RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 C10orf91Q5T1B1 145 aa2.52□□□□□ -2.01
PTPN4-209ENST00000469511 SLC25A34Q6PIV7 304 aa2.52□□□□□ -2.01
PTPN4-209ENST00000469511 SMCO4Q9NRQ5 59 aa2.52□□□□□ -2.01
PTPN4-209ENST00000469511 TEX49A0A1B0GTD5 131 aa2.51□□□□□ -2.01
PTPN4-209ENST00000469511 A8MUU9 505 aa2.51□□□□□ -2.01
PTPN4-209ENST00000469511 MT-ND4LP03901 98 aa2.51□□□□□ -2.01
PTPN4-209ENST00000469511 MAP1LC3CQ9BXW4 147 aa2.51□□□□□ -2.01
PTPN4-209ENST00000469511 MYMXA0A1B0GTQ4 84 aa2.5□□□□□ -2.01
PTPN4-209ENST00000469511 NDUFC2O95298 119 aa2.5□□□□□ -2.01
PTPN4-209ENST00000469511 TCL1BO95988 128 aa2.5□□□□□ -2.01
PTPN4-209ENST00000469511 LINC00614P0C842 121 aa2.5□□□□□ -2.01
PTPN4-209ENST00000469511 CXCL6P80162 114 aa2.5□□□□□ -2.01
PTPN4-209ENST00000469511 FABP9Q0Z7S8 132 aa2.5□□□□□ -2.01
PTPN4-209ENST00000469511 IGFL1Q6UW32 110 aa2.5□□□□□ -2.01
PTPN4-209ENST00000469511 C18orf32Q8TCD1 76 aa2.5□□□□□ -2.01
PTPN4-209ENST00000469511 COX7BP24311 80 aa2.49□□□□□ -2.01
PTPN4-209ENST00000469511 ELOF1P60002 83 aaKnown RBP2.49□□□□□ -2.01
PTPN4-209ENST00000469511 C6orf99Q4VX62 202 aa2.49□□□□□ -2.01
PTPN4-209ENST00000469511 OR13C6PQ8NH95 151 aa2.49□□□□□ -2.01
PTPN4-209ENST00000469511 IGLV5-48A0A075B6I7 105 aa2.48□□□□□ -2.01
PTPN4-209ENST00000469511 LINC00587B1AMM8 73 aa2.48□□□□□ -2.01
PTPN4-209ENST00000469511 HINT1P49773 126 aaPredicted RBP2.48□□□□□ -2.01
PTPN4-209ENST00000469511 TRAV12-1A0A0B4J245 112 aa2.47□□□□□ -2.01
PTPN4-209ENST00000469511 TRBV7-7A0A0K0K1E9 115 aa2.47□□□□□ -2.01
PTPN4-209ENST00000469511 LEPROTO15243 131 aa2.47□□□□□ -2.01
PTPN4-209ENST00000469511 RHEBQ15382 184 aa2.47□□□□□ -2.01
PTPN4-209ENST00000469511 IFI27L1Q96BM0 104 aa2.47□□□□□ -2.01
PTPN4-209ENST00000469511 MIEN1Q9BRT3 115 aa2.47□□□□□ -2.01
PTPN4-209ENST00000469511 A0A0J9YXY3 114 aa2.46□□□□□ -2.02
PTPN4-209ENST00000469511 A6NN06 94 aa2.46□□□□□ -2.02
PTPN4-209ENST00000469511 E9PLD3 99 aa2.46□□□□□ -2.02
PTPN4-209ENST00000469511 H0Y8G0 127 aa2.46□□□□□ -2.02
PTPN4-209ENST00000469511 J3QQQ9 107 aa2.46□□□□□ -2.02
PTPN4-209ENST00000469511 RBM12B-AS1Q9P1G2 102 aa2.46□□□□□ -2.02
PTPN4-209ENST00000469511 MT1BP07438 61 aa2.45□□□□□ -2.02
PTPN4-209ENST00000469511 LCE1EQ5T753 118 aa2.45□□□□□ -2.02
PTPN4-209ENST00000469511 Q6ZVH6 145 aa2.45□□□□□ -2.02
PTPN4-209ENST00000469511 COMMD7Q86VX2 200 aa2.45□□□□□ -2.02
PTPN4-209ENST00000469511 LINC00308Q8TCZ7 52 aa2.45□□□□□ -2.02
PTPN4-209ENST00000469511 PMCHL2Q9BQD1 86 aa2.45□□□□□ -2.02
PTPN4-209ENST00000469511 KRTAP10-7P60409 375 aaPredicted RBP2.44□□□□□ -2.02
PTPN4-209ENST00000469511 SEC11CQ9BY50 192 aa2.44□□□□□ -2.02
PTPN4-209ENST00000469511 KRTAP2-1Q9BYU5 128 aa2.44□□□□□ -2.02
PTPN4-209ENST00000469511 A8MWP4 228 aa2.43□□□□□ -2.02
PTPN4-209ENST00000469511 LST1O00453 97 aa2.43□□□□□ -2.02
PTPN4-209ENST00000469511 SERF1AO75920 110 aa2.43□□□□□ -2.02
PTPN4-209ENST00000469511 SPANXCQ9NY87 97 aa2.43□□□□□ -2.02
PTPN4-209ENST00000469511 SPRR2EP22531 72 aa2.42□□□□□ -2.02
PTPN4-209ENST00000469511 SPRR2BP35325 72 aa2.42□□□□□ -2.02
PTPN4-209ENST00000469511 SPRR2AP35326 72 aa2.42□□□□□ -2.02
PTPN4-209ENST00000469511 KRTAP10-5P60370 271 aa2.42□□□□□ -2.02
PTPN4-209ENST00000469511 SPANXDQ9BXN6 97 aa2.42□□□□□ -2.02
PTPN4-209ENST00000469511 TRAPPC1Q9Y5R8 145 aa2.42□□□□□ -2.02
PTPN4-209ENST00000469511 A0A1B0GWB2 263 aa2.41□□□□□ -2.02
PTPN4-209ENST00000469511 NMUP48645 174 aa2.41□□□□□ -2.02
PTPN4-209ENST00000469511 IFITM2Q01629 132 aa2.41□□□□□ -2.02
PTPN4-209ENST00000469511 OCIAD2Q56VL3 154 aa2.41□□□□□ -2.02
PTPN4-209ENST00000469511 LCE3CQ5T5A8 94 aa2.41□□□□□ -2.02
PTPN4-209ENST00000469511 CLEC2BQ92478 149 aa2.41□□□□□ -2.02
PTPN4-209ENST00000469511 TTTY13Q9BZ97 58 aa2.41□□□□□ -2.02
PTPN4-209ENST00000469511 TRBV7-6A0A0J9YX20 115 aa2.4□□□□□ -2.03
PTPN4-209ENST00000469511 H3BUT2 72 aa2.4□□□□□ -2.03
PTPN4-209ENST00000469511 S100PP25815 95 aa2.4□□□□□ -2.03
PTPN4-209ENST00000469511 COX19Q49B96 90 aa2.4□□□□□ -2.03
PTPN4-209ENST00000469511 CBY1Q9Y3M2 126 aa2.4□□□□□ -2.03
PTPN4-209ENST00000469511 TMEM218A2RU14 115 aa2.39□□□□□ -2.03
PTPN4-209ENST00000469511 F8WEM9 126 aa2.39□□□□□ -2.03
PTPN4-209ENST00000469511 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
PTPN4-209ENST00000469511 COLCA2A8K830 154 aa2.38□□□□□ -2.03
PTPN4-209ENST00000469511 DPM2O94777 84 aa2.38□□□□□ -2.03
PTPN4-209ENST00000469511 IGKCP01834 107 aa2.38□□□□□ -2.03
PTPN4-209ENST00000469511 Q6JHZ5 121 aa2.38□□□□□ -2.03
PTPN4-209ENST00000469511 Q6ZQY7 126 aa2.38□□□□□ -2.03
PTPN4-209ENST00000469511 SMIM11BQ8TCY0 68 aa2.38□□□□□ -2.03
PTPN4-209ENST00000469511 CHCHD1Q96BP2 118 aaKnown RBP2.38□□□□□ -2.03
PTPN4-209ENST00000469511 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
PTPN4-209ENST00000469511 A6NDN8 102 aa2.37□□□□□ -2.03
PTPN4-209ENST00000469511 FABP4P15090 132 aa2.37□□□□□ -2.03
PTPN4-209ENST00000469511 SPINK7P58062 85 aa2.37□□□□□ -2.03
PTPN4-209ENST00000469511 LINC00313P59037 77 aa2.37□□□□□ -2.03
PTPN4-209ENST00000469511 HERVK_113P61574 105 aa2.37□□□□□ -2.03
PTPN4-209ENST00000469511 SLC7A5P1Q8MH63 180 aa2.37□□□□□ -2.03
PTPN4-209ENST00000469511 A0A087WSZ3 146 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 A0A1W2PNM2 257 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 A8MU10 97 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 TIMM17BO60830 172 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 HSBP1O75506 76 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 LEPROTL1O95214 131 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 PLNP26678 52 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 DEFB116Q30KQ4 102 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 LINC00575Q6W349 94 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 CEND1Q8N111 149 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 MTURNQ8N3F0 131 aa2.36□□□□□ -2.03
PTPN4-209ENST00000469511 TRAV13-2A0A0B4J235 113 aa2.35□□□□□ -2.03
PTPN4-209ENST00000469511 WFDC13Q8IUB5 93 aa2.35□□□□□ -2.03
PTPN4-209ENST00000469511 HSPB8Q9UJY1 196 aa2.35□□□□□ -2.03
PTPN4-209ENST00000469511 ZNF815PA8K554 130 aa2.34□□□□□ -2.03
PTPN4-209ENST00000469511 Q5VV11 94 aa2.34□□□□□ -2.03
PTPN4-209ENST00000469511 MUSTN1Q8IVN3 82 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms