RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 PPDPFQ9H3Y8 114 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 KCNQ1DNQ9H478 68 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 SPANXB1Q9NS25 103 aaPredicted RBP2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 SPANXCQ9NY87 97 aa2.78□□□□□ -1.96
EXOSC3-204ENST00000465860 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
EXOSC3-204ENST00000465860 IGLV6-57P01721 117 aa2.77□□□□□ -1.97
EXOSC3-204ENST00000465860 PCP2Q8IVA1 136 aa2.77□□□□□ -1.97
EXOSC3-204ENST00000465860 SPRR4Q96PI1 79 aa2.77□□□□□ -1.97
EXOSC3-204ENST00000465860 Q9BRP9 147 aa2.77□□□□□ -1.97
EXOSC3-204ENST00000465860 HIGD2AQ9BW72 106 aa2.77□□□□□ -1.97
EXOSC3-204ENST00000465860 TRBV10-2A0A0K0K1G8 114 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 TSTD3H0UI37 97 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 NDUFC2O95298 119 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 CRYGAP11844 174 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 DDTP30046 118 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 RPL13AP40429 203 aaKnown RBP2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 LINC00518Q8N0U6 118 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 TYMSOSQ8TAI1 123 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 LINC00308Q8TCZ7 52 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 HIST1H4GQ99525 98 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 RETNLBQ9BQ08 111 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 HIGD1BQ9P298 99 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 UQCR10Q9UDW1 63 aa2.76□□□□□ -1.97
EXOSC3-204ENST00000465860 HSD52Q0P140 79 aa2.75□□□□□ -1.97
EXOSC3-204ENST00000465860 TAL2Q16559 108 aa2.75□□□□□ -1.97
EXOSC3-204ENST00000465860 FAM229BQ4G0N7 80 aa2.75□□□□□ -1.97
EXOSC3-204ENST00000465860 S100A7L2Q5SY68 101 aa2.75□□□□□ -1.97
EXOSC3-204ENST00000465860 Q6ZVQ6 151 aa2.75□□□□□ -1.97
EXOSC3-204ENST00000465860 LINC00337Q8N6G1 96 aa2.75□□□□□ -1.97
EXOSC3-204ENST00000465860 C14orf144Q96I85 54 aa2.75□□□□□ -1.97
EXOSC3-204ENST00000465860 TRAV13-2A0A0B4J235 113 aa2.74□□□□□ -1.97
EXOSC3-204ENST00000465860 LOC105371267A0A1B0GV96 52 aa2.74□□□□□ -1.97
EXOSC3-204ENST00000465860 ETDCA0A1B0GVM5 59 aa2.74□□□□□ -1.97
EXOSC3-204ENST00000465860 HINT1P49773 126 aaPredicted RBP2.74□□□□□ -1.97
EXOSC3-204ENST00000465860 Q6ZRX8 168 aa2.74□□□□□ -1.97
EXOSC3-204ENST00000465860 ST20-AS1Q8NBB2 130 aa2.74□□□□□ -1.97
EXOSC3-204ENST00000465860 C12orf57Q99622 126 aa2.74□□□□□ -1.97
EXOSC3-204ENST00000465860 TRAV23DV6A0A075B6W5 121 aa2.73□□□□□ -1.97
EXOSC3-204ENST00000465860 M0R143 59 aa2.73□□□□□ -1.97
EXOSC3-204ENST00000465860 ZNF73O43830 326 aaPredicted RBP2.73□□□□□ -1.97
EXOSC3-204ENST00000465860 PRR4Q16378 134 aa2.73□□□□□ -1.97
EXOSC3-204ENST00000465860 KRTAP13-3Q3SY46 172 aa2.73□□□□□ -1.97
EXOSC3-204ENST00000465860 LINC00483Q53H64 154 aa2.73□□□□□ -1.97
EXOSC3-204ENST00000465860 MUSTN1Q8IVN3 82 aa2.73□□□□□ -1.97
EXOSC3-204ENST00000465860 LINC00304Q8N9R0 145 aa2.73□□□□□ -1.97
EXOSC3-204ENST00000465860 OR13C6PQ8NH95 151 aa2.73□□□□□ -1.97
EXOSC3-204ENST00000465860 A0A0B4J2C4 111 aa2.72□□□□□ -1.97
EXOSC3-204ENST00000465860 A6NDN8 102 aa2.72□□□□□ -1.97
EXOSC3-204ENST00000465860 C2orf91Q6ZV80 131 aa2.72□□□□□ -1.97
EXOSC3-204ENST00000465860 RAB37Q96AX2 223 aa2.72□□□□□ -1.97
EXOSC3-204ENST00000465860 SNCGO76070 127 aa2.71□□□□□ -1.98
EXOSC3-204ENST00000465860 VAMP3Q15836 100 aa2.71□□□□□ -1.98
EXOSC3-204ENST00000465860 CEND1Q8N111 149 aa2.71□□□□□ -1.98
EXOSC3-204ENST00000465860 Q8NBF4 154 aa2.71□□□□□ -1.98
EXOSC3-204ENST00000465860 FAM218AQ96MZ4 157 aa2.71□□□□□ -1.98
EXOSC3-204ENST00000465860 PRO1933Q9H354 126 aa2.71□□□□□ -1.98
EXOSC3-204ENST00000465860 NHP2Q9NX24 153 aaKnown RBP2.71□□□□□ -1.98
EXOSC3-204ENST00000465860 A0A1B0GWB2 263 aa2.7□□□□□ -1.98
EXOSC3-204ENST00000465860 ELOF1P60002 83 aaKnown RBP2.7□□□□□ -1.98
EXOSC3-204ENST00000465860 MOBPQ13875 183 aa2.7□□□□□ -1.98
EXOSC3-204ENST00000465860 Q1RN00 199 aa2.7□□□□□ -1.98
EXOSC3-204ENST00000465860 C6orf99Q4VX62 202 aa2.7□□□□□ -1.98
EXOSC3-204ENST00000465860 LYRM7Q5U5X0 104 aa2.7□□□□□ -1.98
EXOSC3-204ENST00000465860 ZNF706Q9Y5V0 76 aaPredicted RBP2.7□□□□□ -1.98
EXOSC3-204ENST00000465860 A0A0G2JQZ4 141 aa2.69□□□□□ -1.98
EXOSC3-204ENST00000465860 TRBV7-6A0A0J9YX20 115 aa2.69□□□□□ -1.98
EXOSC3-204ENST00000465860 SLC25A20O43772 301 aa2.69□□□□□ -1.98
EXOSC3-204ENST00000465860 FXYD2P54710 66 aa2.69□□□□□ -1.98
EXOSC3-204ENST00000465860 BVES-AS1Q5T3Y7 98 aa2.69□□□□□ -1.98
EXOSC3-204ENST00000465860 Q8N377 158 aa2.69□□□□□ -1.98
EXOSC3-204ENST00000465860 SMIM11BQ8TCY0 68 aa2.69□□□□□ -1.98
EXOSC3-204ENST00000465860 DHRS4-AS1Q9P1J3 65 aa2.69□□□□□ -1.98
EXOSC3-204ENST00000465860 PRO1854Q9UHT4 67 aa2.69□□□□□ -1.98
EXOSC3-204ENST00000465860 A8MU10 97 aa2.68□□□□□ -1.98
EXOSC3-204ENST00000465860 H7C2G1 150 aa2.68□□□□□ -1.98
EXOSC3-204ENST00000465860 COX6CP09669 75 aa2.68□□□□□ -1.98
EXOSC3-204ENST00000465860 SPRR1BP22528 89 aa2.68□□□□□ -1.98
EXOSC3-204ENST00000465860 COX7BP24311 80 aa2.68□□□□□ -1.98
EXOSC3-204ENST00000465860 CTAG1AP78358 180 aa2.68□□□□□ -1.98
EXOSC3-204ENST00000465860 H0YGX0 51 aa2.67□□□□□ -1.98
EXOSC3-204ENST00000465860 PSMB2P49721 201 aa2.67□□□□□ -1.98
EXOSC3-204ENST00000465860 HRCT1Q6UXD1 115 aa2.67□□□□□ -1.98
EXOSC3-204ENST00000465860 SSBP3-AS1Q7Z2R9 100 aa2.67□□□□□ -1.98
EXOSC3-204ENST00000465860 DEFB105AQ8NG35 78 aa2.67□□□□□ -1.98
EXOSC3-204ENST00000465860 FAT4Q6V0I7 4981 aa2.67□□□□□ -1.98
EXOSC3-204ENST00000465860 K7ERJ3 54 aa2.66□□□□□ -1.98
EXOSC3-204ENST00000465860 DNAL4O96015 105 aa2.66□□□□□ -1.98
EXOSC3-204ENST00000465860 BATFQ16520 125 aa2.66□□□□□ -1.98
EXOSC3-204ENST00000465860 TPRXLQ17RH7 258 aa2.66□□□□□ -1.98
EXOSC3-204ENST00000465860 C9orf153Q5TBE3 101 aa2.66□□□□□ -1.98
EXOSC3-204ENST00000465860 SPAG11AQ6PDA7 123 aa2.66□□□□□ -1.98
EXOSC3-204ENST00000465860 KRTAP4-1Q9BYQ7 146 aa2.66□□□□□ -1.98
EXOSC3-204ENST00000465860 IGLV5-48A0A075B6I7 105 aa2.65□□□□□ -1.99
EXOSC3-204ENST00000465860 A0A1B0GX51 115 aa2.65□□□□□ -1.99
EXOSC3-204ENST00000465860 H3BQ85 93 aa2.65□□□□□ -1.99
EXOSC3-204ENST00000465860 SPINK1P00995 79 aa2.65□□□□□ -1.99
EXOSC3-204ENST00000465860 TEX49A0A1B0GTD5 131 aa2.64□□□□□ -1.99
EXOSC3-204ENST00000465860 hADV29S1A0JD25 119 aa2.64□□□□□ -1.99
EXOSC3-204ENST00000465860 F8WEM9 126 aa2.64□□□□□ -1.99
EXOSC3-204ENST00000465860 SCGB1C2P0DMR2 95 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms