RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 NDUFV3P56181 108 aaKnown RBP7.82□□□□□ -1.16
COL4A1-202ENST00000467182 LINC00483Q53H64 154 aa7.82□□□□□ -1.16
COL4A1-202ENST00000467182 KRTAP17-1Q9BYP8 105 aa7.82□□□□□ -1.16
COL4A1-202ENST00000467182 GAGE2AQ6NT46 116 aa7.81□□□□□ -1.16
COL4A1-202ENST00000467182 BIRC6Q9NR09 4857 aa7.8□□□□□ -1.16
COL4A1-202ENST00000467182 LAMTOR3Q9UHA4 124 aa7.8□□□□□ -1.16
COL4A1-202ENST00000467182 A0A1B0GV72 72 aa7.79□□□□□ -1.16
COL4A1-202ENST00000467182 JMJD7-PLA2G4BH0Y9G9 81 aa7.79□□□□□ -1.16
COL4A1-202ENST00000467182 ZNF706Q9Y5V0 76 aaPredicted RBP7.79□□□□□ -1.16
COL4A1-202ENST00000467182 C14orf132Q9NPU4 83 aa7.77□□□□□ -1.17
COL4A1-202ENST00000467182 ANAPC11Q9NYG5 84 aa7.77□□□□□ -1.17
COL4A1-202ENST00000467182 IGLV8-61A0A075B6I0 122 aa7.76□□□□□ -1.17
COL4A1-202ENST00000467182 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
COL4A1-202ENST00000467182 RBM3P98179 157 aaKnown RBP7.76□□□□□ -1.17
COL4A1-202ENST00000467182 SPINK6Q6UWN8 80 aa7.76□□□□□ -1.17
COL4A1-202ENST00000467182 TRBV7-4A0A0J9YYF1 115 aa7.75□□□□□ -1.17
COL4A1-202ENST00000467182 LOC110117498A0A087WWA1 95 aa7.74□□□□□ -1.17
COL4A1-202ENST00000467182 Q5VSD8 79 aa7.73□□□□□ -1.17
COL4A1-202ENST00000467182 Q6ZQT0 140 aa7.73□□□□□ -1.17
COL4A1-202ENST00000467182 FAM229AH3BQW9 127 aa7.72□□□□□ -1.17
COL4A1-202ENST00000467182 PLA2G1BP04054 148 aaKnown RBP7.72□□□□□ -1.17
COL4A1-202ENST00000467182 DSCR8Q96T75 97 aa7.71□□□□□ -1.18
COL4A1-202ENST00000467182 A0A087X002 238 aa7.7□□□□□ -1.18
COL4A1-202ENST00000467182 A0A0G2JQZ4 141 aa7.7□□□□□ -1.18
COL4A1-202ENST00000467182 F8WEM9 126 aa7.7□□□□□ -1.18
COL4A1-202ENST00000467182 CCKP06307 115 aa7.7□□□□□ -1.18
COL4A1-202ENST00000467182 FAM229BQ4G0N7 80 aa7.7□□□□□ -1.18
COL4A1-202ENST00000467182 IGFL1Q6UW32 110 aa7.7□□□□□ -1.18
COL4A1-202ENST00000467182 IGLV9-49A0A0B4J1Y8 123 aa7.69□□□□□ -1.18
COL4A1-202ENST00000467182 KRTAP13-2Q52LG2 175 aa7.69□□□□□ -1.18
COL4A1-202ENST00000467182 Q8N1X5 172 aa7.69□□□□□ -1.18
COL4A1-202ENST00000467182 A0A1W2PNM2 257 aa7.68□□□□□ -1.18
COL4A1-202ENST00000467182 PDE6GP18545 87 aa7.68□□□□□ -1.18
COL4A1-202ENST00000467182 HERC2O95714 4834 aa7.68□□□□□ -1.18
COL4A1-202ENST00000467182 FAT3Q8TDW7 4589 aa7.68□□□□□ -1.18
COL4A1-202ENST00000467182 MOBPQ13875 183 aa7.67□□□□□ -1.18
COL4A1-202ENST00000467182 K7ERU9 68 aa7.66□□□□□ -1.18
COL4A1-202ENST00000467182 C9orf153Q5TBE3 101 aa7.66□□□□□ -1.18
COL4A1-202ENST00000467182 Q6JHZ5 121 aa7.66□□□□□ -1.18
COL4A1-202ENST00000467182 Q8NBF4 154 aa7.66□□□□□ -1.18
COL4A1-202ENST00000467182 FAM240AA0A1B0GVK7 77 aa7.65□□□□□ -1.18
COL4A1-202ENST00000467182 J3QR89 54 aa7.65□□□□□ -1.18
COL4A1-202ENST00000467182 CRYGAP11844 174 aa7.63□□□□□ -1.19
COL4A1-202ENST00000467182 C21orf62-AS1Q17RA5 79 aa7.63□□□□□ -1.19
COL4A1-202ENST00000467182 Q6Q795 121 aa7.63□□□□□ -1.19
COL4A1-202ENST00000467182 SSBP3-AS1Q7Z2R9 100 aa7.62□□□□□ -1.19
COL4A1-202ENST00000467182 VPS25Q9BRG1 176 aa7.62□□□□□ -1.19
COL4A1-202ENST00000467182 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
COL4A1-202ENST00000467182 ACYP1P07311 99 aa7.61□□□□□ -1.19
COL4A1-202ENST00000467182 LINC00846Q9NV44 126 aa7.61□□□□□ -1.19
COL4A1-202ENST00000467182 PRR26Q8N8Z3 221 aa7.6□□□□□ -1.19
COL4A1-202ENST00000467182 CDIP1Q9H305 208 aa7.6□□□□□ -1.19
COL4A1-202ENST00000467182 TNXBP22105 4242 aa7.6□□□□□ -1.19
COL4A1-202ENST00000467182 A0A1B0GW54 56 aa7.58□□□□□ -1.2
COL4A1-202ENST00000467182 KRTAP4-5Q9BYR2 181 aa7.58□□□□□ -1.2
COL4A1-202ENST00000467182 TRBV7-7A0A0K0K1E9 115 aa7.56□□□□□ -1.2
COL4A1-202ENST00000467182 ABCA13Q86UQ4 5058 aa7.56□□□□□ -1.2
COL4A1-202ENST00000467182 CD164Q04900 197 aa7.55□□□□□ -1.2
COL4A1-202ENST00000467182 HRCT1Q6UXD1 115 aa7.55□□□□□ -1.2
COL4A1-202ENST00000467182 TYMSOSQ8TAI1 123 aa7.55□□□□□ -1.2
COL4A1-202ENST00000467182 A0A087WSZ3 146 aa7.54□□□□□ -1.2
COL4A1-202ENST00000467182 Q6ZVQ6 151 aa7.53□□□□□ -1.2
COL4A1-202ENST00000467182 KRTAP10-8P60410 259 aa7.52□□□□□ -1.21
COL4A1-202ENST00000467182 MYCBP2O75592 4640 aa7.5□□□□□ -1.21
COL4A1-202ENST00000467182 UBL5Q9BZL1 73 aa7.5□□□□□ -1.21
COL4A1-202ENST00000467182 NREPQ16612 68 aa7.48□□□□□ -1.21
COL4A1-202ENST00000467182 LINC00643Q86TS7 51 aa7.48□□□□□ -1.21
COL4A1-202ENST00000467182 LINC00304Q8N9R0 145 aa7.48□□□□□ -1.21
COL4A1-202ENST00000467182 Q5XG85 94 aa7.47□□□□□ -1.21
COL4A1-202ENST00000467182 Q96NJ1 140 aa7.47□□□□□ -1.21
COL4A1-202ENST00000467182 LINC00472Q9H8W2 130 aa7.47□□□□□ -1.21
COL4A1-202ENST00000467182 MT1HL1P0DM35 61 aa7.46□□□□□ -1.22
COL4A1-202ENST00000467182 MT-ATP8P03928 68 aa7.45□□□□□ -1.22
COL4A1-202ENST00000467182 ASB16-AS1Q495Z4 193 aa7.45□□□□□ -1.22
COL4A1-202ENST00000467182 SS18L2Q9UHA2 77 aa7.45□□□□□ -1.22
COL4A1-202ENST00000467182 SPINK1P00995 79 aa7.44□□□□□ -1.22
COL4A1-202ENST00000467182 RPS29P62273 56 aaKnown RBP7.44□□□□□ -1.22
COL4A1-202ENST00000467182 LCE2DQ5TA82 110 aaPredicted RBP7.44□□□□□ -1.22
COL4A1-202ENST00000467182 SPAG11AQ6PDA7 123 aa7.44□□□□□ -1.22
COL4A1-202ENST00000467182 C4orf48Q5BLP8 95 aa7.43□□□□□ -1.22
COL4A1-202ENST00000467182 FLG2Q5D862 2391 aaPredicted RBP7.43□□□□□ -1.22
COL4A1-202ENST00000467182 IGKV3D-7A0A0C4DH55 119 aa7.42□□□□□ -1.22
COL4A1-202ENST00000467182 OXTP01178 125 aa7.42□□□□□ -1.22
COL4A1-202ENST00000467182 DEFB116Q30KQ4 102 aa7.42□□□□□ -1.22
COL4A1-202ENST00000467182 DSCR10P59022 87 aa7.41□□□□□ -1.22
COL4A1-202ENST00000467182 CXCL6P80162 114 aa7.41□□□□□ -1.22
COL4A1-202ENST00000467182 ATP5EP2Q5VTU8 51 aa7.41□□□□□ -1.22
COL4A1-202ENST00000467182 BPY2O14599 106 aa7.4□□□□□ -1.22
COL4A1-202ENST00000467182 LIMD2Q9BT23 127 aa7.4□□□□□ -1.22
COL4A1-202ENST00000467182 KRTAP29-1A8MX34 341 aaPredicted RBP7.39□□□□□ -1.23
COL4A1-202ENST00000467182 C1orf195Q5TG92 126 aa7.39□□□□□ -1.23
COL4A1-202ENST00000467182 SIGMAR1Q99720 223 aa7.39□□□□□ -1.23
COL4A1-202ENST00000467182 Q8N9L7 120 aa7.36□□□□□ -1.23
COL4A1-202ENST00000467182 J3KT08 172 aa7.35□□□□□ -1.23
COL4A1-202ENST00000467182 K7EQZ3 153 aa7.35□□□□□ -1.23
COL4A1-202ENST00000467182 IGKV4-1P06312 121 aa7.35□□□□□ -1.23
COL4A1-202ENST00000467182 IMUPQ9GZP8 106 aa7.34□□□□□ -1.23
COL4A1-202ENST00000467182 A8MWP4 228 aa7.33□□□□□ -1.24
COL4A1-202ENST00000467182 PCLOQ9Y6V0 5065 aa7.33□□□□□ -1.24
COL4A1-202ENST00000467182 A0A087WVE0 104 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms