RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 DNAH3Q8TD57 4116 aa3.36□□□□□ -1.87
RIF1-209ENST00000467762 ACANP16112 2415 aa3.35□□□□□ -1.87
RIF1-209ENST00000467762 CNBPP62633 177 aaKnown RBP3.35□□□□□ -1.87
RIF1-209ENST00000467762 LCE1AQ5T7P2 110 aa3.35□□□□□ -1.87
RIF1-209ENST00000467762 DEFB105AQ8NG35 78 aa3.35□□□□□ -1.87
RIF1-209ENST00000467762 TMEM254Q8TBM7 123 aa3.35□□□□□ -1.87
RIF1-209ENST00000467762 CYSTM1Q9H1C7 97 aa3.35□□□□□ -1.87
RIF1-209ENST00000467762 FN1P02751 2386 aaKnown RBP3.35□□□□□ -1.87
RIF1-209ENST00000467762 CMYA5Q8N3K9 4069 aa3.35□□□□□ -1.87
RIF1-209ENST00000467762 C16orf90A8MZG2 172 aa3.34□□□□□ -1.87
RIF1-209ENST00000467762 KRTAP24-1Q3LI83 254 aa3.34□□□□□ -1.87
RIF1-209ENST00000467762 Q8N9P0 234 aaPredicted RBP3.34□□□□□ -1.87
RIF1-209ENST00000467762 Q9BRP9 147 aa3.34□□□□□ -1.87
RIF1-209ENST00000467762 LINC00474Q9P2X8 69 aa3.34□□□□□ -1.87
RIF1-209ENST00000467762 ZNF706Q9Y5V0 76 aaPredicted RBP3.34□□□□□ -1.87
RIF1-209ENST00000467762 NOTCH2Q04721 2471 aa3.33□□□□□ -1.88
RIF1-209ENST00000467762 UNC79Q9P2D8 2635 aa3.33□□□□□ -1.88
RIF1-209ENST00000467762 ITPR2Q14571 2701 aa3.33□□□□□ -1.88
RIF1-209ENST00000467762 LCE6AA0A183 80 aa3.33□□□□□ -1.88
RIF1-209ENST00000467762 A0A1W2PNM2 257 aa3.33□□□□□ -1.88
RIF1-209ENST00000467762 KRTAP29-1A8MX34 341 aaPredicted RBP3.33□□□□□ -1.88
RIF1-209ENST00000467762 UBE2BP63146 152 aa3.33□□□□□ -1.88
RIF1-209ENST00000467762 MTORP42345 2549 aa3.33□□□□□ -1.88
RIF1-209ENST00000467762 GCN1Q92616 2671 aaKnown RBP3.32□□□□□ -1.88
RIF1-209ENST00000467762 NDUFB1O75438 58 aa3.32□□□□□ -1.88
RIF1-209ENST00000467762 SPRR1BP22528 89 aa3.32□□□□□ -1.88
RIF1-209ENST00000467762 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
RIF1-209ENST00000467762 SMIM29Q86T20 159 aa3.32□□□□□ -1.88
RIF1-209ENST00000467762 SETD2Q9BYW2 2564 aaPredicted RBP3.31□□□□□ -1.88
RIF1-209ENST00000467762 C3orf84H3BNL1 204 aa3.31□□□□□ -1.88
RIF1-209ENST00000467762 H3BPC8 53 aa3.31□□□□□ -1.88
RIF1-209ENST00000467762 SCXQ7RTU7 201 aa3.31□□□□□ -1.88
RIF1-209ENST00000467762 SNURFQ9Y675 71 aa3.31□□□□□ -1.88
RIF1-209ENST00000467762 NIPBLQ6KC79 2804 aaeCLIP3.31□□□□□ -1.88
RIF1-209ENST00000467762 TEP1Q99973 2627 aaKnown RBP3.31□□□□□ -1.88
RIF1-209ENST00000467762 DNAH1Q9P2D7 4330 aa3.31□□□□□ -1.88
RIF1-209ENST00000467762 NBEAL2Q6ZNJ1 2754 aa3.3□□□□□ -1.88
RIF1-209ENST00000467762 FAM168BA1KXE4 195 aa3.3□□□□□ -1.88
RIF1-209ENST00000467762 PSCAO43653 123 aa3.3□□□□□ -1.88
RIF1-209ENST00000467762 RPL37AP61513 92 aaKnown RBP3.3□□□□□ -1.88
RIF1-209ENST00000467762 Q5XG85 94 aa3.3□□□□□ -1.88
RIF1-209ENST00000467762 NSD1Q96L73 2696 aaPredicted RBP3.3□□□□□ -1.88
RIF1-209ENST00000467762 A0A087X002 238 aa3.29□□□□□ -1.88
RIF1-209ENST00000467762 HCG22E2RYF7 251 aa3.29□□□□□ -1.88
RIF1-209ENST00000467762 K7EIL1 84 aa3.29□□□□□ -1.88
RIF1-209ENST00000467762 UBE2AP49459 152 aa3.29□□□□□ -1.88
RIF1-209ENST00000467762 DSCR10P59022 87 aa3.29□□□□□ -1.88
RIF1-209ENST00000467762 KRTAP7-1Q8IUC3 87 aa3.29□□□□□ -1.88
RIF1-209ENST00000467762 ST20-AS1Q8NBB2 130 aa3.29□□□□□ -1.88
RIF1-209ENST00000467762 FASNP49327 2511 aaKnown RBP3.29□□□□□ -1.88
RIF1-209ENST00000467762 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.28□□□□□ -1.88
RIF1-209ENST00000467762 KRTAP16-1A8MUX0 517 aa3.28□□□□□ -1.88
RIF1-209ENST00000467762 IGKV2-30P06310 120 aa3.28□□□□□ -1.88
RIF1-209ENST00000467762 LINC00313P59037 77 aa3.28□□□□□ -1.88
RIF1-209ENST00000467762 IGFL1Q6UW32 110 aa3.28□□□□□ -1.88
RIF1-209ENST00000467762 UBE2DNLQ8IWF7 75 aa3.28□□□□□ -1.88
RIF1-209ENST00000467762 B9D2Q9BPU9 175 aa3.28□□□□□ -1.88
RIF1-209ENST00000467762 HELZ2Q9BYK8 2649 aaKnown RBP3.28□□□□□ -1.88
RIF1-209ENST00000467762 ANK2Q01484 3957 aa3.27□□□□□ -1.89
RIF1-209ENST00000467762 A0A096LNI7 61 aa3.27□□□□□ -1.89
RIF1-209ENST00000467762 hDV103S1A0JD37 113 aa3.27□□□□□ -1.89
RIF1-209ENST00000467762 Q8N9L7 120 aa3.27□□□□□ -1.89
RIF1-209ENST00000467762 C9orf163Q8N9P6 203 aa3.27□□□□□ -1.89
RIF1-209ENST00000467762 ZCCHC13Q8WW36 166 aaKnown RBP3.27□□□□□ -1.89
RIF1-209ENST00000467762 CYP4F30PQ9H0H9 118 aa3.27□□□□□ -1.89
RIF1-209ENST00000467762 APLNQ9ULZ1 77 aa3.27□□□□□ -1.89
RIF1-209ENST00000467762 OTOGQ6ZRI0 2925 aa3.27□□□□□ -1.89
RIF1-209ENST00000467762 VWFP04275 2813 aa3.27□□□□□ -1.89
RIF1-209ENST00000467762 NUPR2A6NF83 97 aa3.26□□□□□ -1.89
RIF1-209ENST00000467762 SPANXA2-OT1Q8N9U9 137 aa3.26□□□□□ -1.89
RIF1-209ENST00000467762 HIGD2AQ9BW72 106 aa3.26□□□□□ -1.89
RIF1-209ENST00000467762 DYNC2H1Q8NCM8 4307 aaKnown RBP3.25□□□□□ -1.89
RIF1-209ENST00000467762 TRRAPQ9Y4A5 3859 aa3.25□□□□□ -1.89
RIF1-209ENST00000467762 A0A1W2PNN7 141 aa3.25□□□□□ -1.89
RIF1-209ENST00000467762 A8MUN3 132 aa3.25□□□□□ -1.89
RIF1-209ENST00000467762 A8MWP4 228 aa3.25□□□□□ -1.89
RIF1-209ENST00000467762 K7EQZ3 153 aa3.25□□□□□ -1.89
RIF1-209ENST00000467762 HRCT1Q6UXD1 115 aa3.25□□□□□ -1.89
RIF1-209ENST00000467762 PRR15Q8IV56 129 aa3.25□□□□□ -1.89
RIF1-209ENST00000467762 HIVEP1P15822 2718 aa3.24□□□□□ -1.89
RIF1-209ENST00000467762 A0A087WSZ3 146 aa3.24□□□□□ -1.89
RIF1-209ENST00000467762 IGKV2-24A0A0C4DH68 120 aa3.24□□□□□ -1.89
RIF1-209ENST00000467762 TP53AIP1Q9HCN2 124 aa3.24□□□□□ -1.89
RIF1-209ENST00000467762 ATRQ13535 2644 aa3.24□□□□□ -1.89
RIF1-209ENST00000467762 HUWE1Q7Z6Z7 4374 aaKnown RBP3.23□□□□□ -1.89
RIF1-209ENST00000467762 TENM1Q9UKZ4 2725 aa3.23□□□□□ -1.89
RIF1-209ENST00000467762 NBDYA0A0U1RRE5 68 aa3.23□□□□□ -1.89
RIF1-209ENST00000467762 LRCOL1A6NCL2 159 aa3.23□□□□□ -1.89
RIF1-209ENST00000467762 PRLHP81277 87 aa3.23□□□□□ -1.89
RIF1-209ENST00000467762 Q1T7F1 81 aa3.23□□□□□ -1.89
RIF1-209ENST00000467762 CASC2Q6XLA1 102 aa3.23□□□□□ -1.89
RIF1-209ENST00000467762 FP248Q71RG6 208 aaPredicted RBP3.23□□□□□ -1.89
RIF1-209ENST00000467762 LINC00472Q9H8W2 130 aa3.23□□□□□ -1.89
RIF1-209ENST00000467762 TRAV22A0A0B4J277 110 aa3.22□□□□□ -1.89
RIF1-209ENST00000467762 LINC00483Q53H64 154 aa3.22□□□□□ -1.89
RIF1-209ENST00000467762 KTN1-AS1Q86SY8 53 aa3.22□□□□□ -1.89
RIF1-209ENST00000467762 KRTAP13-1Q8IUC0 172 aa3.22□□□□□ -1.89
RIF1-209ENST00000467762 C8orf17Q9NRJ1 99 aa3.22□□□□□ -1.89
RIF1-209ENST00000467762 K7ERS5 55 aa3.21□□□□□ -1.9
RIF1-209ENST00000467762 MOBPQ13875 183 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms