RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 A0A087X002 238 aa11.4□□□□□ -0.58
PSPC1-203ENST00000471658 BAALC-AS2P0C853 105 aa11.4□□□□□ -0.58
PSPC1-203ENST00000471658 OCIAD2Q56VL3 154 aa11.4□□□□□ -0.58
PSPC1-203ENST00000471658 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
PSPC1-203ENST00000471658 GTF2H5Q6ZYL4 71 aa11.37□□□□□ -0.59
PSPC1-203ENST00000471658 PRR26Q8N8Z3 221 aa11.37□□□□□ -0.59
PSPC1-203ENST00000471658 MYCBP2O75592 4640 aa11.36□□□□□ -0.59
PSPC1-203ENST00000471658 KRTAP13-2Q52LG2 175 aa11.36□□□□□ -0.59
PSPC1-203ENST00000471658 IGLV9-49A0A0B4J1Y8 123 aa11.35□□□□□ -0.59
PSPC1-203ENST00000471658 FAM229BQ4G0N7 80 aa11.35□□□□□ -0.59
PSPC1-203ENST00000471658 TMEM256-PLSCR3K7ERE1 68 aa11.35□□□□□ -0.59
PSPC1-203ENST00000471658 PPDPFLQ8WWR9 84 aa11.35□□□□□ -0.59
PSPC1-203ENST00000471658 LAMTOR3Q9UHA4 124 aa11.35□□□□□ -0.59
PSPC1-203ENST00000471658 CRYGAP11844 174 aa11.34□□□□□ -0.59
PSPC1-203ENST00000471658 SMCPP49901 116 aaPredicted RBP11.33□□□□□ -0.6
PSPC1-203ENST00000471658 PRO0461Q9UI25 63 aa11.33□□□□□ -0.6
PSPC1-203ENST00000471658 A0A1B0GV72 72 aa11.32□□□□□ -0.6
PSPC1-203ENST00000471658 GHRHP01286 108 aa11.32□□□□□ -0.6
PSPC1-203ENST00000471658 NDUFV3P56181 108 aaKnown RBP11.32□□□□□ -0.6
PSPC1-203ENST00000471658 LINC01600Q96MT4 127 aa11.32□□□□□ -0.6
PSPC1-203ENST00000471658 H3BQ85 93 aa11.31□□□□□ -0.6
PSPC1-203ENST00000471658 UBE2V1Q13404 147 aa11.3□□□□□ -0.6
PSPC1-203ENST00000471658 MOBPQ13875 183 aa11.3□□□□□ -0.6
PSPC1-203ENST00000471658 C9orf153Q5TBE3 101 aa11.29□□□□□ -0.6
PSPC1-203ENST00000471658 ANKRD29Q8N6D5 301 aa11.29□□□□□ -0.6
PSPC1-203ENST00000471658 H3BT86 120 aa11.28□□□□□ -0.6
PSPC1-203ENST00000471658 A0A0G2JQZ4 141 aa11.27□□□□□ -0.6
PSPC1-203ENST00000471658 F8WEM9 126 aa11.27□□□□□ -0.61
PSPC1-203ENST00000471658 TYMSOSQ8TAI1 123 aa11.27□□□□□ -0.61
PSPC1-203ENST00000471658 TNXBP22105 4242 aa11.26□□□□□ -0.61
PSPC1-203ENST00000471658 KRTAP10-8P60410 259 aa11.25□□□□□ -0.61
PSPC1-203ENST00000471658 PCLOQ9Y6V0 5065 aa11.24□□□□□ -0.61
PSPC1-203ENST00000471658 Q8NBF4 154 aa11.24□□□□□ -0.61
PSPC1-203ENST00000471658 MT1HL1P0DM35 61 aa11.23□□□□□ -0.61
PSPC1-203ENST00000471658 IGLV8-61A0A075B6I0 122 aa11.22□□□□□ -0.61
PSPC1-203ENST00000471658 F8W1H4 67 aa11.22□□□□□ -0.61
PSPC1-203ENST00000471658 OXTP01178 125 aa11.22□□□□□ -0.61
PSPC1-203ENST00000471658 SSBP3-AS1Q7Z2R9 100 aa11.21□□□□□ -0.61
PSPC1-203ENST00000471658 KRTAP29-1A8MX34 341 aaPredicted RBP11.2□□□□□ -0.62
PSPC1-203ENST00000471658 IGFL1Q6UW32 110 aa11.2□□□□□ -0.62
PSPC1-203ENST00000471658 RBM3P98179 157 aaKnown RBP11.18□□□□□ -0.62
PSPC1-203ENST00000471658 OBSCN-AS1Q96MR7 158 aa11.17□□□□□ -0.62
PSPC1-203ENST00000471658 JMJD7-PLA2G4BH0Y9G9 81 aa11.16□□□□□ -0.62
PSPC1-203ENST00000471658 HRCT1Q6UXD1 115 aa11.16□□□□□ -0.62
PSPC1-203ENST00000471658 Q6JHZ5 121 aa11.15□□□□□ -0.62
PSPC1-203ENST00000471658 C14orf132Q9NPU4 83 aa11.15□□□□□ -0.62
PSPC1-203ENST00000471658 ETDBQ3ZM63 59 aa11.14□□□□□ -0.63
PSPC1-203ENST00000471658 TRBV7-4A0A0J9YYF1 115 aa11.13□□□□□ -0.63
PSPC1-203ENST00000471658 LINC00304Q8N9R0 145 aa11.13□□□□□ -0.63
PSPC1-203ENST00000471658 DSCR8Q96T75 97 aa11.13□□□□□ -0.63
PSPC1-203ENST00000471658 A0A1W2PNM2 257 aa11.1□□□□□ -0.63
PSPC1-203ENST00000471658 TEN1Q86WV5 123 aa11.1□□□□□ -0.63
PSPC1-203ENST00000471658 J3QL48 77 aa11.09□□□□□ -0.63
PSPC1-203ENST00000471658 Q6ZQT0 140 aa11.08□□□□□ -0.64
PSPC1-203ENST00000471658 LOC110117498A0A087WWA1 95 aa11.07□□□□□ -0.64
PSPC1-203ENST00000471658 CCKP06307 115 aa11.07□□□□□ -0.64
PSPC1-203ENST00000471658 C4orf48Q5BLP8 95 aa11.07□□□□□ -0.64
PSPC1-203ENST00000471658 VPS25Q9BRG1 176 aa11.07□□□□□ -0.64
PSPC1-203ENST00000471658 CD164Q04900 197 aa11.04□□□□□ -0.64
PSPC1-203ENST00000471658 SPAG11AQ6PDA7 123 aa11.03□□□□□ -0.64
PSPC1-203ENST00000471658 DMBT1Q9UGM3 2413 aaPredicted RBP11.02□□□□□ -0.65
PSPC1-203ENST00000471658 TRBV7-7A0A0K0K1E9 115 aa11.02□□□□□ -0.65
PSPC1-203ENST00000471658 SPINK1P00995 79 aa11.02□□□□□ -0.65
PSPC1-203ENST00000471658 Q6Q795 121 aa11.02□□□□□ -0.65
PSPC1-203ENST00000471658 PDE6GP18545 87 aa11.01□□□□□ -0.65
PSPC1-203ENST00000471658 A0A087WSZ3 146 aa10.98□□□□□ -0.65
PSPC1-203ENST00000471658 RPS29P62273 56 aaKnown RBP10.93□□□□□ -0.66
PSPC1-203ENST00000471658 LIMD2Q9BT23 127 aa10.91□□□□□ -0.66
PSPC1-203ENST00000471658 RETNLBQ9BQ08 111 aa10.91□□□□□ -0.66
PSPC1-203ENST00000471658 Q5XG85 94 aa10.9□□□□□ -0.66
PSPC1-203ENST00000471658 HERC1Q15751 4861 aa10.89□□□□□ -0.67
PSPC1-203ENST00000471658 C21orf62-AS1Q17RA5 79 aa10.87□□□□□ -0.67
PSPC1-203ENST00000471658 C1orf195Q5TG92 126 aa10.86□□□□□ -0.67
PSPC1-203ENST00000471658 SS18L2Q9UHA2 77 aa10.86□□□□□ -0.67
PSPC1-203ENST00000471658 A0A1B0GW54 56 aa10.85□□□□□ -0.67
PSPC1-203ENST00000471658 LINC00846Q9NV44 126 aa10.84□□□□□ -0.67
PSPC1-203ENST00000471658 ASB16-AS1Q495Z4 193 aa10.84□□□□□ -0.67
PSPC1-203ENST00000471658 DEFB116Q30KQ4 102 aa10.83□□□□□ -0.68
PSPC1-203ENST00000471658 Q96NJ1 140 aa10.83□□□□□ -0.68
PSPC1-203ENST00000471658 LINC00472Q9H8W2 130 aa10.8□□□□□ -0.68
PSPC1-203ENST00000471658 NREPQ16612 68 aa10.8□□□□□ -0.68
PSPC1-203ENST00000471658 Q6ZVQ6 151 aa10.77□□□□□ -0.68
PSPC1-203ENST00000471658 PRR4Q16378 134 aa10.75□□□□□ -0.69
PSPC1-203ENST00000471658 FAM240AA0A1B0GVK7 77 aa10.74□□□□□ -0.69
PSPC1-203ENST00000471658 ACYP1P07311 99 aa10.74□□□□□ -0.69
PSPC1-203ENST00000471658 IGKV4-1P06312 121 aa10.73□□□□□ -0.69
PSPC1-203ENST00000471658 UBL5Q9BZL1 73 aa10.73□□□□□ -0.69
PSPC1-203ENST00000471658 J3QR89 54 aa10.73□□□□□ -0.69
PSPC1-203ENST00000471658 IGLV7-46A0A075B6I9 117 aa10.69□□□□□ -0.7
PSPC1-203ENST00000471658 FP248Q71RG6 208 aaPredicted RBP10.69□□□□□ -0.7
PSPC1-203ENST00000471658 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
PSPC1-203ENST00000471658 HMCN2Q8NDA2 5059 aa10.69□□□□□ -0.7
PSPC1-203ENST00000471658 K7ERU9 68 aa10.66□□□□□ -0.7
PSPC1-203ENST00000471658 BPY2O14599 106 aa10.66□□□□□ -0.7
PSPC1-203ENST00000471658 J3KT08 172 aa10.65□□□□□ -0.7
PSPC1-203ENST00000471658 DSCR10P59022 87 aa10.65□□□□□ -0.7
PSPC1-203ENST00000471658 LPAP08519 4548 aa10.63□□□□□ -0.71
PSPC1-203ENST00000471658 CDIP1Q9H305 208 aa10.62□□□□□ -0.71
PSPC1-203ENST00000471658 IGKV3D-7A0A0C4DH55 119 aa10.61□□□□□ -0.71
PSPC1-203ENST00000471658 C9orf92A6NGG3 77 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms