RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 MPLKIPQ8TAP9 179 aa6.19□□□□□ -1.42
HDAC3-205ENST00000469550 ZCCHC13Q8WW36 166 aaKnown RBP6.19□□□□□ -1.42
HDAC3-205ENST00000469550 PKIGQ9Y2B9 76 aa6.19□□□□□ -1.42
HDAC3-205ENST00000469550 SMIM29Q86T20 159 aa6.18□□□□□ -1.42
HDAC3-205ENST00000469550 PLA2G2DQ9UNK4 145 aa6.18□□□□□ -1.42
HDAC3-205ENST00000469550 DNAH11Q96DT5 4516 aa6.18□□□□□ -1.42
HDAC3-205ENST00000469550 A0A1W2PNM2 257 aa6.18□□□□□ -1.42
HDAC3-205ENST00000469550 SPRR4Q96PI1 79 aa6.18□□□□□ -1.42
HDAC3-205ENST00000469550 DNAH2Q9P225 4427 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 Q1T7F1 81 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 WFDC10BQ8IUB3 73 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 NKAPP1Q8N9T2 125 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 Q8NBF4 154 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 C7orf33Q8WU49 177 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 DEFB131BA0A096LNP1 70 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 SYCNQ0VAF6 134 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 C1orf195Q5TG92 126 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 DEFB105AQ8NG35 78 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 FAM30AQ9NZY2 134 aa6.17□□□□□ -1.42
HDAC3-205ENST00000469550 ETDCA0A1B0GVM5 59 aa6.16□□□□□ -1.42
HDAC3-205ENST00000469550 KRTAP4-16G5E9R7 235 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-205ENST00000469550 TLX1NBP0CAT3 122 aa6.16□□□□□ -1.42
HDAC3-205ENST00000469550 Q6ZRX8 168 aa6.16□□□□□ -1.42
HDAC3-205ENST00000469550 IGLV5-37A0A075B6J1 123 aa6.15□□□□□ -1.42
HDAC3-205ENST00000469550 SPRR1AP35321 89 aa6.15□□□□□ -1.42
HDAC3-205ENST00000469550 C1orf137Q5JT78 98 aa6.15□□□□□ -1.42
HDAC3-205ENST00000469550 CYP4F30PQ9H0H9 118 aa6.15□□□□□ -1.42
HDAC3-205ENST00000469550 RTL8CO15255 209 aa6.15□□□□□ -1.43
HDAC3-205ENST00000469550 DSCR10P59022 87 aa6.15□□□□□ -1.43
HDAC3-205ENST00000469550 SERTAD4-AS1Q5TG53 156 aa6.14□□□□□ -1.43
HDAC3-205ENST00000469550 PKD1P98161 4303 aa6.14□□□□□ -1.43
HDAC3-205ENST00000469550 Q6ZR54 194 aa6.13□□□□□ -1.43
HDAC3-205ENST00000469550 C1orf64Q8NEQ6 169 aa6.13□□□□□ -1.43
HDAC3-205ENST00000469550 PKHD1P08F94 4074 aa6.13□□□□□ -1.43
HDAC3-205ENST00000469550 LINC01556Q5JQF7 62 aa6.13□□□□□ -1.43
HDAC3-205ENST00000469550 PRR15Q8IV56 129 aa6.13□□□□□ -1.43
HDAC3-205ENST00000469550 Q9BRP9 147 aa6.13□□□□□ -1.43
HDAC3-205ENST00000469550 IGLV1-50A0A075B6I6 118 aa6.12□□□□□ -1.43
HDAC3-205ENST00000469550 V9GYY9 64 aa6.12□□□□□ -1.43
HDAC3-205ENST00000469550 NDUFB1O75438 58 aa6.11□□□□□ -1.43
HDAC3-205ENST00000469550 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.11□□□□□ -1.43
HDAC3-205ENST00000469550 HCG22E2RYF7 251 aa6.1□□□□□ -1.43
HDAC3-205ENST00000469550 K7EQZ3 153 aa6.1□□□□□ -1.43
HDAC3-205ENST00000469550 RYR1P21817 5038 aa6.1□□□□□ -1.43
HDAC3-205ENST00000469550 IGKV2D-24A0A075B6R9 120 aa6.09□□□□□ -1.43
HDAC3-205ENST00000469550 UBE2DNLQ8IWF7 75 aa6.09□□□□□ -1.43
HDAC3-205ENST00000469550 ST20-AS1Q8NBB2 130 aa6.08□□□□□ -1.44
HDAC3-205ENST00000469550 C1orf134Q5TEV5 83 aa6.07□□□□□ -1.44
HDAC3-205ENST00000469550 RPL37AP8A6NKH3 93 aa6.06□□□□□ -1.44
HDAC3-205ENST00000469550 DNAH10OSP0CZ25 163 aa6.06□□□□□ -1.44
HDAC3-205ENST00000469550 ABCA13Q86UQ4 5058 aa6.06□□□□□ -1.44
HDAC3-205ENST00000469550 HSPG2P98160 4391 aa6.06□□□□□ -1.44
HDAC3-205ENST00000469550 TRAV22A0A0B4J277 110 aa6.06□□□□□ -1.44
HDAC3-205ENST00000469550 PSCAO43653 123 aa6.05□□□□□ -1.44
HDAC3-205ENST00000469550 MP68P56378 58 aa6.05□□□□□ -1.44
HDAC3-205ENST00000469550 IGLV8-61A0A075B6I0 122 aa6.04□□□□□ -1.44
HDAC3-205ENST00000469550 LRCOL1A6NCL2 159 aa6.04□□□□□ -1.44
HDAC3-205ENST00000469550 H3BPC8 53 aa6.04□□□□□ -1.44
HDAC3-205ENST00000469550 MRPL55Q7Z7F7 128 aaKnown RBP6.04□□□□□ -1.44
HDAC3-205ENST00000469550 KRTAP7-1Q8IUC3 87 aa6.04□□□□□ -1.44
HDAC3-205ENST00000469550 SPANXA2-OT1Q8N9U9 137 aa6.04□□□□□ -1.44
HDAC3-205ENST00000469550 FAM168BA1KXE4 195 aa6.04□□□□□ -1.44
HDAC3-205ENST00000469550 CDK2AP2O75956 126 aa6.04□□□□□ -1.44
HDAC3-205ENST00000469550 SEC61GP60059 68 aa6.04□□□□□ -1.44
HDAC3-205ENST00000469550 NBDYA0A0U1RRE5 68 aa6.03□□□□□ -1.44
HDAC3-205ENST00000469550 UBE2BP63146 152 aa6.03□□□□□ -1.44
HDAC3-205ENST00000469550 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
HDAC3-205ENST00000469550 PMAIP1Q13794 54 aa6.02□□□□□ -1.45
HDAC3-205ENST00000469550 KRTAP29-1A8MX34 341 aaPredicted RBP6.02□□□□□ -1.45
HDAC3-205ENST00000469550 REG3GQ6UW15 175 aa6.02□□□□□ -1.45
HDAC3-205ENST00000469550 IGFL1Q6UW32 110 aa6.02□□□□□ -1.45
HDAC3-205ENST00000469550 LRP1BQ9NZR2 4599 aa6.01□□□□□ -1.45
HDAC3-205ENST00000469550 LINC00588Q9Y4M8 146 aa6.01□□□□□ -1.45
HDAC3-205ENST00000469550 C16orf90A8MZG2 172 aa6□□□□□ -1.45
HDAC3-205ENST00000469550 PSPHP1O15172 72 aa6□□□□□ -1.45
HDAC3-205ENST00000469550 APOBP04114 4563 aaKnown RBP5.99□□□□□ -1.45
HDAC3-205ENST00000469550 PRR4Q16378 134 aa5.98□□□□□ -1.45
HDAC3-205ENST00000469550 WFDC13Q8IUB5 93 aa5.98□□□□□ -1.45
HDAC3-205ENST00000469550 LINC00208Q96KT6 92 aa5.98□□□□□ -1.45
HDAC3-205ENST00000469550 LIMD2Q9BT23 127 aa5.98□□□□□ -1.45
HDAC3-205ENST00000469550 A0A087WSZ3 146 aa5.97□□□□□ -1.45
HDAC3-205ENST00000469550 A8MUN3 132 aa5.97□□□□□ -1.45
HDAC3-205ENST00000469550 Q5VV11 94 aa5.97□□□□□ -1.45
HDAC3-205ENST00000469550 Q8N1X5 172 aa5.97□□□□□ -1.45
HDAC3-205ENST00000469550 H0Y9P7 68 aa5.96□□□□□ -1.46
HDAC3-205ENST00000469550 Q8N9P0 234 aaPredicted RBP5.96□□□□□ -1.46
HDAC3-205ENST00000469550 KRTAP1-5Q9BYS1 174 aa5.96□□□□□ -1.46
HDAC3-205ENST00000469550 CASC2Q6XLA1 102 aa5.95□□□□□ -1.46
HDAC3-205ENST00000469550 C9orf163Q8N9P6 203 aa5.95□□□□□ -1.46
HDAC3-205ENST00000469550 SPRR1BP22528 89 aa5.95□□□□□ -1.46
HDAC3-205ENST00000469550 DEFB116Q30KQ4 102 aa5.95□□□□□ -1.46
HDAC3-205ENST00000469550 A0A0G2JQZ4 141 aa5.94□□□□□ -1.46
HDAC3-205ENST00000469550 A0A1W2PNN7 141 aa5.94□□□□□ -1.46
HDAC3-205ENST00000469550 A8MWP4 228 aa5.94□□□□□ -1.46
HDAC3-205ENST00000469550 UBE2AP49459 152 aa5.94□□□□□ -1.46
HDAC3-205ENST00000469550 CNBPP62633 177 aaKnown RBP5.93□□□□□ -1.46
HDAC3-205ENST00000469550 DNAH5Q8TE73 4624 aa5.93□□□□□ -1.46
HDAC3-205ENST00000469550 LINC00472Q9H8W2 130 aa5.93□□□□□ -1.46
HDAC3-205ENST00000469550 H0Y9J4 135 aa5.92□□□□□ -1.46
HDAC3-205ENST00000469550 KRTAP10-2P60368 255 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms