RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PTRHD1Q6GMV3 140 aaKnown RBP-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 IDO2Q6ZQW0 420 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 STX19Q8N4C7 294 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 DEFB105AQ8NG35 78 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 CDC26Q8NHZ8 85 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 PYDC1Q8WXC3 89 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 LSM10Q969L4 123 aaKnown RBP-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 CFAP53Q96M91 514 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 EFCAB11Q9BUY7 163 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 CYP4F30PQ9H0H9 118 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 PARVGQ9HBI0 331 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 CDC42SE2Q9NRR3 84 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 LENEPQ9Y5L5 61 aa-0.48□□□□□ -2.49
UBXN4-207ENST00000471246 TRAV13-1A0A0B4J241 112 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 TRAV21A0A0B4J279 112 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 TRBV7-6A0A0J9YX20 115 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 J3KT08 172 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 RPP14O95059 124 aaKnown RBP-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 IFNGP01579 166 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 SLC25A4P12235 298 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 MRPS36P82909 103 aaKnown RBP-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 COX17Q14061 63 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 WHAMMP3Q1A5X7 153 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 BVES-AS1Q5T3Y7 98 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 TMEM78Q5T7P6 136 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 CYP2G1PQ6ZSU1 146 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 GOLT1AQ6ZVE7 132 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 ZNF720Q7Z2F6 126 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 TCTE3Q8IZS6 198 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 OTOSQ8NHW6 89 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 MRPL34Q9BQ48 92 aaKnown RBP-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 DPY30Q9C005 99 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 ENY2Q9NPA8 101 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 NXT2Q9NPJ8 142 aaKnown RBP-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 BET1LQ9NYM9 111 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 TOMM7Q9P0U1 55 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 ABRACLQ9P1F3 81 aa-0.49□□□□□ -2.49
UBXN4-207ENST00000471246 LOC101927531A0A1B0GV80 90 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 C7orf77A4D0Y5 90 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 H0YJX3 145 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 K7ERJ3 54 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 IGLC1P0CG04 106 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 SNCAP37840 140 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 RBP2P50120 134 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 NEDD8Q15843 81 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 FAM74A4Q5TZK3 123 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 AP3S1Q92572 193 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 CHMP6Q96FZ7 201 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 PBDC1Q9BVG4 233 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 HIGD1BQ9P298 99 aa-0.5□□□□□ -2.49
UBXN4-207ENST00000471246 hADV29S1A0JD25 119 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 MCRIP1C9JLW8 97 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 E5RI56 91 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 TSTD3H0UI37 97 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 S100A8P05109 93 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 DBIP07108 87 aaKnown RBP-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 TSPAN19P0C672 248 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 ADCYAP1P18509 176 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 POLR2JP52435 117 aaKnown RBP-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 HACD4Q5VWC8 232 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 IFT20Q8IY31 132 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 KCNRGQ8N5I3 272 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 SPTSSBQ8NFR3 76 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 TSC22D3Q99576 134 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 MAP1LC3BQ9GZQ8 125 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 SCP2D1Q9UJQ7 156 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 PRNDQ9UKY0 176 aa-0.51□□□□□ -2.49
UBXN4-207ENST00000471246 TRAV22A0A0B4J277 110 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 A0A1B0GWA3 101 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 GABARAPH6UMI1 98 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 HIST1H2BKO60814 126 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 BANF1O75531 89 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 IL5P05113 134 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 HIST1H2BJP06899 126 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 MGPP08493 103 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 LINC00158P58513 81 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 HSPE1P61604 102 aaKnown RBP-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 SEC11AP67812 179 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 FADDQ13158 208 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 HMGN3Q15651 99 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 CCDC58Q4VC31 144 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 S100A7L2Q5SY68 101 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 SFTA2Q6UW10 78 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 COMMD6Q7Z4G1 85 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 TMEM35BQ8NCS4 154 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 OR5H6Q8NGV6 325 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 PPDPFLQ8WWR9 84 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 DMAC1Q96GE9 116 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 SNHG12Q9BXW3 62 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 LYRM2Q9NU23 88 aaPredicted RBP-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 CALML5Q9NZT1 146 aa-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 FAM32AQ9Y421 112 aaKnown RBP-0.52□□□□□ -2.49
UBXN4-207ENST00000471246 A0A0G2JND7 137 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 TRBV27A0A0K0K1C4 114 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 GNG14A0A1W2PPG7 69 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 HIGD1CA8MV81 97 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 LINC00587B1AMM8 73 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 I3L3M4 83 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 TRGC2P03986 189 aa-0.53□□□□□ -2.49
UBXN4-207ENST00000471246 ARMS2P0C7Q2 107 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms