□ -0.29
COL18A1-207ENST00000473212 LRCOL1A6NCL2 159 aa13.21□□□□□ -0.29
COL18A1-207ENST00000473212 BRK1Q8WUW1 75 aa13.21□□□□□ -0.29
COL18A1-207ENST00000473212 RPL37AP61513 92 aaKnown RBP13.19□□□□□ -0.3
COL18A1-207ENST00000473212 C1orf64Q8NEQ6 169 aa13.19□□□□□ -0.3
COL18A1-207ENST00000473212 IGLV8-61A0A075B6I0 122 aa13.19□□□□□ -0.3
COL18A1-207ENST00000473212 PHF5AQ7RTV0 110 aaKnown RBP13.18□□□□□ -0.3
COL18A1-207ENST00000473212 UBE2AP49459 152 aa13.18□□□□□ -0.3
COL18A1-207ENST00000473212 PRR4Q16378 134 aa13.17□□□□□ -0.3
COL18A1-207ENST00000473212 CNBPP62633 177 aaKnown RBP13.15□□□□□ -0.3
COL18A1-207ENST00000473212 PLECQ15149 4684 aaKnown RBP13.14□□□□□ -0.31
COL18A1-207ENST00000473212 UBE2DNLQ8IWF7 75 aa13.11□□□□□ -0.31
COL18A1-207ENST00000473212 PKIGQ9Y2B9 76 aa13.09□□□□□ -0.31
COL18A1-207ENST00000473212 MP68P56378 58 aa13.08□□□□□ -0.32
COL18A1-207ENST00000473212 KRTAP29-1A8MX34 341 aaPredicted RBP13.08□□□□□ -0.32
COL18A1-207ENST00000473212 PANO1I0J062 215 aa13.07□□□□□ -0.32
COL18A1-207ENST00000473212 LINC00208Q96KT6 92 aa13.07□□□□□ -0.32
COL18A1-207ENST00000473212 CYP4F30PQ9H0H9 118 aa13.07□□□□□ -0.32
COL18A1-207ENST00000473212 NDUFB1O75438 58 aa13.05□□□□□ -0.32
COL18A1-207ENST00000473212 APLNQ9ULZ1 77 aa13.05□□□□□ -0.32
COL18A1-207ENST00000473212 TRAV22A0A0B4J277 110 aa13.04□□□□□ -0.32
COL18A1-207ENST00000473212 CASC2Q6XLA1 102 aa13.04□□□□□ -0.32
COL18A1-207ENST00000473212 Q1T7F1 81 aa13.03□□□□□ -0.32
COL18A1-207ENST00000473212 PRR15Q8IV56 129 aa13.03□□□□□ -0.32
COL18A1-207ENST00000473212 SPRR1BP22528 89 aa13.03□□□□□ -0.32
COL18A1-207ENST00000473212 H0Y9J4 135 aa13.01□□□□□ -0.33
COL18A1-207ENST00000473212 LINC00472Q9H8W2 130 aa13.01□□□□□ -0.33
COL18A1-207ENST00000473212 H0Y9P7 68 aa13□□□□□ -0.33
COL18A1-207ENST00000473212 DYNC2H1Q8NCM8 4307 aaKnown RBP13□□□□□ -0.33
COL18A1-207ENST00000473212 A8MWP4 228 aa12.99□□□□□ -0.33
COL18A1-207ENST00000473212 C14orf177Q52M58 125 aa12.98□□□□□ -0.33
COL18A1-207ENST00000473212 PSPHP1O15172 72 aa12.96□□□□□ -0.33
COL18A1-207ENST00000473212 MDFIQ99750 246 aa12.96□□□□□ -0.33
COL18A1-207ENST00000473212 B9D2Q9BPU9 175 aa12.95□□□□□ -0.34
COL18A1-207ENST00000473212 C9orf163Q8N9P6 203 aa12.95□□□□□ -0.34
COL18A1-207ENST00000473212 STARD9Q9P2P6 4700 aa12.94□□□□□ -0.34
COL18A1-207ENST00000473212 FRAS1Q86XX4 4008 aa12.93□□□□□ -0.34
COL18A1-207ENST00000473212 H3BPC8 53 aa12.9□□□□□ -0.34
COL18A1-207ENST00000473212 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.89□□□□□ -0.35
COL18A1-207ENST00000473212 NBDYA0A0U1RRE5 68 aa12.88□□□□□ -0.35
COL18A1-207ENST00000473212 MMP24-AS1A0A0U1RRL7 71 aa12.88□□□□□ -0.35
COL18A1-207ENST00000473212 SPANXA2-OT1Q8N9U9 137 aa12.88□□□□□ -0.35
COL18A1-207ENST00000473212 Q6ZRN7 208 aaPredicted RBP12.87□□□□□ -0.35
COL18A1-207ENST00000473212 KMT2AQ03164 3969 aa12.86□□□□□ -0.35
COL18A1-207ENST00000473212 KRTAP13-1Q8IUC0 172 aa12.86□□□□□ -0.35
COL18A1-207ENST00000473212 C1orf195Q5TG92 126 aa12.86□□□□□ -0.35
COL18A1-207ENST00000473212 IGLV9-49A0A0B4J1Y8 123 aa12.84□□□□□ -0.35
COL18A1-207ENST00000473212 HECTD4Q9Y4D8 3996 aa12.84□□□□□ -0.35
COL18A1-207ENST00000473212 A8MUN3 132 aa12.83□□□□□ -0.36
COL18A1-207ENST00000473212 PRKDCP78527 4128 aaKnown RBP12.82□□□□□ -0.36
COL18A1-207ENST00000473212 Q96NJ1 140 aa12.79□□□□□ -0.36
COL18A1-207ENST00000473212 V9GYY9 64 aa12.79□□□□□ -0.36
COL18A1-207ENST00000473212 VPS13DQ5THJ4 4388 aa12.78□□□□□ -0.36
COL18A1-207ENST00000473212 DNAH8Q96JB1 4490 aa12.78□□□□□ -0.36
COL18A1-207ENST00000473212 ANAPC11Q9NYG5 84 aa12.77□□□□□ -0.37
COL18A1-207ENST00000473212 DNAH2Q9P225 4427 aa12.77□□□□□ -0.37
COL18A1-207ENST00000473212 TGP01266 2768 aa12.75□□□□□ -0.37
COL18A1-207ENST00000473212 SPACA4Q8TDM5 124 aa12.75□□□□□ -0.37
COL18A1-207ENST00000473212 Q8N9P0 234 aaPredicted RBP12.74□□□□□ -0.37
COL18A1-207ENST00000473212 Q5VV11 94 aa12.73□□□□□ -0.37
COL18A1-207ENST00000473212 PCOTHQ58A44 107 aa12.72□□□□□ -0.37
COL18A1-207ENST00000473212 MOBPQ13875 183 aa12.71□□□□□ -0.37
COL18A1-207ENST00000473212 ASB16-AS1Q495Z4 193 aa12.7□□□□□ -0.38
COL18A1-207ENST00000473212 FBN3Q75N90 2809 aa12.7□□□□□ -0.38
COL18A1-207ENST00000473212 IGLV7-46A0A075B6I9 117 aa12.69□□□□□ -0.38
COL18A1-207ENST00000473212 C8orf17Q9NRJ1 99 aa12.69□□□□□ -0.38
COL18A1-207ENST00000473212 COA5Q86WW8 74 aa12.68□□□□□ -0.38
COL18A1-207ENST00000473212 DNAH17Q9UFH2 4485 aa12.68□□□□□ -0.38
COL18A1-207ENST00000473212 IGHV6-1A0A0B4J1U7 121 aa12.67□□□□□ -0.38
COL18A1-207ENST00000473212 LINC00483Q53H64 154 aa12.67□□□□□ -0.38
COL18A1-207ENST00000473212 A8MU10 97 aa12.67□□□□□ -0.38
COL18A1-207ENST00000473212 TP53AIP1Q9HCN2 124 aa12.67□□□□□ -0.38
COL18A1-207ENST00000473212 DNHD1Q96M86 4753 aa12.67□□□□□ -0.38
COL18A1-207ENST00000473212 A0A087WTM6 91 aa12.66□□□□□ -0.38
COL18A1-207ENST00000473212 LIMD2Q9BT23 127 aa12.66□□□□□ -0.38
COL18A1-207ENST00000473212 NUPR2A6NF83 97 aa12.65□□□□□ -0.38
COL18A1-207ENST00000473212 CD164Q04900 197 aa12.65□□□□□ -0.38
COL18A1-207ENST00000473212 PRR15LQ9BU68 103 aa12.65□□□□□ -0.38
COL18A1-207ENST00000473212 PSORS1C2Q9UIG4 136 aa12.65□□□□□ -0.38
COL18A1-207ENST00000473212 NDUFS5O43920 106 aa12.65□□□□□ -0.38
COL18A1-207ENST00000473212 CHKB-CPT1BH3BT56 60 aa12.63□□□□□ -0.39
COL18A1-207ENST00000473212 WWC2-AS2Q96NR7 200 aa12.63□□□□□ -0.39
COL18A1-207ENST00000473212 MEGF8Q7Z7M0 2845 aa12.63□□□□□ -0.39
COL18A1-207ENST00000473212 A0A1B0GVX0 72 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms