RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 LOC110117498A0A087WWA1 95 aa7.26□□□□□ -1.25
LINC00880-201ENST00000471357 ZNF706Q9Y5V0 76 aaPredicted RBP7.26□□□□□ -1.25
LINC00880-201ENST00000471357 APOBP04114 4563 aaKnown RBP7.26□□□□□ -1.25
LINC00880-201ENST00000471357 CCKP06307 115 aa7.25□□□□□ -1.25
LINC00880-201ENST00000471357 PDE6GP18545 87 aa7.25□□□□□ -1.25
LINC00880-201ENST00000471357 SPRR4Q96PI1 79 aa7.25□□□□□ -1.25
LINC00880-201ENST00000471357 TRBV7-4A0A0J9YYF1 115 aa7.25□□□□□ -1.25
LINC00880-201ENST00000471357 J3QL48 77 aa7.25□□□□□ -1.25
LINC00880-201ENST00000471357 Q6ZQT0 140 aa7.25□□□□□ -1.25
LINC00880-201ENST00000471357 FAM240AA0A1B0GVK7 77 aa7.24□□□□□ -1.25
LINC00880-201ENST00000471357 F8WEM9 126 aa7.24□□□□□ -1.25
LINC00880-201ENST00000471357 VPS13BQ7Z7G8 4022 aa7.23□□□□□ -1.25
LINC00880-201ENST00000471357 ACYP1P07311 99 aa7.23□□□□□ -1.25
LINC00880-201ENST00000471357 SMR3BP02814 79 aaPredicted RBP7.22□□□□□ -1.25
LINC00880-201ENST00000471357 LINC00483Q53H64 154 aa7.22□□□□□ -1.25
LINC00880-201ENST00000471357 SRRM2Q9UQ35 2752 aaKnown RBP7.22□□□□□ -1.25
LINC00880-201ENST00000471357 RPL37AP61513 92 aaKnown RBP7.22□□□□□ -1.25
LINC00880-201ENST00000471357 IGLV8-61A0A075B6I0 122 aa7.2□□□□□ -1.26
LINC00880-201ENST00000471357 C21orf62-AS1Q17RA5 79 aa7.2□□□□□ -1.26
LINC00880-201ENST00000471357 VPS25Q9BRG1 176 aa7.2□□□□□ -1.26
LINC00880-201ENST00000471357 CDIP1Q9H305 208 aa7.19□□□□□ -1.26
LINC00880-201ENST00000471357 ANAPC11Q9NYG5 84 aa7.18□□□□□ -1.26
LINC00880-201ENST00000471357 IGFL1Q6UW32 110 aa7.17□□□□□ -1.26
LINC00880-201ENST00000471357 LINC00846Q9NV44 126 aa7.17□□□□□ -1.26
LINC00880-201ENST00000471357 IGLV9-49A0A0B4J1Y8 123 aa7.16□□□□□ -1.26
LINC00880-201ENST00000471357 Q6JHZ5 121 aa7.16□□□□□ -1.26
LINC00880-201ENST00000471357 A0A1W2PNM2 257 aa7.15□□□□□ -1.26
LINC00880-201ENST00000471357 FAT1Q14517 4588 aa7.15□□□□□ -1.26
LINC00880-201ENST00000471357 A0A0G2JQZ4 141 aa7.15□□□□□ -1.27
LINC00880-201ENST00000471357 CDK2AP2O75956 126 aa7.15□□□□□ -1.27
LINC00880-201ENST00000471357 C9orf153Q5TBE3 101 aa7.15□□□□□ -1.27
LINC00880-201ENST00000471357 SPINK6Q6UWN8 80 aa7.15□□□□□ -1.27
LINC00880-201ENST00000471357 Q8NBF4 154 aa7.15□□□□□ -1.27
LINC00880-201ENST00000471357 A0A1B0GW54 56 aa7.12□□□□□ -1.27
LINC00880-201ENST00000471357 KRTAP10-4P60372 401 aaPredicted RBP7.12□□□□□ -1.27
LINC00880-201ENST00000471357 EPPK1P58107 5090 aaKnown RBP7.12□□□□□ -1.27
LINC00880-201ENST00000471357 MOBPQ13875 183 aa7.11□□□□□ -1.27
LINC00880-201ENST00000471357 UBL5Q9BZL1 73 aa7.11□□□□□ -1.27
LINC00880-201ENST00000471357 RYR1P21817 5038 aa7.11□□□□□ -1.27
LINC00880-201ENST00000471357 CRYGAP11844 174 aa7.11□□□□□ -1.27
LINC00880-201ENST00000471357 FAM229BQ4G0N7 80 aa7.11□□□□□ -1.27
LINC00880-201ENST00000471357 FAM229AH3BQW9 127 aa7.1□□□□□ -1.27
LINC00880-201ENST00000471357 KRTAP1-4P0C5Y4 121 aa7.1□□□□□ -1.27
LINC00880-201ENST00000471357 LINC00643Q86TS7 51 aa7.1□□□□□ -1.27
LINC00880-201ENST00000471357 HSPG2P98160 4391 aa7.1□□□□□ -1.27
LINC00880-201ENST00000471357 PCP4P48539 62 aa7.1□□□□□ -1.27
LINC00880-201ENST00000471357 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
LINC00880-201ENST00000471357 Q6Q795 121 aa7.09□□□□□ -1.27
LINC00880-201ENST00000471357 SIGMAR1Q99720 223 aa7.09□□□□□ -1.27
LINC00880-201ENST00000471357 Q6ZVQ6 151 aa7.08□□□□□ -1.28
LINC00880-201ENST00000471357 A0A087X002 238 aa7.08□□□□□ -1.28
LINC00880-201ENST00000471357 MT-ATP8P03928 68 aa7.08□□□□□ -1.28
LINC00880-201ENST00000471357 SSBP3-AS1Q7Z2R9 100 aa7.08□□□□□ -1.28
LINC00880-201ENST00000471357 NREPQ16612 68 aa7.06□□□□□ -1.28
LINC00880-201ENST00000471357 A0A087WSZ3 146 aa7.06□□□□□ -1.28
LINC00880-201ENST00000471357 KRTAP13-2Q52LG2 175 aa7.06□□□□□ -1.28
LINC00880-201ENST00000471357 TRBV7-7A0A0K0K1E9 115 aa7.05□□□□□ -1.28
LINC00880-201ENST00000471357 Q5VSD8 79 aa7.05□□□□□ -1.28
LINC00880-201ENST00000471357 KIAA1109Q2LD37 5005 aa7.04□□□□□ -1.28
LINC00880-201ENST00000471357 HRCT1Q6UXD1 115 aa7.03□□□□□ -1.28
LINC00880-201ENST00000471357 IGKV3D-7A0A0C4DH55 119 aa7.03□□□□□ -1.28
LINC00880-201ENST00000471357 ATP5EP2Q5VTU8 51 aa7.02□□□□□ -1.29
LINC00880-201ENST00000471357 PKHD1L1Q86WI1 4243 aa7.01□□□□□ -1.29
LINC00880-201ENST00000471357 CD164Q04900 197 aa7□□□□□ -1.29
LINC00880-201ENST00000471357 TYMSOSQ8TAI1 123 aa7□□□□□ -1.29
LINC00880-201ENST00000471357 PRR26Q8N8Z3 221 aa7□□□□□ -1.29
LINC00880-201ENST00000471357 CXCL6P80162 114 aa6.99□□□□□ -1.29
LINC00880-201ENST00000471357 BPY2O14599 106 aa6.98□□□□□ -1.29
LINC00880-201ENST00000471357 Q8N1X5 172 aa6.98□□□□□ -1.29
LINC00880-201ENST00000471357 KRTAP17-1Q9BYP8 105 aa6.98□□□□□ -1.29
LINC00880-201ENST00000471357 IMUPQ9GZP8 106 aa6.98□□□□□ -1.29
LINC00880-201ENST00000471357 SS18L2Q9UHA2 77 aa6.98□□□□□ -1.29
LINC00880-201ENST00000471357 HIST1H4AP62805 103 aaKnown RBP6.94□□□□□ -1.3
LINC00880-201ENST00000471357 DEFB116Q30KQ4 102 aa6.94□□□□□ -1.3
LINC00880-201ENST00000471357 LINC00472Q9H8W2 130 aa6.94□□□□□ -1.3
LINC00880-201ENST00000471357 DSCR10P59022 87 aa6.92□□□□□ -1.3
LINC00880-201ENST00000471357 A0A087WVE0 104 aa6.91□□□□□ -1.3
LINC00880-201ENST00000471357 LINC00304Q8N9R0 145 aa6.91□□□□□ -1.3
LINC00880-201ENST00000471357 Q96NJ1 140 aa6.91□□□□□ -1.3
LINC00880-201ENST00000471357 SPINK1P00995 79 aa6.91□□□□□ -1.3
LINC00880-201ENST00000471357 SCGB1A1P11684 91 aa6.91□□□□□ -1.3
LINC00880-201ENST00000471357 Q8N9L7 120 aa6.91□□□□□ -1.3
LINC00880-201ENST00000471357 J3KT08 172 aa6.9□□□□□ -1.3
LINC00880-201ENST00000471357 Q5XG85 94 aa6.9□□□□□ -1.3
LINC00880-201ENST00000471357 SPAG11AQ6PDA7 123 aa6.9□□□□□ -1.3
LINC00880-201ENST00000471357 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
LINC00880-201ENST00000471357 LIMD2Q9BT23 127 aa6.89□□□□□ -1.31
LINC00880-201ENST00000471357 IGKV4-1P06312 121 aa6.89□□□□□ -1.31
LINC00880-201ENST00000471357 BIRC6Q9NR09 4857 aa6.88□□□□□ -1.31
LINC00880-201ENST00000471357 K7EQZ3 153 aa6.88□□□□□ -1.31
LINC00880-201ENST00000471357 FAM236AA0A1B0GUQ0 79 aa6.86□□□□□ -1.31
LINC00880-201ENST00000471357 FAM236BA0A1B0GV22 79 aa6.86□□□□□ -1.31
LINC00880-201ENST00000471357 A8MWP4 228 aa6.86□□□□□ -1.31
LINC00880-201ENST00000471357 RPS29P62273 56 aaKnown RBP6.86□□□□□ -1.31
LINC00880-201ENST00000471357 KRTAP10-8P60410 259 aa6.86□□□□□ -1.31
LINC00880-201ENST00000471357 LRP1Q07954 4544 aaKnown RBP6.85□□□□□ -1.31
LINC00880-201ENST00000471357 NDUFB1O75438 58 aa6.84□□□□□ -1.31
LINC00880-201ENST00000471357 PRR15Q8IV56 129 aa6.84□□□□□ -1.31
LINC00880-201ENST00000471357 TNXBP22105 4242 aa6.84□□□□□ -1.31
LINC00880-201ENST00000471357 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms