RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TRBV7-6A0A0J9YX20 115 aa4.84□□□□□ -1.63
CPSF4-211ENST00000471455 COPS9Q8WXC6 57 aa4.84□□□□□ -1.63
CPSF4-211ENST00000471455 A0A1B0GWB2 263 aa4.83□□□□□ -1.64
CPSF4-211ENST00000471455 SMIM29Q86T20 159 aa4.83□□□□□ -1.64
CPSF4-211ENST00000471455 NHP2Q9NX24 153 aaKnown RBP4.83□□□□□ -1.64
CPSF4-211ENST00000471455 TRGC2P03986 189 aa4.82□□□□□ -1.64
CPSF4-211ENST00000471455 IGLV5-48A0A075B6I7 105 aa4.81□□□□□ -1.64
CPSF4-211ENST00000471455 A4D1N5 150 aa4.81□□□□□ -1.64
CPSF4-211ENST00000471455 ZNF815PA8K554 130 aa4.81□□□□□ -1.64
CPSF4-211ENST00000471455 F8WEM9 126 aa4.81□□□□□ -1.64
CPSF4-211ENST00000471455 LITAFQ99732 161 aa4.81□□□□□ -1.64
CPSF4-211ENST00000471455 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
CPSF4-211ENST00000471455 CFC1P0CG37 223 aa4.8□□□□□ -1.64
CPSF4-211ENST00000471455 Q6Q795 121 aa4.8□□□□□ -1.64
CPSF4-211ENST00000471455 ATP11AUNQ6ZP68 121 aa4.8□□□□□ -1.64
CPSF4-211ENST00000471455 LOC105371267A0A1B0GV96 52 aa4.79□□□□□ -1.64
CPSF4-211ENST00000471455 SCGB1D4Q6XE38 83 aa4.78□□□□□ -1.64
CPSF4-211ENST00000471455 A6NDN8 102 aa4.77□□□□□ -1.65
CPSF4-211ENST00000471455 SYS1-DBNDD2H3BUS1 97 aa4.77□□□□□ -1.65
CPSF4-211ENST00000471455 IFITM1P13164 125 aa4.77□□□□□ -1.65
CPSF4-211ENST00000471455 PCP2Q8IVA1 136 aa4.77□□□□□ -1.65
CPSF4-211ENST00000471455 Q6JHZ5 121 aa4.76□□□□□ -1.65
CPSF4-211ENST00000471455 Q6ZVH6 145 aa4.76□□□□□ -1.65
CPSF4-211ENST00000471455 Q75L30 129 aa4.76□□□□□ -1.65
CPSF4-211ENST00000471455 A0A0G2JQZ4 141 aa4.75□□□□□ -1.65
CPSF4-211ENST00000471455 LINC01545Q5VT33 79 aa4.75□□□□□ -1.65
CPSF4-211ENST00000471455 PET117Q6UWS5 81 aa4.75□□□□□ -1.65
CPSF4-211ENST00000471455 TRAV13-2A0A0B4J235 113 aa4.74□□□□□ -1.65
CPSF4-211ENST00000471455 C20orf202A1L168 122 aa4.74□□□□□ -1.65
CPSF4-211ENST00000471455 VAMP3Q15836 100 aa4.74□□□□□ -1.65
CPSF4-211ENST00000471455 MPLKIPQ8TAP9 179 aa4.74□□□□□ -1.65
CPSF4-211ENST00000471455 CLEC2BQ92478 149 aa4.74□□□□□ -1.65
CPSF4-211ENST00000471455 OBSCN-AS1Q96MR7 158 aa4.74□□□□□ -1.65
CPSF4-211ENST00000471455 TRBV20-1A0A075B6N2 111 aa4.73□□□□□ -1.65
CPSF4-211ENST00000471455 TRBV7-7A0A0K0K1E9 115 aa4.73□□□□□ -1.65
CPSF4-211ENST00000471455 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
CPSF4-211ENST00000471455 TTTY13Q9BZ97 58 aa4.72□□□□□ -1.65
CPSF4-211ENST00000471455 LST1O00453 97 aa4.7□□□□□ -1.66
CPSF4-211ENST00000471455 SMIM11BQ8TCY0 68 aa4.7□□□□□ -1.66
CPSF4-211ENST00000471455 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
CPSF4-211ENST00000471455 SCGB1D1O95968 90 aa4.69□□□□□ -1.66
CPSF4-211ENST00000471455 MUSTN1Q8IVN3 82 aa4.69□□□□□ -1.66
CPSF4-211ENST00000471455 Q96NJ1 140 aa4.69□□□□□ -1.66
CPSF4-211ENST00000471455 SS18L2Q9UHA2 77 aa4.69□□□□□ -1.66
CPSF4-211ENST00000471455 USH2AO75445 5202 aa4.69□□□□□ -1.66
CPSF4-211ENST00000471455 hADV29S1A0JD25 119 aa4.68□□□□□ -1.66
CPSF4-211ENST00000471455 COLCA2A8K830 154 aa4.68□□□□□ -1.66
CPSF4-211ENST00000471455 OCIAD2Q56VL3 154 aa4.68□□□□□ -1.66
CPSF4-211ENST00000471455 IGFL1Q6UW32 110 aa4.68□□□□□ -1.66
CPSF4-211ENST00000471455 LINC00575Q6W349 94 aa4.68□□□□□ -1.66
CPSF4-211ENST00000471455 Q6ZQY7 126 aa4.68□□□□□ -1.66
CPSF4-211ENST00000471455 PPDPFLQ8WWR9 84 aa4.68□□□□□ -1.66
CPSF4-211ENST00000471455 HIST1H2BKO60814 126 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 HIST1H2BJP06899 126 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 C3orf79P0CE67 100 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 HIST1H2BOP23527 126 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 HIST1H2BBP33778 126 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 HIST1H2BDP58876 126 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 KRTDAPP60985 99 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 HIST1H2BCP62807 126 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 HIST2H2BEQ16778 126 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.67□□□□□ -1.66
CPSF4-211ENST00000471455 HIST1H2BHQ93079 126 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 HIST1H2BNQ99877 126 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 HIST1H2BMQ99879 126 aa4.67□□□□□ -1.66
CPSF4-211ENST00000471455 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.66□□□□□ -1.66
CPSF4-211ENST00000471455 C20orf166-AS1Q96NR2 134 aa4.66□□□□□ -1.66
CPSF4-211ENST00000471455 IGKV2D-30A0A075B6S6 120 aa4.65□□□□□ -1.67
CPSF4-211ENST00000471455 SNHG12Q9BXW3 62 aa4.65□□□□□ -1.67
CPSF4-211ENST00000471455 FAM236DA0A1B0GTK5 79 aa4.64□□□□□ -1.67
CPSF4-211ENST00000471455 FAM236CP0DP71 79 aa4.64□□□□□ -1.67
CPSF4-211ENST00000471455 SNRPEP62304 92 aaKnown RBP4.64□□□□□ -1.67
CPSF4-211ENST00000471455 A8MUU9 505 aa4.63□□□□□ -1.67
CPSF4-211ENST00000471455 BVES-AS1Q5T3Y7 98 aa4.63□□□□□ -1.67
CPSF4-211ENST00000471455 SNCGO76070 127 aa4.62□□□□□ -1.67
CPSF4-211ENST00000471455 LINC00846Q9NV44 126 aa4.62□□□□□ -1.67
CPSF4-211ENST00000471455 H3BUT2 72 aa4.61□□□□□ -1.67
CPSF4-211ENST00000471455 ATOH7Q8N100 152 aa4.61□□□□□ -1.67
CPSF4-211ENST00000471455 C12orf57Q99622 126 aa4.61□□□□□ -1.67
CPSF4-211ENST00000471455 RBM12B-AS1Q9P1G2 102 aa4.61□□□□□ -1.67
CPSF4-211ENST00000471455 FCGBPQ9Y6R7 5405 aaPredicted RBP4.61□□□□□ -1.67
CPSF4-211ENST00000471455 MT2AP02795 61 aa4.6□□□□□ -1.67
CPSF4-211ENST00000471455 COA6Q5JTJ3 125 aaKnown RBP4.6□□□□□ -1.67
CPSF4-211ENST00000471455 TEN1Q86WV5 123 aa4.6□□□□□ -1.67
CPSF4-211ENST00000471455 HSBP1L1C9JCN9 74 aa4.59□□□□□ -1.67
CPSF4-211ENST00000471455 PCP4L1A6NKN8 68 aa4.58□□□□□ -1.68
CPSF4-211ENST00000471455 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
CPSF4-211ENST00000471455 SIGMAR1Q99720 223 aa4.58□□□□□ -1.68
CPSF4-211ENST00000471455 SYNE2Q8WXH0 6885 aaKnown RBP4.58□□□□□ -1.68
CPSF4-211ENST00000471455 A0A087WSZ3 146 aa4.57□□□□□ -1.68
CPSF4-211ENST00000471455 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
CPSF4-211ENST00000471455 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
CPSF4-211ENST00000471455 DSCR10P59022 87 aa4.56□□□□□ -1.68
CPSF4-211ENST00000471455 MT1FP04733 61 aa4.55□□□□□ -1.68
CPSF4-211ENST00000471455 NDUFV3P56181 108 aaKnown RBP4.55□□□□□ -1.68
CPSF4-211ENST00000471455 LINC00313P59037 77 aa4.55□□□□□ -1.68
CPSF4-211ENST00000471455 MTURNQ8N3F0 131 aa4.55□□□□□ -1.68
CPSF4-211ENST00000471455 H0YGX0 51 aa4.53□□□□□ -1.68
CPSF4-211ENST00000471455 HIST1H4GQ99525 98 aa4.53□□□□□ -1.68
CPSF4-211ENST00000471455 H3BMG7 143 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms