RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 CUBNO60494 3623 aa-0.54□□□□□ -2.5
CCDC93-205ENST00000466171 PIK3C2BO00750 1634 aa-0.55□□□□□ -2.5
CCDC93-205ENST00000466171 KANTRA0A1W2PQU2 76 aa-0.55□□□□□ -2.5
CCDC93-205ENST00000466171 C9orf92A6NGG3 77 aa-0.55□□□□□ -2.5
CCDC93-205ENST00000466171 MAGI3Q5TCQ9 1506 aa-0.55□□□□□ -2.5
CCDC93-205ENST00000466171 PPLO60437 1756 aa-0.55□□□□□ -2.5
CCDC93-205ENST00000466171 ANK3Q12955 4377 aaKnown RBP-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 H0YAA0 97 aa-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 NDUFA4O00483 81 aa-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 MT1AP04731 61 aa-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 IFI6P09912 130 aa-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 APOBP04114 4563 aaKnown RBP-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 ARFGEF2Q9Y6D5 1785 aa-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 USH2AO75445 5202 aa-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 HIVEP1P15822 2718 aa-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 HTTP42858 3142 aa-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 DEPDC5O75140 1603 aa-0.56□□□□□ -2.5
CCDC93-205ENST00000466171 DIP2BQ9P265 1576 aa-0.57□□□□□ -2.5
CCDC93-205ENST00000466171 VPS13DQ5THJ4 4388 aa-0.57□□□□□ -2.5
CCDC93-205ENST00000466171 LCE6AA0A183 80 aa-0.57□□□□□ -2.5
CCDC93-205ENST00000466171 MT4P47944 62 aa-0.57□□□□□ -2.5
CCDC93-205ENST00000466171 NREPQ16612 68 aa-0.57□□□□□ -2.5
CCDC93-205ENST00000466171 TDRG1Q3Y452 100 aa-0.57□□□□□ -2.5
CCDC93-205ENST00000466171 WIZO95785 1651 aa-0.57□□□□□ -2.5
CCDC93-205ENST00000466171 UACAQ9BZF9 1416 aa-0.57□□□□□ -2.5
CCDC93-205ENST00000466171 MUC17Q685J3 4493 aa-0.57□□□□□ -2.5
CCDC93-205ENST00000466171 DDX60LQ5H9U9 1706 aaKnown RBP-0.58□□□□□ -2.5
CCDC93-205ENST00000466171 PLCH1Q4KWH8 1693 aa-0.58□□□□□ -2.5
CCDC93-205ENST00000466171 TACC2O95359 2948 aa-0.58□□□□□ -2.5
CCDC93-205ENST00000466171 A0A087WXM4 84 aa-0.58□□□□□ -2.5
CCDC93-205ENST00000466171 IAPPP10997 89 aa-0.58□□□□□ -2.5
CCDC93-205ENST00000466171 PRLHP81277 87 aa-0.58□□□□□ -2.5
CCDC93-205ENST00000466171 DMXL1Q9Y485 3027 aa-0.59□□□□□ -2.5
CCDC93-205ENST00000466171 USP9YO00507 2555 aaPredicted RBP-0.59□□□□□ -2.5
CCDC93-205ENST00000466171 DEFB130BP0DP73 79 aa-0.59□□□□□ -2.5
CCDC93-205ENST00000466171 DEFB130AP0DP74 79 aa-0.59□□□□□ -2.5
CCDC93-205ENST00000466171 ATP5EP2Q5VTU8 51 aa-0.59□□□□□ -2.5
CCDC93-205ENST00000466171 S4R3F8 94 aa-0.59□□□□□ -2.5
CCDC93-205ENST00000466171 RYR3Q15413 4870 aa-0.59□□□□□ -2.5
CCDC93-205ENST00000466171 MAP3K1Q13233 1512 aa-0.59□□□□□ -2.5
CCDC93-205ENST00000466171 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.6□□□□□ -2.5
CCDC93-205ENST00000466171 CCDC88BA6NC98 1476 aa-0.6□□□□□ -2.5
CCDC93-205ENST00000466171 DEFB106AQ8N104 65 aa-0.6□□□□□ -2.51
CCDC93-205ENST00000466171 FASNP49327 2511 aaKnown RBP-0.6□□□□□ -2.51
CCDC93-205ENST00000466171 TEP1Q99973 2627 aaKnown RBP-0.6□□□□□ -2.51
CCDC93-205ENST00000466171 ZZEF1O43149 2961 aa-0.6□□□□□ -2.51
CCDC93-205ENST00000466171 RICTORQ6R327 1708 aa-0.61□□□□□ -2.51
CCDC93-205ENST00000466171 CFAP43Q8NDM7 1665 aa-0.61□□□□□ -2.51
CCDC93-205ENST00000466171 LYNX1G3V0Z9 82 aa-0.61□□□□□ -2.51
CCDC93-205ENST00000466171 SMIM13P0DJ93 91 aa-0.61□□□□□ -2.51
CCDC93-205ENST00000466171 ADIRFQ15847 76 aa-0.61□□□□□ -2.51
CCDC93-205ENST00000466171 ST20Q9HBF5 79 aa-0.61□□□□□ -2.51
CCDC93-205ENST00000466171 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.61□□□□□ -2.51
CCDC93-205ENST00000466171 DNAH11Q96DT5 4516 aa-0.61□□□□□ -2.51
CCDC93-205ENST00000466171 GNG2P59768 71 aa-0.62□□□□□ -2.51
CCDC93-205ENST00000466171 DEFB110Q30KQ9 67 aa-0.62□□□□□ -2.51
CCDC93-205ENST00000466171 HYDINQ4G0P3 5121 aa-0.62□□□□□ -2.51
CCDC93-205ENST00000466171 ITPR3Q14573 2671 aa-0.63□□□□□ -2.51
CCDC93-205ENST00000466171 ANKRD11Q6UB99 2663 aaPredicted RBP-0.63□□□□□ -2.51
CCDC93-205ENST00000466171 GCN1Q92616 2671 aaKnown RBP-0.63□□□□□ -2.51
CCDC93-205ENST00000466171 DSPP15924 2871 aaKnown RBP-0.63□□□□□ -2.51
CCDC93-205ENST00000466171 H3BUT2 72 aa-0.63□□□□□ -2.51
CCDC93-205ENST00000466171 KDM5DQ9BY66 1539 aa-0.64□□□□□ -2.51
CCDC93-205ENST00000466171 ITSN1Q15811 1721 aa-0.64□□□□□ -2.51
CCDC93-205ENST00000466171 S100A13Q99584 98 aa-0.64□□□□□ -2.51
CCDC93-205ENST00000466171 MYO18BQ8IUG5 2567 aa-0.64□□□□□ -2.51
CCDC93-205ENST00000466171 MTORP42345 2549 aa-0.65□□□□□ -2.51
CCDC93-205ENST00000466171 SACSQ9NZJ4 4579 aa-0.65□□□□□ -2.51
CCDC93-205ENST00000466171 LAMA1P25391 3075 aa-0.65□□□□□ -2.51
CCDC93-205ENST00000466171 DEFB131BA0A096LNP1 70 aa-0.65□□□□□ -2.51
CCDC93-205ENST00000466171 MRPL33O75394 65 aaKnown RBP-0.65□□□□□ -2.51
CCDC93-205ENST00000466171 DEFB121Q5J5C9 76 aa-0.65□□□□□ -2.51
CCDC93-205ENST00000466171 DCAF1Q9Y4B6 1507 aa-0.65□□□□□ -2.51
CCDC93-205ENST00000466171 HFM1A2PYH4 1435 aa-0.65□□□□□ -2.51
CCDC93-205ENST00000466171 ANKRD36CQ5JPF3 1778 aa-0.65□□□□□ -2.51
CCDC93-205ENST00000466171 DNAH1Q9P2D7 4330 aa-0.65□□□□□ -2.51
CCDC93-205ENST00000466171 KALRNO60229 2985 aa-0.66□□□□□ -2.51
CCDC93-205ENST00000466171 THOC2Q8NI27 1593 aaKnown RBP-0.66□□□□□ -2.51
CCDC93-205ENST00000466171 UBL5Q9BZL1 73 aa-0.66□□□□□ -2.52
CCDC93-205ENST00000466171 EPPK1P58107 5090 aaKnown RBP-0.66□□□□□ -2.52
CCDC93-205ENST00000466171 ARHGAP35Q9NRY4 1499 aa-0.67□□□□□ -2.52
CCDC93-205ENST00000466171 KIAA0586Q9BVV6 1533 aa-0.67□□□□□ -2.52
CCDC93-205ENST00000466171 ACACAQ13085 2346 aa-0.67□□□□□ -2.52
CCDC93-205ENST00000466171 RB1CC1Q8TDY2 1594 aa-0.67□□□□□ -2.52
CCDC93-205ENST00000466171 CCDC18Q5T9S5 1454 aa-0.67□□□□□ -2.52
CCDC93-205ENST00000466171 RALGAPBQ86X10 1494 aa-0.67□□□□□ -2.52
CCDC93-205ENST00000466171 TJP1Q07157 1748 aa-0.68□□□□□ -2.52
CCDC93-205ENST00000466171 BVES-AS1Q5T3Y7 98 aa-0.68□□□□□ -2.52
CCDC93-205ENST00000466171 ERVK-7P63135 1459 aa-0.68□□□□□ -2.52
CCDC93-205ENST00000466171 DNAH2Q9P225 4427 aa-0.68□□□□□ -2.52
CCDC93-205ENST00000466171 KIAA1109Q2LD37 5005 aa-0.69□□□□□ -2.52
CCDC93-205ENST00000466171 ZC3H13Q5T200 1668 aaKnown RBP-0.69□□□□□ -2.52
CCDC93-205ENST00000466171 ABCC1P33527 1531 aa-0.69□□□□□ -2.52
CCDC93-205ENST00000466171 SMARCA2P51531 1590 aa-0.69□□□□□ -2.52
CCDC93-205ENST00000466171 HMGA1P17096 107 aaKnown RBP-0.69□□□□□ -2.52
CCDC93-205ENST00000466171 KCNQ1DNQ9H478 68 aa-0.69□□□□□ -2.52
CCDC93-205ENST00000466171 RYR1P21817 5038 aa-0.69□□□□□ -2.52
CCDC93-205ENST00000466171 MED14O60244 1454 aa-0.69□□□□□ -2.52
CCDC93-205ENST00000466171 PARP4Q9UKK3 1724 aaKnown RBP-0.69□□□□□ -2.52
CCDC93-205ENST00000466171 MGAM2Q2M2H8 2515 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms