RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 C21orf62-AS1Q17RA5 79 aa5.76□□□□□ -1.49
VPS52-216ENST00000471309 C1orf137Q5JT78 98 aa5.76□□□□□ -1.49
VPS52-216ENST00000471309 HECTD4Q9Y4D8 3996 aa5.75□□□□□ -1.49
VPS52-216ENST00000471309 TRBV7-4A0A0J9YYF1 115 aa5.75□□□□□ -1.49
VPS52-216ENST00000471309 GAGE2AQ6NT46 116 aa5.75□□□□□ -1.49
VPS52-216ENST00000471309 DSCR8Q96T75 97 aa5.75□□□□□ -1.49
VPS52-216ENST00000471309 VPS25Q9BRG1 176 aa5.75□□□□□ -1.49
VPS52-216ENST00000471309 ZNF861PO60384 105 aa5.74□□□□□ -1.49
VPS52-216ENST00000471309 CCKP06307 115 aa5.74□□□□□ -1.49
VPS52-216ENST00000471309 Q6ZQT0 140 aa5.74□□□□□ -1.49
VPS52-216ENST00000471309 SMIM29Q86T20 159 aa5.74□□□□□ -1.49
VPS52-216ENST00000471309 IGLV7-43P04211 117 aa5.73□□□□□ -1.49
VPS52-216ENST00000471309 C3orf22Q8N5N4 141 aa5.73□□□□□ -1.49
VPS52-216ENST00000471309 CDIP1Q9H305 208 aa5.73□□□□□ -1.49
VPS52-216ENST00000471309 ZNF706Q9Y5V0 76 aaPredicted RBP5.73□□□□□ -1.49
VPS52-216ENST00000471309 F8WEM9 126 aa5.72□□□□□ -1.49
VPS52-216ENST00000471309 HAMPP81172 84 aa5.72□□□□□ -1.49
VPS52-216ENST00000471309 SPRR4Q96PI1 79 aa5.71□□□□□ -1.5
VPS52-216ENST00000471309 IGLV8-61A0A075B6I0 122 aa5.7□□□□□ -1.5
VPS52-216ENST00000471309 LINC00483Q53H64 154 aa5.7□□□□□ -1.5
VPS52-216ENST00000471309 LINC00846Q9NV44 126 aa5.68□□□□□ -1.5
VPS52-216ENST00000471309 A0A1B0GW54 56 aa5.67□□□□□ -1.5
VPS52-216ENST00000471309 XGP55808 180 aa5.67□□□□□ -1.5
VPS52-216ENST00000471309 Q6JHZ5 121 aa5.66□□□□□ -1.5
VPS52-216ENST00000471309 LINC00643Q86TS7 51 aa5.66□□□□□ -1.5
VPS52-216ENST00000471309 Q8NBF4 154 aa5.66□□□□□ -1.5
VPS52-216ENST00000471309 DYNC1H1Q14204 4646 aaKnown RBP5.65□□□□□ -1.5
VPS52-216ENST00000471309 A0A1W2PNM2 257 aa5.65□□□□□ -1.5
VPS52-216ENST00000471309 IGFL1Q6UW32 110 aa5.65□□□□□ -1.5
VPS52-216ENST00000471309 SIGMAR1Q99720 223 aa5.65□□□□□ -1.5
VPS52-216ENST00000471309 LRP1BQ9NZR2 4599 aa5.64□□□□□ -1.51
VPS52-216ENST00000471309 UBL5Q9BZL1 73 aa5.64□□□□□ -1.51
VPS52-216ENST00000471309 HERC2O95714 4834 aa5.63□□□□□ -1.51
VPS52-216ENST00000471309 MT-ATP8P03928 68 aa5.63□□□□□ -1.51
VPS52-216ENST00000471309 RPL37AP61513 92 aaKnown RBP5.63□□□□□ -1.51
VPS52-216ENST00000471309 ATP5EP2Q5VTU8 51 aa5.63□□□□□ -1.51
VPS52-216ENST00000471309 CRYGAP11844 174 aa5.62□□□□□ -1.51
VPS52-216ENST00000471309 Q6Q795 121 aa5.62□□□□□ -1.51
VPS52-216ENST00000471309 RYR1P21817 5038 aa5.62□□□□□ -1.51
VPS52-216ENST00000471309 PCLOQ9Y6V0 5065 aa5.61□□□□□ -1.51
VPS52-216ENST00000471309 IGLV9-49A0A0B4J1Y8 123 aa5.61□□□□□ -1.51
VPS52-216ENST00000471309 TRBV7-7A0A0K0K1E9 115 aa5.61□□□□□ -1.51
VPS52-216ENST00000471309 C9orf153Q5TBE3 101 aa5.61□□□□□ -1.51
VPS52-216ENST00000471309 Q6ZVQ6 151 aa5.61□□□□□ -1.51
VPS52-216ENST00000471309 FAM229BQ4G0N7 80 aa5.6□□□□□ -1.51
VPS52-216ENST00000471309 A0A0G2JQZ4 141 aa5.59□□□□□ -1.51
VPS52-216ENST00000471309 MOBPQ13875 183 aa5.59□□□□□ -1.51
VPS52-216ENST00000471309 SPINK6Q6UWN8 80 aa5.59□□□□□ -1.51
VPS52-216ENST00000471309 APOBP04114 4563 aaKnown RBP5.59□□□□□ -1.51
VPS52-216ENST00000471309 CDK2AP2O75956 126 aa5.58□□□□□ -1.52
VPS52-216ENST00000471309 SMR3BP02814 79 aaPredicted RBP5.58□□□□□ -1.52
VPS52-216ENST00000471309 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
VPS52-216ENST00000471309 IMUPQ9GZP8 106 aa5.58□□□□□ -1.52
VPS52-216ENST00000471309 ANAPC11Q9NYG5 84 aa5.58□□□□□ -1.52
VPS52-216ENST00000471309 PKHD1P08F94 4074 aa5.58□□□□□ -1.52
VPS52-216ENST00000471309 KRTAP1-4P0C5Y4 121 aa5.57□□□□□ -1.52
VPS52-216ENST00000471309 CXCL6P80162 114 aa5.57□□□□□ -1.52
VPS52-216ENST00000471309 NREPQ16612 68 aa5.57□□□□□ -1.52
VPS52-216ENST00000471309 A0A087WSZ3 146 aa5.56□□□□□ -1.52
VPS52-216ENST00000471309 SCGB1A1P11684 91 aa5.56□□□□□ -1.52
VPS52-216ENST00000471309 IGKV3D-7A0A0C4DH55 119 aa5.55□□□□□ -1.52
VPS52-216ENST00000471309 SSBP3-AS1Q7Z2R9 100 aa5.55□□□□□ -1.52
VPS52-216ENST00000471309 A0A087X002 238 aa5.54□□□□□ -1.52
VPS52-216ENST00000471309 PLA2G1BP04054 148 aaKnown RBP5.53□□□□□ -1.52
VPS52-216ENST00000471309 CD164Q04900 197 aa5.53□□□□□ -1.52
VPS52-216ENST00000471309 KRTAP13-2Q52LG2 175 aa5.53□□□□□ -1.52
VPS52-216ENST00000471309 BPY2O14599 106 aa5.52□□□□□ -1.53
VPS52-216ENST00000471309 SS18L2Q9UHA2 77 aa5.52□□□□□ -1.53
VPS52-216ENST00000471309 SRRM2Q9UQ35 2752 aaKnown RBP5.51□□□□□ -1.53
VPS52-216ENST00000471309 KIAA1109Q2LD37 5005 aa5.5□□□□□ -1.53
VPS52-216ENST00000471309 HIST1H4AP62805 103 aaKnown RBP5.5□□□□□ -1.53
VPS52-216ENST00000471309 Q5VSD8 79 aa5.49□□□□□ -1.53
VPS52-216ENST00000471309 HRCT1Q6UXD1 115 aa5.49□□□□□ -1.53
VPS52-216ENST00000471309 A0A087WVE0 104 aa5.48□□□□□ -1.53
VPS52-216ENST00000471309 FAM236AA0A1B0GUQ0 79 aa5.48□□□□□ -1.53
VPS52-216ENST00000471309 FAM236BA0A1B0GV22 79 aa5.48□□□□□ -1.53
VPS52-216ENST00000471309 LINC00472Q9H8W2 130 aa5.48□□□□□ -1.53
VPS52-216ENST00000471309 H3BS24 57 aa5.47□□□□□ -1.53
VPS52-216ENST00000471309 J3KT08 172 aa5.47□□□□□ -1.53
VPS52-216ENST00000471309 IGKV4-1P06312 121 aa5.47□□□□□ -1.53
VPS52-216ENST00000471309 DSCR10P59022 87 aa5.47□□□□□ -1.53
VPS52-216ENST00000471309 TYMSOSQ8TAI1 123 aa5.47□□□□□ -1.53
VPS52-216ENST00000471309 FAT1Q14517 4588 aa5.46□□□□□ -1.54
VPS52-216ENST00000471309 Q5XG85 94 aa5.46□□□□□ -1.54
VPS52-216ENST00000471309 PRR26Q8N8Z3 221 aa5.46□□□□□ -1.54
VPS52-216ENST00000471309 Q96NJ1 140 aa5.46□□□□□ -1.54
VPS52-216ENST00000471309 VPS13BQ7Z7G8 4022 aa5.45□□□□□ -1.54
VPS52-216ENST00000471309 ASB16-AS1Q495Z4 193 aa5.45□□□□□ -1.54
VPS52-216ENST00000471309 Q8N9L7 120 aa5.45□□□□□ -1.54
VPS52-216ENST00000471309 K7EQZ3 153 aa5.44□□□□□ -1.54
VPS52-216ENST00000471309 DEFB116Q30KQ4 102 aa5.44□□□□□ -1.54
VPS52-216ENST00000471309 Q8N1X5 172 aa5.44□□□□□ -1.54
VPS52-216ENST00000471309 A8MWP4 228 aa5.43□□□□□ -1.54
VPS52-216ENST00000471309 ATOX1O00244 68 aa5.43□□□□□ -1.54
VPS52-216ENST00000471309 LIMD2Q9BT23 127 aa5.43□□□□□ -1.54
VPS52-216ENST00000471309 SPINK1P00995 79 aa5.42□□□□□ -1.54
VPS52-216ENST00000471309 PCP4P48539 62 aa5.42□□□□□ -1.54
VPS52-216ENST00000471309 RPS29P62273 56 aaKnown RBP5.42□□□□□ -1.54
VPS52-216ENST00000471309 SPAG11AQ6PDA7 123 aa5.42□□□□□ -1.54
VPS52-216ENST00000471309 LINC00304Q8N9R0 145 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms