RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 CACNA1BQ00975 2339 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 NOTCH3Q9UM47 2321 aa0.46□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH5Q8TE73 4624 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 CNOT1A5YKK6 2376 aaKnown RBP0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 TPRP12270 2363 aaKnown RBP0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 WNK1Q9H4A3 2382 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 SPART-AS1P0CW21 52 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP12-2P59991 146 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP13-4Q3LI77 160 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 LINC01556Q5JQF7 62 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 XP32Q5T750 250 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP7-1Q8IUC3 87 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 PTPRZ1P23471 2315 aaPredicted RBP0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 TRRAPQ9Y4A5 3859 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 BRCA2P51587 3418 aa0.45□□□□□ -2.34
RPL39P28-201ENST00000465655 LAMA2P24043 3122 aaKnown RBP0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 PLECQ15149 4684 aaKnown RBP0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 RELNP78509 3460 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 TRIOO75962 3097 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 BOD1L1Q8NFC6 3051 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH7Q8WXX0 4024 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 FAT3Q8TDW7 4589 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 IGF2RP11717 2491 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DMXL1Q9Y485 3027 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH3Q8TD57 4116 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 SPTBN2O15020 2390 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 LCE2CQ5TA81 110 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DEFB123Q8N688 67 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP3-1Q9BYR8 98 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 PRKDCP78527 4128 aaKnown RBP0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 LOC400499M0QZD8 3231 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 AKAP6Q13023 2319 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 PCNX1Q96RV3 2341 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 ANKRD17O75179 2603 aaKnown RBP0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH6Q9C0G6 4158 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 CEP250Q9BV73 2442 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 VPS13CQ709C8 3753 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DYNC1H1Q14204 4646 aaKnown RBP0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 DNAH12Q6ZR08 3092 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 CHD6Q8TD26 2715 aa0.44□□□□□ -2.34
RPL39P28-201ENST00000465655 GPR179Q6PRD1 2367 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 LAMA3Q16787 3333 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 ACACAQ13085 2346 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 ASH1LQ9NR48 2969 aaKnown RBP0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 TENM2Q9NT68 2774 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 CELSR2Q9HCU4 2923 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 PKDREJQ9NTG1 2253 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 C9orf92A6NGG3 77 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 LORP23490 312 aaPredicted RBP0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP12-1P59990 96 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP19-4Q3LI73 84 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 LCE2AQ5TA79 106 aaPredicted RBP0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 MAPK1IP1LQ8NDC0 245 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 CELSR1Q9NYQ6 3014 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 EP400Q96L91 3159 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 F8P00451 2351 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 CSMD3Q7Z407 3707 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 CSPG4Q6UVK1 2322 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 NBEAQ8NFP9 2946 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 COL12A1Q99715 3063 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 VCANP13611 3396 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 FREM2Q5SZK8 3169 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 CUBNO60494 3623 aa0.43□□□□□ -2.34
RPL39P28-201ENST00000465655 PKD1P98161 4303 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 VPS13BQ7Z7G8 4022 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 CRYBG3Q68DQ2 2970 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 OTOGQ6ZRI0 2925 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 PKHD1L1Q86WI1 4243 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 HECTD4Q9Y4D8 3996 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 M0QZ58 72 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 LCE2BO14633 110 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 KALRNO60229 2985 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP10-6P60371 365 aaPredicted RBP0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 DEFB124Q8NES8 71 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 FRYQ5TBA9 3013 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 DMXL2Q8TDJ6 3036 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 OTOGLQ3ZCN5 2332 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 HTTP42858 3142 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 MYO15AQ9UKN7 3530 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 NCOR1O75376 2440 aa0.42□□□□□ -2.34
RPL39P28-201ENST00000465655 LAMA1P25391 3075 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 ASPMQ8IZT6 3477 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 C2CD3Q4AC94 2353 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 ZNF469Q96JG9 3925 aaPredicted RBP0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 APC2O95996 2303 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 HSPG2P98160 4391 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 ATMQ13315 3056 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 SPTA1P02549 2419 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 HIVEP2P31629 2446 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 H3BNG1 76 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP13-2Q52LG2 175 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 KRTAP13-1Q8IUC0 172 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 PIEZO2Q9H5I5 2752 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 DSPP15924 2871 aaKnown RBP0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 PRRC2CQ9Y520 2896 aaKnown RBP0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 KMT2AQ03164 3969 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 MAP1BP46821 2468 aaKnown RBP0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 SPTBN4Q9H254 2564 aa0.41□□□□□ -2.34
RPL39P28-201ENST00000465655 CDH23Q9H251 3354 aa0.4□□□□□ -2.34
RPL39P28-201ENST00000465655 FAT1Q14517 4588 aa0.4□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms