RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-208ENST00000471250 C21orf62-AS1Q17RA5 79 aa15.81■□□□□ 0.12
U2AF1-208ENST00000471250 F8WEM9 126 aa15.77■□□□□ 0.12
U2AF1-208ENST00000471250 XGP55808 180 aa15.77■□□□□ 0.12
U2AF1-208ENST00000471250 LINC00846Q9NV44 126 aa15.77■□□□□ 0.12
U2AF1-208ENST00000471250 SPRR4Q96PI1 79 aa15.76■□□□□ 0.11
U2AF1-208ENST00000471250 SIGMAR1Q99720 223 aa15.76■□□□□ 0.11
U2AF1-208ENST00000471250 ZNF706Q9Y5V0 76 aaPredicted RBP15.75■□□□□ 0.11
U2AF1-208ENST00000471250 IGLV8-61A0A075B6I0 122 aa15.73■□□□□ 0.11
U2AF1-208ENST00000471250 LINC00483Q53H64 154 aa15.71■□□□□ 0.11
U2AF1-208ENST00000471250 MT-ATP8P03928 68 aa15.7■□□□□ 0.1
U2AF1-208ENST00000471250 LRP1BQ9NZR2 4599 aa15.69■□□□□ 0.1
U2AF1-208ENST00000471250 LINC00643Q86TS7 51 aa15.68■□□□□ 0.1
U2AF1-208ENST00000471250 DYNC1H1Q14204 4646 aaKnown RBP15.68■□□□□ 0.1
U2AF1-208ENST00000471250 PKHD1P08F94 4074 aa15.66■□□□□ 0.1
U2AF1-208ENST00000471250 A0A1W2PNM2 257 aa15.66■□□□□ 0.1
U2AF1-208ENST00000471250 IGFL1Q6UW32 110 aa15.64■□□□□ 0.09
U2AF1-208ENST00000471250 Q8NBF4 154 aa15.63■□□□□ 0.09
U2AF1-208ENST00000471250 UBL5Q9BZL1 73 aa15.62■□□□□ 0.09
U2AF1-208ENST00000471250 Q6JHZ5 121 aa15.61■□□□□ 0.09
U2AF1-208ENST00000471250 SRRM2Q9UQ35 2752 aaKnown RBP15.61■□□□□ 0.09
U2AF1-208ENST00000471250 A0A1B0GW54 56 aa15.6■□□□□ 0.09
U2AF1-208ENST00000471250 A0A0G2JQZ4 141 aa15.57■□□□□ 0.08
U2AF1-208ENST00000471250 Q6ZVQ6 151 aa15.56■□□□□ 0.08
U2AF1-208ENST00000471250 ANAPC11Q9NYG5 84 aa15.55■□□□□ 0.08
U2AF1-208ENST00000471250 IGLV9-49A0A0B4J1Y8 123 aa15.54■□□□□ 0.08
U2AF1-208ENST00000471250 CRYGAP11844 174 aa15.54■□□□□ 0.08
U2AF1-208ENST00000471250 RPL37AP61513 92 aaKnown RBP15.53■□□□□ 0.08
U2AF1-208ENST00000471250 RYR3Q15413 4870 aa15.53■□□□□ 0.08
U2AF1-208ENST00000471250 C9orf153Q5TBE3 101 aa15.52■□□□□ 0.08
U2AF1-208ENST00000471250 TRBV7-7A0A0K0K1E9 115 aa15.51■□□□□ 0.07
U2AF1-208ENST00000471250 IGKV3D-7A0A0C4DH55 119 aa15.48■□□□□ 0.07
U2AF1-208ENST00000471250 SMR3BP02814 79 aaPredicted RBP15.48■□□□□ 0.07
U2AF1-208ENST00000471250 ATP5EP2Q5VTU8 51 aa15.48■□□□□ 0.07
U2AF1-208ENST00000471250 Q6Q795 121 aa15.48■□□□□ 0.07
U2AF1-208ENST00000471250 APOBP04114 4563 aaKnown RBP15.48■□□□□ 0.07
U2AF1-208ENST00000471250 NREPQ16612 68 aa15.46■□□□□ 0.07
U2AF1-208ENST00000471250 IMUPQ9GZP8 106 aa15.46■□□□□ 0.07
U2AF1-208ENST00000471250 MOBPQ13875 183 aa15.45■□□□□ 0.06
U2AF1-208ENST00000471250 VPS13BQ7Z7G8 4022 aa15.43■□□□□ 0.06
U2AF1-208ENST00000471250 SCGB1A1P11684 91 aa15.43■□□□□ 0.06
U2AF1-208ENST00000471250 SPINK6Q6UWN8 80 aa15.41■□□□□ 0.06
U2AF1-208ENST00000471250 FAM229BQ4G0N7 80 aa15.39■□□□□ 0.05
U2AF1-208ENST00000471250 A0A087WSZ3 146 aa15.38■□□□□ 0.05
U2AF1-208ENST00000471250 CXCL6P80162 114 aa15.38■□□□□ 0.05
U2AF1-208ENST00000471250 KRTAP1-4P0C5Y4 121 aa15.37■□□□□ 0.05
U2AF1-208ENST00000471250 KRTAP10-4P60372 401 aaPredicted RBP15.36■□□□□ 0.05
U2AF1-208ENST00000471250 SSBP3-AS1Q7Z2R9 100 aa15.35■□□□□ 0.05
U2AF1-208ENST00000471250 A0A087X002 238 aa15.32■□□□□ 0.04
U2AF1-208ENST00000471250 BPY2O14599 106 aa15.31■□□□□ 0.04
U2AF1-208ENST00000471250 KRTAP13-2Q52LG2 175 aa15.31■□□□□ 0.04
U2AF1-208ENST00000471250 CDK2AP2O75956 126 aa15.3■□□□□ 0.04
U2AF1-208ENST00000471250 HIST1H4AP62805 103 aaKnown RBP15.28■□□□□ 0.04
U2AF1-208ENST00000471250 HRCT1Q6UXD1 115 aa15.28■□□□□ 0.04
U2AF1-208ENST00000471250 PLA2G1BP04054 148 aaKnown RBP15.25■□□□□ 0.03
U2AF1-208ENST00000471250 A0A087WVE0 104 aa15.24■□□□□ 0.03
U2AF1-208ENST00000471250 CD164Q04900 197 aa15.23■□□□□ 0.03
U2AF1-208ENST00000471250 FAM229AH3BQW9 127 aa15.2■□□□□ 0.02
U2AF1-208ENST00000471250 FAT1Q14517 4588 aa15.2■□□□□ 0.02
U2AF1-208ENST00000471250 FAM236AA0A1B0GUQ0 79 aa15.19■□□□□ 0.02
U2AF1-208ENST00000471250 FAM236BA0A1B0GV22 79 aa15.19■□□□□ 0.02
U2AF1-208ENST00000471250 LINC00472Q9H8W2 130 aa15.19■□□□□ 0.02
U2AF1-208ENST00000471250 SS18L2Q9UHA2 77 aa15.19■□□□□ 0.02
U2AF1-208ENST00000471250 DSCR10P59022 87 aa15.17■□□□□ 0.02
U2AF1-208ENST00000471250 IGKV4-1P06312 121 aa15.16■□□□□ 0.02
U2AF1-208ENST00000471250 PCP4P48539 62 aa15.16■□□□□ 0.02
U2AF1-208ENST00000471250 DEFB116Q30KQ4 102 aa15.15■□□□□ 0.02
U2AF1-208ENST00000471250 Q8N9L7 120 aa15.15■□□□□ 0.02
U2AF1-208ENST00000471250 TYMSOSQ8TAI1 123 aa15.12■□□□□ 0.01
U2AF1-208ENST00000471250 Q96NJ1 140 aa15.1■□□□□ 0.01
U2AF1-208ENST00000471250 Q5VSD8 79 aa15.09■□□□□ 0.01
U2AF1-208ENST00000471250 RYR1P21817 5038 aa15.09■□□□□ 0.01
U2AF1-208ENST00000471250 PRR26Q8N8Z3 221 aa15.09■□□□□ 0.01
U2AF1-208ENST00000471250 HSPG2P98160 4391 aa15.08■□□□□ 0.01
U2AF1-208ENST00000471250 J3KT08 172 aa15.08■□□□□ 0
U2AF1-208ENST00000471250 PKHD1L1Q86WI1 4243 aa15.07■□□□□ 0
U2AF1-208ENST00000471250 K7EQZ3 153 aa15.06■□□□□ 0
U2AF1-208ENST00000471250 ASB16-AS1Q495Z4 193 aa15.03■□□□□ -0
U2AF1-208ENST00000471250 ANAPC13Q9BS18 74 aa15.03■□□□□ -0
U2AF1-208ENST00000471250 Q5XG85 94 aa15.02□□□□□ -0.01
U2AF1-208ENST00000471250 A8MWP4 228 aa15.01□□□□□ -0.01
U2AF1-208ENST00000471250 ATOX1O00244 68 aa15□□□□□ -0.01
U2AF1-208ENST00000471250 C4orf48Q5BLP8 95 aa14.99□□□□□ -0.01
U2AF1-208ENST00000471250 KRTAP17-1Q9BYP8 105 aa14.98□□□□□ -0.01
U2AF1-208ENST00000471250 EPPK1P58107 5090 aaKnown RBP14.97□□□□□ -0.01
U2AF1-208ENST00000471250 PRR15Q8IV56 129 aa14.97□□□□□ -0.01
U2AF1-208ENST00000471250 SPINK1P00995 79 aa14.94□□□□□ -0.02
U2AF1-208ENST00000471250 LINC00304Q8N9R0 145 aa14.94□□□□□ -0.02
U2AF1-208ENST00000471250 LIMD2Q9BT23 127 aa14.94□□□□□ -0.02
U2AF1-208ENST00000471250 Q8N1X5 172 aa14.93□□□□□ -0.02
U2AF1-208ENST00000471250 NDUFB1O75438 58 aa14.92□□□□□ -0.02
U2AF1-208ENST00000471250 SPAG11AQ6PDA7 123 aa14.92□□□□□ -0.02
U2AF1-208ENST00000471250 KIAA1109Q2LD37 5005 aa14.89□□□□□ -0.03
U2AF1-208ENST00000471250 HCG22E2RYF7 251 aa14.89□□□□□ -0.03
U2AF1-208ENST00000471250 RPS29P62273 56 aaKnown RBP14.88□□□□□ -0.03
U2AF1-208ENST00000471250 C1orf195Q5TG92 126 aa14.86□□□□□ -0.03
U2AF1-208ENST00000471250 A0A1B0GVX0 72 aa14.84□□□□□ -0.03
U2AF1-208ENST00000471250 SMIM20Q8N5G0 67 aa14.82□□□□□ -0.04
U2AF1-208ENST00000471250 SERP2Q8N6R1 65 aa14.81□□□□□ -0.04
U2AF1-208ENST00000471250 KRTAP29-1A8MX34 341 aaPredicted RBP14.8□□□□□ -0.04
U2AF1-208ENST00000471250 WFDC13Q8IUB5 93 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms