RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ETDCA0A1B0GVM5 59 aa1.2□□□□□ -2.22
XRN1-206ENST00000467077 F8W036 122 aa1.2□□□□□ -2.22
XRN1-206ENST00000467077 NPYP01303 97 aa1.2□□□□□ -2.22
XRN1-206ENST00000467077 MT2AP02795 61 aa1.2□□□□□ -2.22
XRN1-206ENST00000467077 RPL37P61927 97 aaKnown RBP1.2□□□□□ -2.22
XRN1-206ENST00000467077 KRTAP19-6Q3LI70 58 aa1.2□□□□□ -2.22
XRN1-206ENST00000467077 Q8NDZ9 215 aa1.2□□□□□ -2.22
XRN1-206ENST00000467077 AMELXQ99217 191 aa1.2□□□□□ -2.22
XRN1-206ENST00000467077 LIMD2Q9BT23 127 aa1.2□□□□□ -2.22
XRN1-206ENST00000467077 CYSLTR1Q9Y271 337 aa1.2□□□□□ -2.22
XRN1-206ENST00000467077 C20orf202A1L168 122 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 IGIPA6NJ69 53 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 HSBP1L1C9JCN9 74 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 SMLR1H3BR10 107 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 NCR3O14931 201 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 ERC2-IT1O76042 136 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 MT1FP04733 61 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 SPINK8P0C7L1 97 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 S100A12P80511 92 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 ZNF345Q14585 488 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 LINC00299Q6ZSB3 139 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 ZNF625Q96I27 306 aaPredicted RBP1.19□□□□□ -2.22
XRN1-206ENST00000467077 BATF3Q9NR55 127 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 NAT8BQ9UHF3 227 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 ERG28Q9UKR5 140 aa1.19□□□□□ -2.22
XRN1-206ENST00000467077 TRBV20-1A0A075B6N2 111 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 TRAV9-1A0A075B6T8 112 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 SMIM27A0A1W2PRY6 76 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 HMSDA8MTL9 139 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 H7C2G1 150 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 PPBPP02775 128 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 S100A8P05109 93 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 COX17Q14061 63 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 ATP11AUNQ6ZP68 121 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 PRELID3AQ96N28 172 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 SMIM7Q9BQ49 75 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 MAP1LC3AQ9H492 121 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 OSTCQ9NRP0 149 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 V9GYV3 84 aa1.18□□□□□ -2.22
XRN1-206ENST00000467077 FAM236DA0A1B0GTK5 79 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 TINCRA0A1B0GVN0 87 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 H3BRM9 83 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 FAM236CP0DP71 79 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 G0S2P27469 103 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 SPRR1AP35321 89 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 LINC00158P58513 81 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 MRPL54Q6P161 138 aaKnown RBP1.17□□□□□ -2.22
XRN1-206ENST00000467077 BOD1L2Q8IYS8 172 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 Q8N8P6 123 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 SCGB3A1Q96QR1 104 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 Q9BRP9 147 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 KCNQ1DNQ9H478 68 aa1.17□□□□□ -2.22
XRN1-206ENST00000467077 MUC12Q9UKN1 5478 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 TRBV10-3A0A0K0K1G6 114 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 K7EMI3 77 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 ADCYAP1P18509 176 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 NDUFA6P56556 154 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 KRTAP12-1P59990 96 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 JOSD1Q15040 202 aaPredicted RBP1.16□□□□□ -2.22
XRN1-206ENST00000467077 ADIRFQ15847 76 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 C1orf195Q5TG92 126 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 Q6ZRX8 168 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 TOMM6Q96B49 74 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 CST9LQ9H4G1 147 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 LAMTOR2Q9Y2Q5 125 aa1.16□□□□□ -2.22
XRN1-206ENST00000467077 SMIM13P0DJ93 91 aa1.15□□□□□ -2.23
XRN1-206ENST00000467077 DDTP30046 118 aa1.15□□□□□ -2.23
XRN1-206ENST00000467077 MEIG1Q5JSS6 88 aa1.15□□□□□ -2.23
XRN1-206ENST00000467077 S100A7L2Q5SY68 101 aa1.15□□□□□ -2.23
XRN1-206ENST00000467077 SFTA2Q6UW10 78 aa1.15□□□□□ -2.23
XRN1-206ENST00000467077 ALKAL2Q6UX46 152 aa1.15□□□□□ -2.23
XRN1-206ENST00000467077 DEFB105AQ8NG35 78 aa1.15□□□□□ -2.23
XRN1-206ENST00000467077 OBSCN-AS1Q96MR7 158 aa1.15□□□□□ -2.23
XRN1-206ENST00000467077 PRO1933Q9H354 126 aa1.15□□□□□ -2.23
XRN1-206ENST00000467077 NXT2Q9NPJ8 142 aaKnown RBP1.15□□□□□ -2.23
XRN1-206ENST00000467077 LAMTOR3Q9UHA4 124 aa1.15□□□□□ -2.23
XRN1-206ENST00000467077 TRAV23DV6A0A075B6W5 121 aa1.14□□□□□ -2.23
XRN1-206ENST00000467077 A0A0G2JQZ4 141 aa1.14□□□□□ -2.23
XRN1-206ENST00000467077 TCL1BO95988 128 aa1.14□□□□□ -2.23
XRN1-206ENST00000467077 SRP19P09132 144 aaKnown RBP1.14□□□□□ -2.23
XRN1-206ENST00000467077 KRTAP2-3P0C7H8 128 aa1.14□□□□□ -2.23
XRN1-206ENST00000467077 HINT1P49773 126 aaPredicted RBP1.14□□□□□ -2.23
XRN1-206ENST00000467077 AKR1D1P51857 326 aa1.14□□□□□ -2.23
XRN1-206ENST00000467077 TMEM170BQ5T4T1 132 aa1.14□□□□□ -2.23
XRN1-206ENST00000467077 ATP5L2Q7Z4Y8 100 aa1.14□□□□□ -2.23
XRN1-206ENST00000467077 Q96NJ1 140 aa1.14□□□□□ -2.23
XRN1-206ENST00000467077 KRTAP2-4Q9BYR9 128 aa1.14□□□□□ -2.23
XRN1-206ENST00000467077 LOC107984156A0A0G2JMH3 177 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 LINC01549A6NIU2 74 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 C11orf86A6NJI1 115 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 IGLC3P0DOY3 106 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 SPRR1BP22528 89 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 LINC00313P59037 77 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 RGS21Q2M5E4 152 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 Q5XG85 94 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 SCGB1D4Q6XE38 83 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 SLC51BQ86UW2 128 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 ARL17AQ8IVW1 177 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 MIEN1Q9BRT3 115 aa1.13□□□□□ -2.23
XRN1-206ENST00000467077 SMCO4Q9NRQ5 59 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms