RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 HINT1P49773 126 aaPredicted RBP4.32□□□□□ -1.72
USP48-207ENST00000471752 COA6Q5JTJ3 125 aaKnown RBP4.32□□□□□ -1.72
USP48-207ENST00000471752 TEX49A0A1B0GTD5 131 aa4.31□□□□□ -1.72
USP48-207ENST00000471752 A6NDN8 102 aa4.31□□□□□ -1.72
USP48-207ENST00000471752 SMIM11BQ8TCY0 68 aa4.31□□□□□ -1.72
USP48-207ENST00000471752 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
USP48-207ENST00000471752 IGLV5-48A0A075B6I7 105 aa4.3□□□□□ -1.72
USP48-207ENST00000471752 SCGB1D4Q6XE38 83 aa4.3□□□□□ -1.72
USP48-207ENST00000471752 PRO1933Q9H354 126 aa4.3□□□□□ -1.72
USP48-207ENST00000471752 TRBV7-6A0A0J9YX20 115 aa4.29□□□□□ -1.72
USP48-207ENST00000471752 AKR1D1P51857 326 aa4.29□□□□□ -1.72
USP48-207ENST00000471752 USH2AO75445 5202 aa4.28□□□□□ -1.72
USP48-207ENST00000471752 KRTAP10-6P60371 365 aaPredicted RBP4.28□□□□□ -1.72
USP48-207ENST00000471752 CD164Q04900 197 aa4.28□□□□□ -1.72
USP48-207ENST00000471752 LIMD2Q9BT23 127 aa4.28□□□□□ -1.72
USP48-207ENST00000471752 A0A1B0GWB2 263 aa4.27□□□□□ -1.73
USP48-207ENST00000471752 IFITM1P13164 125 aa4.27□□□□□ -1.73
USP48-207ENST00000471752 Q5XG85 94 aa4.27□□□□□ -1.73
USP48-207ENST00000471752 SLC25A34Q6PIV7 304 aa4.27□□□□□ -1.73
USP48-207ENST00000471752 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
USP48-207ENST00000471752 RPL37P61927 97 aaKnown RBP4.26□□□□□ -1.73
USP48-207ENST00000471752 CBY1Q9Y3M2 126 aa4.26□□□□□ -1.73
USP48-207ENST00000471752 A4D1N5 150 aa4.25□□□□□ -1.73
USP48-207ENST00000471752 LINC00575Q6W349 94 aa4.25□□□□□ -1.73
USP48-207ENST00000471752 C12orf57Q99622 126 aa4.25□□□□□ -1.73
USP48-207ENST00000471752 HIST3H2BBQ8N257 126 aa4.24□□□□□ -1.73
USP48-207ENST00000471752 HIST1H2BLQ99880 126 aa4.24□□□□□ -1.73
USP48-207ENST00000471752 TRAV13-2A0A0B4J235 113 aa4.23□□□□□ -1.73
USP48-207ENST00000471752 IGFL1Q6UW32 110 aa4.23□□□□□ -1.73
USP48-207ENST00000471752 Q6ZQY7 126 aa4.23□□□□□ -1.73
USP48-207ENST00000471752 Q6ZVH6 145 aa4.23□□□□□ -1.73
USP48-207ENST00000471752 C20orf202A1L168 122 aa4.22□□□□□ -1.73
USP48-207ENST00000471752 H3BUT2 72 aa4.22□□□□□ -1.73
USP48-207ENST00000471752 hADV29S1A0JD25 119 aa4.21□□□□□ -1.74
USP48-207ENST00000471752 OCIAD2Q56VL3 154 aa4.21□□□□□ -1.74
USP48-207ENST00000471752 OBSCN-AS1Q96MR7 158 aa4.21□□□□□ -1.74
USP48-207ENST00000471752 TRBV7-7A0A0K0K1E9 115 aa4.2□□□□□ -1.74
USP48-207ENST00000471752 M0R2T5 61 aa4.2□□□□□ -1.74
USP48-207ENST00000471752 COPS9Q8WXC6 57 aa4.19□□□□□ -1.74
USP48-207ENST00000471752 FAM218AQ96MZ4 157 aa4.19□□□□□ -1.74
USP48-207ENST00000471752 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
USP48-207ENST00000471752 TCL1BO95988 128 aa4.18□□□□□ -1.74
USP48-207ENST00000471752 CFC1BP0CG36 223 aa4.18□□□□□ -1.74
USP48-207ENST00000471752 SNRPEP62304 92 aaKnown RBP4.18□□□□□ -1.74
USP48-207ENST00000471752 COX6B2Q6YFQ2 88 aa4.18□□□□□ -1.74
USP48-207ENST00000471752 CFC1P0CG37 223 aa4.17□□□□□ -1.74
USP48-207ENST00000471752 VAMP3Q15836 100 aa4.17□□□□□ -1.74
USP48-207ENST00000471752 Q6Q795 121 aa4.17□□□□□ -1.74
USP48-207ENST00000471752 NHP2Q9NX24 153 aaKnown RBP4.17□□□□□ -1.74
USP48-207ENST00000471752 F8WEM9 126 aa4.16□□□□□ -1.74
USP48-207ENST00000471752 CLEC2BQ92478 149 aa4.16□□□□□ -1.74
USP48-207ENST00000471752 C14orf144Q96I85 54 aa4.16□□□□□ -1.74
USP48-207ENST00000471752 SCGB1D1O95968 90 aa4.15□□□□□ -1.75
USP48-207ENST00000471752 S100A2P29034 98 aa4.15□□□□□ -1.75
USP48-207ENST00000471752 Q6JHZ5 121 aa4.15□□□□□ -1.75
USP48-207ENST00000471752 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.15□□□□□ -1.75
USP48-207ENST00000471752 Q96NJ1 140 aa4.15□□□□□ -1.75
USP48-207ENST00000471752 HIST1H4GQ99525 98 aa4.15□□□□□ -1.75
USP48-207ENST00000471752 COX8AP10176 69 aa4.14□□□□□ -1.75
USP48-207ENST00000471752 C2orf91Q6ZV80 131 aa4.14□□□□□ -1.75
USP48-207ENST00000471752 Q75L30 129 aa4.14□□□□□ -1.75
USP48-207ENST00000471752 SNHG12Q9BXW3 62 aa4.14□□□□□ -1.75
USP48-207ENST00000471752 HSBP1L1C9JCN9 74 aa4.13□□□□□ -1.75
USP48-207ENST00000471752 LST1O00453 97 aa4.12□□□□□ -1.75
USP48-207ENST00000471752 DSCR10P59022 87 aa4.12□□□□□ -1.75
USP48-207ENST00000471752 ATP11AUNQ6ZP68 121 aa4.12□□□□□ -1.75
USP48-207ENST00000471752 NOTCH2NLQ7Z3S9 236 aa4.12□□□□□ -1.75
USP48-207ENST00000471752 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
USP48-207ENST00000471752 A0A1W2PNM2 257 aa4.11□□□□□ -1.75
USP48-207ENST00000471752 A8MUU9 505 aa4.11□□□□□ -1.75
USP48-207ENST00000471752 NDUFV3P56181 108 aaKnown RBP4.11□□□□□ -1.75
USP48-207ENST00000471752 A0A087WSZ3 146 aa4.1□□□□□ -1.75
USP48-207ENST00000471752 A0A1B0GV72 72 aa4.1□□□□□ -1.75
USP48-207ENST00000471752 DLEU1O43261 78 aa4.1□□□□□ -1.75
USP48-207ENST00000471752 BVES-AS1Q5T3Y7 98 aa4.1□□□□□ -1.75
USP48-207ENST00000471752 C20orf166-AS1Q96NR2 134 aa4.1□□□□□ -1.75
USP48-207ENST00000471752 PAM16Q9Y3D7 125 aa4.1□□□□□ -1.75
USP48-207ENST00000471752 S100A6P06703 90 aa4.09□□□□□ -1.75
USP48-207ENST00000471752 FXYD2P54710 66 aa4.09□□□□□ -1.75
USP48-207ENST00000471752 DEFB116Q30KQ4 102 aa4.09□□□□□ -1.75
USP48-207ENST00000471752 SPATA45Q537H7 98 aa4.09□□□□□ -1.75
USP48-207ENST00000471752 H3BMG7 143 aa4.08□□□□□ -1.76
USP48-207ENST00000471752 RAB37Q96AX2 223 aa4.08□□□□□ -1.76
USP48-207ENST00000471752 KRTAP3-1Q9BYR8 98 aa4.08□□□□□ -1.76
USP48-207ENST00000471752 TRIAP1O43715 76 aa4.07□□□□□ -1.76
USP48-207ENST00000471752 MT2AP02795 61 aa4.07□□□□□ -1.76
USP48-207ENST00000471752 FABP2P12104 132 aa4.07□□□□□ -1.76
USP48-207ENST00000471752 TEN1Q86WV5 123 aa4.07□□□□□ -1.76
USP48-207ENST00000471752 PPDPFLQ8WWR9 84 aa4.07□□□□□ -1.76
USP48-207ENST00000471752 HIGD1BQ9P298 99 aa4.07□□□□□ -1.76
USP48-207ENST00000471752 A0A0B4J2C4 111 aa4.06□□□□□ -1.76
USP48-207ENST00000471752 H0YGX0 51 aa4.06□□□□□ -1.76
USP48-207ENST00000471752 K7ERJ3 54 aa4.06□□□□□ -1.76
USP48-207ENST00000471752 CEND1Q8N111 149 aa4.06□□□□□ -1.76
USP48-207ENST00000471752 C9orf118A6NHY6 69 aa4.05□□□□□ -1.76
USP48-207ENST00000471752 MT1FP04733 61 aa4.05□□□□□ -1.76
USP48-207ENST00000471752 S100A1P23297 94 aa4.05□□□□□ -1.76
USP48-207ENST00000471752 PRO1854Q9UHT4 67 aa4.05□□□□□ -1.76
USP48-207ENST00000471752 HRES1P13985 223 aa4.04□□□□□ -1.76
USP48-207ENST00000471752 MPLKIPQ8TAP9 179 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms