RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 UBE2AP49459 152 aa10.31□□□□□ -0.76
SLX4-202ENST00000466154 TNP2Q05952 138 aa10.3□□□□□ -0.76
SLX4-202ENST00000466154 A0A087WSZ3 146 aa10.29□□□□□ -0.76
SLX4-202ENST00000466154 TMEM254Q8TBM7 123 aa10.29□□□□□ -0.76
SLX4-202ENST00000466154 K7EQZ3 153 aa10.28□□□□□ -0.76
SLX4-202ENST00000466154 IGFL1Q6UW32 110 aa10.28□□□□□ -0.76
SLX4-202ENST00000466154 LRCOL1A6NCL2 159 aa10.28□□□□□ -0.76
SLX4-202ENST00000466154 SEC61GP60059 68 aa10.28□□□□□ -0.76
SLX4-202ENST00000466154 EPM2AB3EWF7 344 aa10.27□□□□□ -0.77
SLX4-202ENST00000466154 CNBPP62633 177 aaKnown RBP10.27□□□□□ -0.77
SLX4-202ENST00000466154 C1orf195Q5TG92 126 aa10.27□□□□□ -0.77
SLX4-202ENST00000466154 BCE1O60756 84 aa10.26□□□□□ -0.77
SLX4-202ENST00000466154 KLKP1Q107X0 134 aa10.26□□□□□ -0.77
SLX4-202ENST00000466154 V9GYY9 64 aa10.26□□□□□ -0.77
SLX4-202ENST00000466154 FP248Q71RG6 208 aaPredicted RBP10.25□□□□□ -0.77
SLX4-202ENST00000466154 PANO1I0J062 215 aa10.25□□□□□ -0.77
SLX4-202ENST00000466154 C14orf177Q52M58 125 aa10.25□□□□□ -0.77
SLX4-202ENST00000466154 SERP1Q9Y6X1 66 aa10.25□□□□□ -0.77
SLX4-202ENST00000466154 NBDYA0A0U1RRE5 68 aa10.24□□□□□ -0.77
SLX4-202ENST00000466154 RPL37AP61513 92 aaKnown RBP10.24□□□□□ -0.77
SLX4-202ENST00000466154 WFDC13Q8IUB5 93 aa10.23□□□□□ -0.77
SLX4-202ENST00000466154 B9D2Q9BPU9 175 aa10.23□□□□□ -0.77
SLX4-202ENST00000466154 DSCR10P59022 87 aa10.22□□□□□ -0.77
SLX4-202ENST00000466154 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
SLX4-202ENST00000466154 PLECQ15149 4684 aaKnown RBP10.21□□□□□ -0.77
SLX4-202ENST00000466154 OCR1Q9BZK8 76 aa10.21□□□□□ -0.77
SLX4-202ENST00000466154 SMIM26A0A096LP01 95 aa10.2□□□□□ -0.78
SLX4-202ENST00000466154 C9orf163Q8N9P6 203 aa10.19□□□□□ -0.78
SLX4-202ENST00000466154 IGLV9-49A0A0B4J1Y8 123 aa10.16□□□□□ -0.78
SLX4-202ENST00000466154 NUPR2A6NF83 97 aa10.16□□□□□ -0.78
SLX4-202ENST00000466154 FAM229BQ4G0N7 80 aa10.16□□□□□ -0.78
SLX4-202ENST00000466154 TGP01266 2768 aa10.15□□□□□ -0.78
SLX4-202ENST00000466154 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.15□□□□□ -0.78
SLX4-202ENST00000466154 A0A1B0GW54 56 aa10.13□□□□□ -0.79
SLX4-202ENST00000466154 HCG22E2RYF7 251 aa10.13□□□□□ -0.79
SLX4-202ENST00000466154 PRR4Q16378 134 aa10.13□□□□□ -0.79
SLX4-202ENST00000466154 NDUFC1O43677 76 aa10.12□□□□□ -0.79
SLX4-202ENST00000466154 H0Y9J4 135 aa10.09□□□□□ -0.79
SLX4-202ENST00000466154 STARD9Q9P2P6 4700 aa10.09□□□□□ -0.79
SLX4-202ENST00000466154 ANAPC11Q9NYG5 84 aa10.09□□□□□ -0.79
SLX4-202ENST00000466154 Q6ZRN7 208 aaPredicted RBP10.08□□□□□ -0.8
SLX4-202ENST00000466154 MEGF8Q7Z7M0 2845 aa10.05□□□□□ -0.8
SLX4-202ENST00000466154 A0A087WTM6 91 aa10.05□□□□□ -0.8
SLX4-202ENST00000466154 PSPHP1O15172 72 aa10.05□□□□□ -0.8
SLX4-202ENST00000466154 PRKDCP78527 4128 aaKnown RBP10.04□□□□□ -0.8
SLX4-202ENST00000466154 RTL8CO15255 209 aa10.03□□□□□ -0.8
SLX4-202ENST00000466154 IGLV8-61A0A075B6I0 122 aa10.02□□□□□ -0.81
SLX4-202ENST00000466154 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
SLX4-202ENST00000466154 KMT2AQ03164 3969 aa10.01□□□□□ -0.81
SLX4-202ENST00000466154 CASC2Q6XLA1 102 aa10.01□□□□□ -0.81
SLX4-202ENST00000466154 LY6G6CO95867 125 aa10□□□□□ -0.81
SLX4-202ENST00000466154 LINC00208Q96KT6 92 aa9.99□□□□□ -0.81
SLX4-202ENST00000466154 PSORS1C2Q9UIG4 136 aa9.98□□□□□ -0.81
SLX4-202ENST00000466154 MOBPQ13875 183 aa9.97□□□□□ -0.81
SLX4-202ENST00000466154 IGLV5-52A0A0A0MRZ9 124 aa9.96□□□□□ -0.81
SLX4-202ENST00000466154 SPRR1BP22528 89 aa9.96□□□□□ -0.81
SLX4-202ENST00000466154 MP68P56378 58 aa9.96□□□□□ -0.81
SLX4-202ENST00000466154 ATP5EP56381 51 aaPredicted RBP9.96□□□□□ -0.81
SLX4-202ENST00000466154 PRR15Q8IV56 129 aa9.96□□□□□ -0.82
SLX4-202ENST00000466154 FRAS1Q86XX4 4008 aa9.95□□□□□ -0.82
SLX4-202ENST00000466154 A8MWP4 228 aa9.94□□□□□ -0.82
SLX4-202ENST00000466154 PMAIP1Q13794 54 aa9.94□□□□□ -0.82
SLX4-202ENST00000466154 LINC00472Q9H8W2 130 aa9.94□□□□□ -0.82
SLX4-202ENST00000466154 KRTAP13-1Q8IUC0 172 aa9.93□□□□□ -0.82
SLX4-202ENST00000466154 DYNC2H1Q8NCM8 4307 aaKnown RBP9.92□□□□□ -0.82
SLX4-202ENST00000466154 NDUFB1O75438 58 aa9.92□□□□□ -0.82
SLX4-202ENST00000466154 DNHD1Q96M86 4753 aa9.92□□□□□ -0.82
SLX4-202ENST00000466154 H0Y9P7 68 aa9.92□□□□□ -0.82
SLX4-202ENST00000466154 C1orf134Q5TEV5 83 aa9.91□□□□□ -0.82
SLX4-202ENST00000466154 NDUFS5O43920 106 aa9.91□□□□□ -0.82
SLX4-202ENST00000466154 SPINK6Q6UWN8 80 aa9.9□□□□□ -0.82
SLX4-202ENST00000466154 IGHV6-1A0A0B4J1U7 121 aa9.9□□□□□ -0.83
SLX4-202ENST00000466154 A8MU10 97 aa9.89□□□□□ -0.83
SLX4-202ENST00000466154 C1orf64Q8NEQ6 169 aa9.88□□□□□ -0.83
SLX4-202ENST00000466154 LCE6AA0A183 80 aa9.87□□□□□ -0.83
SLX4-202ENST00000466154 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
SLX4-202ENST00000466154 VPS13DQ5THJ4 4388 aa9.86□□□□□ -0.83
SLX4-202ENST00000466154 hDV103S1A0JD37 113 aa9.86□□□□□ -0.83
SLX4-202ENST00000466154 ZCCHC13Q8WW36 166 aaKnown RBP9.86□□□□□ -0.83
SLX4-202ENST00000466154 DNAH2Q9P225 4427 aa9.86□□□□□ -0.83
SLX4-202ENST00000466154 CDK2AP2O75956 126 aa9.86□□□□□ -0.83
SLX4-202ENST00000466154 SPTSSBQ8NFR3 76 aa9.86□□□□□ -0.83
SLX4-202ENST00000466154 HECTD4Q9Y4D8 3996 aa9.86□□□□□ -0.83
SLX4-202ENST00000466154 CIRBP-AS1Q8TBR5 109 aa9.84□□□□□ -0.83
SLX4-202ENST00000466154 ZNF861PO60384 105 aa9.84□□□□□ -0.83
SLX4-202ENST00000466154 Q6ZR54 194 aa9.84□□□□□ -0.83
SLX4-202ENST00000466154 FBN3Q75N90 2809 aa9.84□□□□□ -0.83
SLX4-202ENST00000466154 ZNF706Q9Y5V0 76 aaPredicted RBP9.84□□□□□ -0.83
SLX4-202ENST00000466154 MMP24-AS1A0A0U1RRL7 71 aa9.83□□□□□ -0.84
SLX4-202ENST00000466154 WWC2-AS2Q96NR7 200 aa9.83□□□□□ -0.84
SLX4-202ENST00000466154 PCOTHQ58A44 107 aa9.82□□□□□ -0.84
SLX4-202ENST00000466154 TRAV22A0A0B4J277 110 aa9.82□□□□□ -0.84
SLX4-202ENST00000466154 PLAC8Q9NZF1 115 aa9.8□□□□□ -0.84
SLX4-202ENST00000466154 Q96NJ1 140 aa9.79□□□□□ -0.84
SLX4-202ENST00000466154 A8MUN3 132 aa9.78□□□□□ -0.84
SLX4-202ENST00000466154 KRTAP10-2P60368 255 aa9.77□□□□□ -0.85
SLX4-202ENST00000466154 LINC00483Q53H64 154 aa9.77□□□□□ -0.85
SLX4-202ENST00000466154 DNAH8Q96JB1 4490 aa9.76□□□□□ -0.85
SLX4-202ENST00000466154 C8orf17Q9NRJ1 99 aa9.76□□□□□ -0.85
SLX4-202ENST00000466154 A0A087X002 238 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms